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AcK6-HIST1H2BD [nucleoplasm]
Stable Identifier
R-HSA-4568642
Type
Protein [EntityWithAccessionedSequence]
Species
Homo sapiens
Compartment
nucleoplasm
Synonyms
Histone H2B.b
Locations in the PathwayBrowser
Expand all
Chromatin organization (Homo sapiens)
Chromatin modifying enzymes (Homo sapiens)
HATs acetylate histones (Homo sapiens)
EP300 acetylates histone H2A, H2B, H3, H4 (Homo sapiens)
AcK-histone H2A, H2B, H3, H4 [nucleoplasm] (Homo sapiens)
AcK(6,13,16,21)- histone H2B [nucleoplasm] (Homo sapiens)
AcK(6,13,16,21)-histone HIST1H2B [nucleoplasm] (Homo sapiens)
AcK(6,13,16,21)-HIST1H2BD [nucleoplasm] (Homo sapiens)
AcK6-HIST1H2BD [nucleoplasm] (Homo sapiens)
HDACs deacetylate histones (Homo sapiens)
HDAC10 deacetylates histone (Homo sapiens)
Acetylated core histone octamer [nucleoplasm] (Homo sapiens)
Acetylated histone H2A:H2B [nucleoplasm] (Homo sapiens)
AcK(6,13,16,21)- histone H2B [nucleoplasm] (Homo sapiens)
AcK(6,13,16,21)-histone HIST1H2B [nucleoplasm] (Homo sapiens)
AcK(6,13,16,21)-HIST1H2BD [nucleoplasm] (Homo sapiens)
AcK6-HIST1H2BD [nucleoplasm] (Homo sapiens)
HDAC1:2-containing complex deacetylate histones (Homo sapiens)
Acetylated core histone octamer [nucleoplasm] (Homo sapiens)
Acetylated histone H2A:H2B [nucleoplasm] (Homo sapiens)
AcK(6,13,16,21)- histone H2B [nucleoplasm] (Homo sapiens)
AcK(6,13,16,21)-histone HIST1H2B [nucleoplasm] (Homo sapiens)
AcK(6,13,16,21)-HIST1H2BD [nucleoplasm] (Homo sapiens)
AcK6-HIST1H2BD [nucleoplasm] (Homo sapiens)
HDAC3 containing complexes deacetylate histone (Homo sapiens)
Acetylated core histone octamer [nucleoplasm] (Homo sapiens)
Acetylated histone H2A:H2B [nucleoplasm] (Homo sapiens)
AcK(6,13,16,21)- histone H2B [nucleoplasm] (Homo sapiens)
AcK(6,13,16,21)-histone HIST1H2B [nucleoplasm] (Homo sapiens)
AcK(6,13,16,21)-HIST1H2BD [nucleoplasm] (Homo sapiens)
AcK6-HIST1H2BD [nucleoplasm] (Homo sapiens)
HDAC8 deacetylates histones (Homo sapiens)
Acetylated core histone octamer [nucleoplasm] (Homo sapiens)
Acetylated histone H2A:H2B [nucleoplasm] (Homo sapiens)
AcK(6,13,16,21)- histone H2B [nucleoplasm] (Homo sapiens)
AcK(6,13,16,21)-histone HIST1H2B [nucleoplasm] (Homo sapiens)
AcK(6,13,16,21)-HIST1H2BD [nucleoplasm] (Homo sapiens)
AcK6-HIST1H2BD [nucleoplasm] (Homo sapiens)
Disease (Homo sapiens)
Infectious disease (Homo sapiens)
Viral Infection Pathways (Homo sapiens)
HCMV Infection (Homo sapiens)
HCMV Early Events (Homo sapiens)
Activation of Latent HCMV Genome (Homo sapiens)
Transcriptionally Active HCMV Genome [nucleoplasm] (Homo sapiens)
Acetylated core histone octamer [nucleoplasm] (Homo sapiens)
Acetylated histone H2A:H2B [nucleoplasm] (Homo sapiens)
AcK(6,13,16,21)- histone H2B [nucleoplasm] (Homo sapiens)
AcK(6,13,16,21)-histone HIST1H2B [nucleoplasm] (Homo sapiens)
AcK(6,13,16,21)-HIST1H2BD [nucleoplasm] (Homo sapiens)
AcK6-HIST1H2BD [nucleoplasm] (Homo sapiens)
Delayed Early (DE) Gene Expression (Homo sapiens)
Transcriptionally Active HCMV Genome [nucleoplasm] (Homo sapiens)
Acetylated core histone octamer [nucleoplasm] (Homo sapiens)
Acetylated histone H2A:H2B [nucleoplasm] (Homo sapiens)
AcK(6,13,16,21)- histone H2B [nucleoplasm] (Homo sapiens)
AcK(6,13,16,21)-histone HIST1H2B [nucleoplasm] (Homo sapiens)
AcK(6,13,16,21)-HIST1H2BD [nucleoplasm] (Homo sapiens)
AcK6-HIST1H2BD [nucleoplasm] (Homo sapiens)
Immediate Early (IE) Gene Expression (Homo sapiens)
Transcriptionally Active HCMV Genome [nucleoplasm] (Homo sapiens)
Acetylated core histone octamer [nucleoplasm] (Homo sapiens)
Acetylated histone H2A:H2B [nucleoplasm] (Homo sapiens)
AcK(6,13,16,21)- histone H2B [nucleoplasm] (Homo sapiens)
AcK(6,13,16,21)-histone HIST1H2B [nucleoplasm] (Homo sapiens)
AcK(6,13,16,21)-HIST1H2BD [nucleoplasm] (Homo sapiens)
AcK6-HIST1H2BD [nucleoplasm] (Homo sapiens)
Transcriptional Activation of the HCMV Genome (Homo sapiens)
Acetylated core histone octamer [nucleoplasm] (Homo sapiens)
Acetylated histone H2A:H2B [nucleoplasm] (Homo sapiens)
AcK(6,13,16,21)- histone H2B [nucleoplasm] (Homo sapiens)
AcK(6,13,16,21)-histone HIST1H2B [nucleoplasm] (Homo sapiens)
AcK(6,13,16,21)-HIST1H2BD [nucleoplasm] (Homo sapiens)
AcK6-HIST1H2BD [nucleoplasm] (Homo sapiens)
Transcriptionally Active HCMV Genome [nucleoplasm] (Homo sapiens)
Acetylated core histone octamer [nucleoplasm] (Homo sapiens)
Acetylated histone H2A:H2B [nucleoplasm] (Homo sapiens)
AcK(6,13,16,21)- histone H2B [nucleoplasm] (Homo sapiens)
AcK(6,13,16,21)-histone HIST1H2B [nucleoplasm] (Homo sapiens)
AcK(6,13,16,21)-HIST1H2BD [nucleoplasm] (Homo sapiens)
AcK6-HIST1H2BD [nucleoplasm] (Homo sapiens)
HCMV Late Events (Homo sapiens)
Late (L) Gene Expression (Homo sapiens)
Transcriptionally Active HCMV Genome [nucleoplasm] (Homo sapiens)
Acetylated core histone octamer [nucleoplasm] (Homo sapiens)
Acetylated histone H2A:H2B [nucleoplasm] (Homo sapiens)
AcK(6,13,16,21)- histone H2B [nucleoplasm] (Homo sapiens)
AcK(6,13,16,21)-histone HIST1H2B [nucleoplasm] (Homo sapiens)
AcK(6,13,16,21)-HIST1H2BD [nucleoplasm] (Homo sapiens)
AcK6-HIST1H2BD [nucleoplasm] (Homo sapiens)
External Reference Information
External Reference
UniProt:P58876 H2BC5
Gene Names
H2BC5, H2BFB, HIRIP2, HIST1H2BD
Chain
initiator methionine:, chain:2-126
Reference Genes
BioGPS Gene:3017 H2BC5
COSMIC (genes):HIST1H2BD H2BC5
CTD Gene:3017 H2BC5
dbSNP Gene:3017 H2BC5
ENSEMBL:ENSG00000158373 HIST1H2BD
HGNC:4747 H2BC5
KEGG:hsa:3017 H2BC5
Monarch:3017 H2BC5
NCBI Gene:3017 H2BC5
OMIM:602799 H2BC5
UCSC:P58876 H2BC5
Reference Transcript
RefSeq:NM_138720.2 H2BC5
RefSeq:NM_021063.3 H2BC5
RefSeq:XM_005249039.3 H2BC5
Other Identifiers
11724021_at
11728152_a_at
11728153_x_at
17005573
209911_PM_x_at
209911_x_at
222067_PM_x_at
222067_x_at
2899178
2899179
2899193
2947034
3017
38576_at
8117382
88155_at
ADDON002904.hg
ADDON002918.hg
A_24_P146211
GE63182
GO:0000786
GO:0003674
GO:0003677
GO:0005198
GO:0005515
GO:0005634
GO:0005654
GO:0005694
GO:0005829
GO:0030527
GO:0043226
GO:0043229
GO:0046982
GO:0070062
HMNXSV003000583
HMNXSV003001089
Hs.180779.1.S1_3p_at
ILMN_1651496
ILMN_1758623
ILMN_1777405
PH_hs_0010698
TC06000169.hg
g12803984_3p_at
g12803984_3p_x_at
Participates
as a member of
AcK(6,13,16,21)-HIST1H2BD [nucleoplasm] (Homo sapiens)
Other forms of this molecule
Ub-HIST1H2BD [nucleoplasm]
AcK-HIST1H2BD [nucleoplasm]
HIST1H2BD [extracellular region]
AcK16-HIST1H2BD [nucleoplasm]
AcK21-HIST1H2BD [nucleoplasm]
AcK13-HIST1H2BD [nucleoplasm]
Ub-121-HIST1H2BD [nucleoplasm]
HIST1H2BD [nucleoplasm]
Inferred To
H2Bv2 [nucleoplasm]
(Dictyostelium discoideum)
htb1 [nucleoplasm]
(Schizosaccharomyces pombe)
H2bc9 [nucleoplasm]
(Mus musculus)
AcK6-HIST1H2BC [nucleoplasm]
(Danio rerio)
HIST1H2B5L [nucleoplasm]
(Gallus gallus)
H2B-V [nucleoplasm]
(Gallus gallus)
H2Bv3 [nucleoplasm]
(Dictyostelium discoideum)
H2B-VII [nucleoplasm]
(Gallus gallus)
Homologues of AcK6-HIST1H2BC [nucleoplasm]
(Danio rerio)
Homologues of AcK6-HIST1H2BC [nucleoplasm]
(Gallus gallus)
Homologues of AcK6-HIST1H2BC [nucleoplasm]
(Xenopus tropicalis)
H2B-I [nucleoplasm]
(Gallus gallus)
HTB2 [nucleoplasm]
(Saccharomyces cerevisiae)
H2Bv1 [nucleoplasm]
(Dictyostelium discoideum)
H2B-VIII [nucleoplasm]
(Gallus gallus)
His2B [nucleoplasm]
(Drosophila melanogaster)
AcK6-HIST1H2BB [nucleoplasm]
(Plasmodium falciparum)
AcK6-HIST1H2BD [nucleoplasm]
(Bos taurus)
AcK6-HIST1H2BD [nucleoplasm]
(Canis familiaris)
AcK6-HIST1H2BD [nucleoplasm]
(Sus scrofa)
h2bc11 [nucleoplasm]
(Xenopus tropicalis)
Homologues of AcK6-HIST1H2BB [nucleoplasm]
(Dictyostelium discoideum)
Homologues of AcK6-HIST1H2BB [nucleoplasm]
(Plasmodium falciparum)
Homologues of AcK6-HIST1H2BB [nucleoplasm]
(Saccharomyces cerevisiae)
si:ch211-113a14.22 [nucleoplasm]
(Danio rerio)
LOC100498553 [nucleoplasm]
(Xenopus tropicalis)
LOC116411635 [nucleoplasm]
(Xenopus tropicalis)
hist2h2l [nucleoplasm]
(Danio rerio)
HTB1 [nucleoplasm]
(Saccharomyces cerevisiae)
LOC570661 [nucleoplasm]
(Danio rerio)
h2bc21 [nucleoplasm]
(Xenopus tropicalis)
Modified Residues
Name
N6-acetyl-L-lysine at 6
Coordinate
6
PsiMod Name
N6-acetyl-L-lysine [MOD:00064]
PsiMod Definition
A protein modification that effectively converts an L-lysine residue to N6-acetyl-L-lysine.
Cross References
RefSeq
NP_619790.1
,
NP_066407.1
,
XP_005249096.1
ENSEMBL
ENST00000377777
,
ENSP00000289316
,
ENSP00000367008
,
ENST00000289316
OpenTargets
ENSG00000158373
HPA
ENSG00000158373-H2BC5
PRO
P58876
Pharos - Targets
P58876
GlyGen
P58876
Interactors (2)
Accession
#Entities
Entities
Confidence Score
Evidence (IntAct)
UniProt:P16104 H2AFX
7
H2AFX [nucleoplasm]
(R-HSA-56151)
p-Y143-H2AFX [nucleoplasm]
(R-HSA-5683942)
p-S140,Y143-H2AFX [nucleoplasm]
(R-HSA-5683953)
p-S140-H2AFX [nucleoplasm]
(R-HSA-75170)
K63PolyUb-K14,K16,p-S140-H2AFX [nucleoplasm]
(R-HSA-5682847)
H2AFX [extracellular region]
(R-HSA-977583)
Me2sR4-H2AFX [nucleoplasm]
(R-HSA-5218317)
0.669
3
UniProt:Q01831 XPC
5
monoSUMO1-K655-XPC [nucleoplasm]
(R-HSA-4570458)
Ub,SUMO,K63polyUb-XPC [nucleoplasm]
(R-HSA-6790522)
Ub,SUMO-XPC [nucleoplasm]
(R-HSA-6790460)
Ub-XPC [nucleoplasm]
(R-HSA-6782944)
XPC [nucleoplasm]
(R-HSA-67441)
0.527
3
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