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SNRPF [cytosol]
Stable Identifier
R-HSA-191852
Type
Protein [EntityWithAccessionedSequence]
Species
Homo sapiens
Compartment
cytosol
Synonyms
Sm protein F, snRNP F, RUXF_HUMAN, Small nuclear ribonucleoprotein F, snRNP-F, Sm-F, SmF
Locations in the PathwayBrowser for interactor UniProt:Q16637%20SMN1
Expand all
Metabolism of RNA (Homo sapiens)
Metabolism of non-coding RNA (Homo sapiens)
snRNP Assembly (Homo sapiens)
Loading and methylation of Sm proteins onto SMN Complexes (Homo sapiens)
SNRPF [cytosol] (Homo sapiens)
External Reference Information
External Reference
UniProt:P62306 SNRPF
Gene Names
SNRPF, PBSCF
Chain
initiator methionine:, chain:2-86
Reference Genes
BioGPS Gene:6636 SNRPF
COSMIC (genes):SNRPF SNRPF
CTD Gene:6636 SNRPF
dbSNP Gene:6636 SNRPF
ENSEMBL:ENSG00000139343 SNRPF
ENSEMBL_homo_sapiens_GENE:ENSG00000139343.11 SNRPF
HGNC:11162 SNRPF
KEGG Gene (Homo sapiens):6636 SNRPF
Monarch:6636 SNRPF
NCBI Gene:6636 SNRPF
OMIM:603541 SNRPF
UCSC:P62306 SNRPF
Reference Transcript
RefSeq:NM_003095.2 SNRPF
Other Identifiers
11717013_a_at
11717014_x_at
11753840_x_at
11763977_x_at
203832_PM_at
203832_at
3427016
3427017
3427018
3427019
3427021
3427023
3427024
3909005
3909010
41403_at
6636
7957649
A_23_P117068
A_24_P504405
GE60100
GO:0000387
GO:0000398
GO:0003723
GO:0005515
GO:0005634
GO:0005654
GO:0005681
GO:0005682
GO:0005683
GO:0005685
GO:0005686
GO:0005687
GO:0005689
GO:0005737
GO:0005829
GO:0006397
GO:0008380
GO:0016071
GO:0030532
GO:0034709
GO:0034715
GO:0034719
GO:0036261
GO:0043226
GO:0043229
GO:0046540
GO:0065003
GO:0071005
GO:0071007
GO:0071013
GO:0120114
GO:1903241
GO:1990904
HMNXSV003050943
ILMN_2067370
X85372_at
g4507130_3p_at
g4507130_3p_x_at
Participates
as an input of
Loading and methylation of Sm proteins onto SMN Complexes (Homo sapiens)
as a component of
snRNP Sm core complex [cytosol] (Homo sapiens)
Other forms of this molecule
SNRPF [nucleoplasm]
Inferred To
Homologues of SNRPF [cytosol]
(Canis familiaris)
SMX3 [cytosol]
(Saccharomyces cerevisiae)
SNRPF [cytosol]
(Bos taurus)
SNRPF [cytosol]
(Canis familiaris)
SNRPF [cytosol]
(Gallus gallus)
SNRPF [cytosol]
(Plasmodium falciparum)
SNRPF [cytosol]
(Sus scrofa)
SmF [cytosol]
(Drosophila melanogaster)
Snrpf [cytosol]
(Mus musculus)
Snrpf [cytosol]
(Rattus norvegicus)
smf1 [cytosol]
(Schizosaccharomyces pombe)
snrpf [cytosol]
(Dictyostelium discoideum)
snrpf [cytosol]
(Xenopus tropicalis)
snrpfl [cytosol]
(Danio rerio)
snr-5 [cytosol]
(Caenorhabditis elegans)
Cross References
RefSeq
NP_003086.1
OpenTargets
ENSG00000139343
HPA
ENSG00000139343-SNRPF
GeneCards
P62306
Ensembl
ENSG00000139343
,
ENSP00000266735
,
ENST00000266735
PRO
P62306
Pharos - Targets
P62306
PDB
7VPX
,
5XJT
,
7DVQ
,
6QX9
,
7ABI
,
4PJO
,
8C6J
,
7W5B
,
5XJS
,
3PGW
,
5Z57
,
6FF7
,
6V4X
,
6ICZ
,
4WZJ
,
6QW6
,
5XJC
,
7EVO
,
6ID0
,
5O9Z
,
6Y5Q
,
7W5A
,
5Z58
,
5XJU
,
7B0Y
,
5XJL
,
6AH0
,
6Y53
,
5MQF
,
6ID1
,
8CH6
,
7W59
,
7A5P
,
6QDV
,
5XJR
,
4V98
,
5YZG
,
8HK1
,
5Z56
,
7ABG
,
7QTT
,
4F7U
,
5XJQ
,
3JCR
,
3CW1
Interactors (25)
Accession
#Entities
Entities
Confidence Score
Evidence (IntAct)
UniProt:P62304 SNRPE
2
SNRPE [nucleoplasm]
(R-HSA-71905)
SNRPE [cytosol]
(R-HSA-191782)
0.867
11
UniProt:Q9Y4Y9 LSM5
2
LSM5 [cytosol]
(R-HSA-429839)
LSM5 [nucleoplasm]
(R-HSA-6806795)
0.841
11
UniProt:P62316 SNRPD2
2
SNRPD2 [nucleoplasm]
(R-HSA-71901)
SNRPD2 [cytosol]
(R-HSA-191810)
0.801
11
UniProt:O14893 GEMIN2
2
GEMIN2 [nucleoplasm]
(R-HSA-191795)
GEMIN2 [cytosol]
(R-HSA-191835)
0.786
11
UniProt:P38432 COIL
0.718
6
UniProt:Q9NSC5 HOMER3
1
HOMER3 [cytosol]
(R-HSA-6794236)
0.718
9
UniProt:P54105 CLNS1A
1
CLNS1A [cytosol]
(R-HSA-191796)
0.716
5
UniProt:Q9UK45 LSM7
2
LSM7 [nucleoplasm]
(R-HSA-6806802)
LSM7 [cytosol]
(R-HSA-2028610)
0.666
6
UniProt:P14678 SNRPB
4
Me2-R108,R112-SNRPB [nucleoplasm]
(R-HSA-192213)
SNRPB [nucleoplasm]
(R-HSA-71896)
SNRPB [cytosol]
(R-HSA-191798)
2xMe-SNRPB [cytosol]
(R-HSA-192218)
0.656
3
UniProt:Q16637 SMN1
2
SMN1 [nucleoplasm]
(R-HSA-191892)
SMN1 [cytosol]
(R-HSA-191839)
0.643
3
UniProt:P14678-2 SNRPB
0.623
3
UniProt:Q8WXD5 GEMIN6
2
GEMIN6 [nucleoplasm]
(R-HSA-191799)
GEMIN6 [cytosol]
(R-HSA-191771)
0.59
2
UniProt:O95400 CD2BP2
1
CD2BP2 [nucleoplasm]
(R-HSA-72054)
0.564
2
UniProt:Q15428 SF3A2
1
SF3A2 [nucleoplasm]
(R-HSA-71964)
0.564
2
UniProt:Q9H1P3 OSBPL2
1
OSBPL2 [cytosol]
(R-HSA-8867527)
0.556
3
UniProt:P62310 LSM3
2
LSM3 [nucleoplasm]
(R-HSA-6806807)
LSM3 [cytosol]
(R-HSA-429894)
0.556
3
UniProt:Q8TBB1 LNX1
1
LNX1 [cytosol]
(R-HSA-8851641)
0.556
3
UniProt:Q6FHY5 Q6FHY5
0.556
3
UniProt:P32969 RPL9
1
RPL9 [cytosol]
(R-HSA-72492)
0.556
3
UniProt:Q13422-7 IKZF1
0.556
3
UniProt:Q13422 IKZF1
0.556
3
UniProt:P42858 HTT
1
HTT [nucleoplasm]
(R-HSA-9023590)
0.556
3
UniProt:P09661 SNRPA1
1
SNRPA1 [nucleoplasm]
(R-HSA-71958)
0.547
2
UniProt:O60306 AQR
1
AQR [nucleoplasm]
(R-HSA-6781960)
0.528
2
UniProt:P08621 SNRNP70
1
SNRNP70 [nucleoplasm]
(R-HSA-71913)
0.527
3
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