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LUM [lysosomal lumen]
Stable Identifier
R-HSA-2104998
Type
Protein [EntityWithAccessionedSequence]
Species
Homo sapiens
Compartment
lysosomal lumen
Synonyms
N-glycan LUM, Lumican, LUM_HUMAN
Locations in the PathwayBrowser
Expand all
Metabolism (Homo sapiens)
Metabolism of carbohydrates (Homo sapiens)
Glycosaminoglycan metabolism (Homo sapiens)
Keratan sulfate/keratin metabolism (Homo sapiens)
Keratan sulfate degradation (Homo sapiens)
Keratan sulfate is cleaved from its proteoglycan by an unknown galactosidase (Homo sapiens)
KS core proteins [lysosomal lumen] (Homo sapiens)
LUM [lysosomal lumen] (Homo sapiens)
External Reference Information
External Reference
UniProt:P51884 LUM
Gene Names
LUM, LDC, SLRR2D
Chain
signal peptide:1-18, chain:19-338
Reference Genes
BioGPS Gene:4060 LUM
COSMIC (genes):LUM LUM
CTD Gene:4060 LUM
dbSNP Gene:4060 LUM
ENSEMBL:ENSG00000139329 LUM
ENSEMBL_homo_sapiens_GENE:ENSG00000139329.5 LUM
HGNC:6724 LUM
KEGG Gene (Homo sapiens):4060 LUM
Monarch:4060 LUM
NCBI Gene:4060 LUM
OMIM:600616 LUM
UCSC:P51884 LUM
Reference Transcript
RefSeq:NM_002345.3 LUM
Other Identifiers
11715796_s_at
16768406
201744_PM_s_at
201744_s_at
229554_PM_at
229554_at
3465249
3465250
3465251
3465252
3465253
3465254
3465257
3465258
3465259
3465260
38038_at
4060
52570_at
7965403
A_23_P99063
A_24_P270279
GE79985
GE88676
GO:0005198
GO:0005201
GO:0005515
GO:0005518
GO:0005576
GO:0005583
GO:0005615
GO:0005764
GO:0005773
GO:0005794
GO:0005796
GO:0006351
GO:0006355
GO:0007601
GO:0030021
GO:0030198
GO:0030199
GO:0030312
GO:0031012
GO:0032914
GO:0043202
GO:0043226
GO:0045944
GO:0050877
GO:0062023
GO:0070062
HMNXSV003038106
Hs.79914.1.A1_3p_at
ILMN_1790529
ILMN_2167805
PH_hs_0024678
PH_hs_0040682
TC12001803.hg
U21128_at
g4505046_3p_a_at
Participates
as a member of
KS core proteins [lysosomal lumen] (Homo sapiens)
Other forms of this molecule
LUM [extracellular region]
KS(2)-LUM [extracellular region]
KS(2)-LUM [lysosomal lumen]
KS(1)-LUM [Golgi lumen]
KS(2)-LUM [Golgi lumen]
Keratan(4)-LUM [Golgi lumen]
Keratan(3)-LUM [Golgi lumen]
Keratan(2)-LUM [Golgi lumen]
Keratan(1)-LUM [Golgi lumen]
Gal-glycan LUM [Golgi lumen]
N-glycan LUM [Golgi lumen]
Inferred To
Dmel\CG32055 [lysosomal lumen]
(Drosophila melanogaster)
lum [lysosomal lumen]
(Xenopus tropicalis)
Lum [lysosomal lumen]
(Danio rerio)
Lum [lysosomal lumen]
(Mus musculus)
Lum [lysosomal lumen]
(Rattus norvegicus)
LUM [lysosomal lumen]
(Bos taurus)
LUM [lysosomal lumen]
(Canis familiaris)
LUM [lysosomal lumen]
(Gallus gallus)
LUM [lysosomal lumen]
(Sus scrofa)
Modified Residues
Name
N4-(N-acetylamino)glucosyl-L-asparagine (ChEBI:63488) at unknown position
Modification
beta-D-GlcNAc-(1->2)-alpha-D-Man-(1->3)-[beta-D-GlcNAc-(1->2)-alpha-D-Man-(1->6)]-beta-D-Man-(1->4)-beta-D-GlcNAcl-(1->4)-beta-D-GlcNAc-yl group
PsiMod Name
N4-(N-acetylamino)glucosyl-L-asparagine
PsiMod Definition
A protein modification that effectively converts an L-asparagine residue to N4-(N-acetylaminoglucosyl)-L-asparagine.
Cross References
RefSeq
NP_002336.1
OpenTargets
ENSG00000139329
GeneCards
P51884
HPA
ENSG00000139329-LUM
Ensembl
ENSG00000139329
,
ENST00000266718
,
ENSP00000266718
PRO
P51884
Pharos - Targets
P51884
Orphanet
28194
Interactors (6)
Accession
#Entities
Entities
Confidence Score
Evidence (IntAct)
UniProt:P50281 MMP14
3
MMP14 [plasma membrane]
(R-HSA-1442472)
MMP14(21-582) [Golgi lumen]
(R-HSA-1604689)
MMP14 [Golgi lumen]
(R-HSA-1604724)
0.558
2
UniProt:P61981 YWHAG
1
YWHAG [cytosol]
(R-HSA-380312)
0.556
3
UniProt:Q92993 KAT5
1
KAT5 [nucleoplasm]
(R-HSA-3321979)
0.556
3
UniProt:Q15047-2 SETDB1
0.556
3
UniProt:Q8TAP4-4 LMO3
0.556
3
UniProt:P17252 PRKCA
8
PRKCA [cytosol]
(R-HSA-58196)
pT497,T638,S657-PRKCA [plasma membrane]
(R-HSA-4332340)
p-T497,T638,S657-PRKCA [cytosol]
(R-HSA-4332337)
PRKCA [plasma membrane]
(R-HSA-156469)
p-T497-PRKCA [cytosol]
(R-HSA-5218731)
p-T497,T638,S657-PRKCA [nucleoplasm]
(R-HSA-5223292)
PRKCA [photoreceptor disc membrane]
(R-HSA-2648987)
PRKCA [nucleoplasm]
(R-HSA-450530)
0.556
3
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