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H3-X [nucleoplasm]
Stable Identifier
R-GGA-8936573
Type
Protein [EntityWithAccessionedSequence]
Species
Gallus gallus
Compartment
nucleoplasm
Synonyms
Me2K5,Me2aR2-H3F3A, P84247
Locations in the PathwayBrowser
Expand all
Gene expression (Transcription) (Gallus gallus)
RNA Polymerase II Transcription (Gallus gallus)
Generic Transcription Pathway (Gallus gallus)
Transcriptional regulation by RUNX1 (Gallus gallus)
RUNX1 regulates genes involved in megakaryocyte differentiation and platelet function (Gallus gallus)
PRMT6 arginine methylates H3K4me2-Nucleosome at the GP1BA gene promoter (Gallus gallus)
RUNX1:CBFB:SIN3A,(SIN3B):PRMT6:HDAC1:GP1BA gene:H3K4me2,H3R2me2a-Nucleosome [nucleoplasm] (Gallus gallus)
Nucleosome with H3K4me2 and H3R2me2a [nucleoplasm] (Gallus gallus)
Histone H3 (H3K4me2,H3R2Me2a) [nucleoplasm] (Gallus gallus)
H3-X [nucleoplasm] (Gallus gallus)
PRMT6 arginine methylates H3K4me2-Nucleosome at the ITGA2B gene promoter (Gallus gallus)
RUNX1:CBFB:SIN3A,(SIN3B):PRMT6:HDAC1:ITGA2B gene:H3K4me2,H3R2me2a-Nucleosome [nucleoplasm] (Gallus gallus)
Nucleosome with H3K4me2 and H3R2me2a [nucleoplasm] (Gallus gallus)
Histone H3 (H3K4me2,H3R2Me2a) [nucleoplasm] (Gallus gallus)
H3-X [nucleoplasm] (Gallus gallus)
PRMT6 arginine methylates H3K4me2-Nucleosome at the MIR27A gene promoter (Gallus gallus)
RUNX1:CBFB:SIN3A,(SIN3B):PRMT6:HDAC1:MIR27A gene:H3K4me2,H3R2me2a-Nucleosome [nucleoplasm] (Gallus gallus)
Nucleosome with H3K4me2 and H3R2me2a [nucleoplasm] (Gallus gallus)
Histone H3 (H3K4me2,H3R2Me2a) [nucleoplasm] (Gallus gallus)
H3-X [nucleoplasm] (Gallus gallus)
PRMT6 arginine methylates H3K4me2-Nucleosome at the THBS1 gene promoter (Gallus gallus)
RUNX1:CBFB:SIN3A,(SIN3B):PRMT6:HDAC1:THBS1B gene:H3K4me2,H3R2me2a-Nucleosome [nucleoplasm] (Gallus gallus)
Nucleosome with H3K4me2 and H3R2me2a [nucleoplasm] (Gallus gallus)
Histone H3 (H3K4me2,H3R2Me2a) [nucleoplasm] (Gallus gallus)
H3-X [nucleoplasm] (Gallus gallus)
External Reference Information
External Reference
UniProt:P84247
Gene Names
H3-X
Reference Genes
BioGPS Gene:396233 H3-X
BioGPS Gene:427887 H3-X
ENSEMBL:ENSGALG00000002286
ENSEMBL:ENSGALG00000020078 H3-X
ENSEMBL:ENSGALG00000054599 H3-X
ENSEMBL:ENSGALG00010008224.1 H3-X
ENSEMBL:ENSGALG00010017538.1 H3-X
ENSEMBL:ENSGALG00010029787.1 H3-X
ENSEMBL:ENSGALG00015001201 H3-X
ENSEMBL:ENSGALG00015006073 H3-X
ENSEMBL:ENSGALG00015024464 H3-X
KEGG Gene (Gallus gallus):396233 H3-X
KEGG Gene (Gallus gallus):427887 H3-X
Monarch:396233 H3-X
Monarch:427887 H3-X
NCBI Gene:396233 H3-X
NCBI Gene:427887 H3-X
Reference Transcript
RefSeq:NM_001031482.2 H3-X
RefSeq:NM_205296.1 H3-X
Other Identifiers
100859629
396233
427887
GO:0000786
GO:0003677
GO:0005198
GO:0005634
GO:0005694
GO:0030527
GO:0043226
GO:0046982
GT_A_87_P008765
GT_A_87_P052556
GT_A_87_P097636
GT_A_87_P118138
GT_A_87_P189338
GT_Sp_Chicken_CO762256_7770
GT_Xhyb_Chicken_CN219025_1269
GT_Xhyb_Chicken_CN222993_2538
GT_Xhyb_Chicken_CN233395_3436
Gga.12912.1.S1_at
Gga.4770.1.S1_at
Gga.5274.1.S1_at
Gga.5274.2.S1_a_at
Participates
as a member of
Histone H3 (H3K4me2,H3R2Me2a) [nucleoplasm] (Gallus gallus)
Other forms of this molecule
H3-X [nucleoplasm]
H3-X [nucleoplasm]
H3-X [nucleoplasm]
phospho-H3-X [nucleoplasm]
phospho-H3-X [nucleoplasm]
H3-X [nucleoplasm]
H3-X [nucleoplasm]
H3-X [nucleoplasm]
H3-X [nucleoplasm]
H3-X [nucleoplasm]
H3-X [nucleoplasm]
phospho-H3-X [nucleoplasm]
H3-X [nucleoplasm]
Inferred From
Me2K5,Me2aR2-H3F3A [nucleoplasm]
(Homo sapiens)
Modified Residues
Name
N6,N6-dimethyl-L-lysine at 5 (in Homo sapiens)
Coordinate
5
PsiMod Name
N6,N6-dimethyl-L-lysine [MOD:00084]
PsiMod Definition
A protein modification that effectively converts an L-lysine residue to N6,N6-dimethyl-L-lysine.
Name
asymmetric dimethyl-L-arginine at 3 (in Homo sapiens)
Coordinate
3
PsiMod Name
asymmetric dimethyl-L-arginine
PsiMod Definition
A protein modification that effectively converts an L-arginine residue to asymmetric dimethylarginine, N(omega),N(omega)-dimethyl-L-arginine.
Cross References
RefSeq
NP_990627.1
,
NP_001026653.2
Ensembl
ENSGALG00010008224
,
ENSGALT00010072060
,
ENSGALG00010017538
,
ENSGALP00010011211
,
ENSGALP00010024885
,
ENSGALP00010044750
,
ENSGALT00010019662
,
ENSGALG00010029787
,
ENSGALT00010042395
PRO
P84247
PDB
1PDQ
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