Reactome | SDC1 [plasma membrane]

SDC1 [plasma membrane]

Stable Identifier

R-GGA-2076691

Type

Protein [EntityWithAccessionedSequence]

Species

Gallus gallus

Compartment

plasma membrane

Synonyms

HS(3)-SDC1, F1NV24

Locations in the PathwayBrowser

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Metabolism (Gallus gallus)

- Metabolism of carbohydrates and carbohydrate derivatives (Gallus gallus)
  - Glycosaminoglycan metabolism (Gallus gallus)
    - Heparan sulfate/heparin (HS-GAG) metabolism (Gallus gallus)
      - HS-GAG biosynthesis (Gallus gallus)
        
        Some HSPGs are secreted to the plasma membrane (Gallus gallus)
        
        HSPGs [plasma membrane] (Gallus gallus)
        
        HS(3)-PGs [plasma membrane] (Gallus gallus)
        
        SDC1 [plasma membrane] (Gallus gallus)

External Reference Information

External Reference

UniProt:F1NV24

Gene Names

SDC1

Reference Genes

BioGPS Gene:421960 SDC1

ENSEMBL:ENSGALG00000016480

KEGG:gga:421960 SDC1

Monarch:421960 SDC1

NCBI Entrez Gene:421960 SDC1

UCSC:F1NV24 SDC1

Reference Transcript

RefSeq:XM_419972.7 SDC1

Other Identifiers

421960

GO:0005576

GO:0005886

GO:0006898

GO:0009897

GO:0009986

GO:0016020

GO:0016192

GO:0016477

GO:0038024

GO:0042802

GO:0048627

GO:0048856

GO:0048870

GO:0055002

GO:0060070

GO:1903543

GO:1903553

GT_A_87_P019380

GT_A_87_P149878

Gga.6597.1.S1_at

Participates

as a member of

HS(3)-PGs [plasma membrane] (Gallus gallus)

Other forms of this molecule

SDC1 [plasma membrane]

SDC1 [Golgi lumen]

SDC1 [lysosomal lumen]

Inferred From

HS(3)-SDC1 [plasma membrane] (Homo sapiens)

Modified Residues

Name

O-xylosyl-L-serine (ChEBI:63654) at unknown position

Modification

beta-D-GlcA-(1->4)-alpha-D-GlcNS-(1->4)-beta-D-IdoA2S-(1->4)-alpha-D-GlcNS-(1->4)-beta-D-GlcA-(1->3)-beta-D-Gal-(1->3)-beta-D-Gal-(1->4)-beta-D-Xyl-yl group

PsiMod Name

O-xylosyl-L-serine

PsiMod Definition

A protein modification that effectively converts an L-serine residue to O3-xylosylserine.

Cross References

RefSeq

XP_419972.2

ENSEMBL

ENSGALG00010007999, ENSGALP00010010615, ENSGALT00010019066

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