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LRPPRC [mitochondrial matrix]
Stable Identifier
R-HSA-5336174
Type
Protein [EntityWithAccessionedSequence]
Species
Homo sapiens
Compartment
mitochondrial matrix
Synonyms
Leucine-rich PPR motif-containing protein, mitochondrial, LPPRC_HUMAN
Locations in the PathwayBrowser
Expand all
Metabolism of RNA (Homo sapiens)
Mitochondrial RNA degradation (Homo sapiens)
SLIRP:LRPPRC binds mitochondrial RNAs (Homo sapiens)
SLIRP:LRPPRC [mitochondrial matrix] (Homo sapiens)
LRPPRC [mitochondrial matrix] (Homo sapiens)
SLIRP:LRPPRC:12S rRNA,16S rRNA,MT-ATP6,8,MT-CO1,2,3,MT-ND1,2,34,4L,5,6 mRNA [mitochondrial matrix] (Homo sapiens)
SLIRP:LRPPRC [mitochondrial matrix] (Homo sapiens)
LRPPRC [mitochondrial matrix] (Homo sapiens)
SUPV3L1:PNPT1 hydrolyzes mitochondrial RNA to yield 4-5 nucleotide oligoribonucleotides (Homo sapiens)
SLIRP:LRPPRC [mitochondrial matrix] (Homo sapiens)
LRPPRC [mitochondrial matrix] (Homo sapiens)
External Reference Information
External Reference
UniProt:P42704 LRPPRC
Gene Names
LRPPRC, LRP130
Chain
transit peptide:1-59, chain:60-1394
Reference Genes
BioGPS Gene:10128 LRPPRC
COSMIC (genes):LRPPRC LRPPRC
CTD Gene:10128 LRPPRC
dbSNP Gene:10128 LRPPRC
ENSEMBL:ENSG00000138095 LRPPRC
ENSEMBL_homo_sapiens_GENE:ENSG00000138095.20 LRPPRC
HGNC:15714 LRPPRC
KEGG Gene (Homo sapiens):10128 LRPPRC
Monarch:10128 LRPPRC
NCBI Gene:10128 LRPPRC
OMIM:607544 LRPPRC
UCSC:P42704 LRPPRC
Reference Transcript
RefSeq:NM_133259.3 LRPPRC
Other Identifiers
10128
11717296_s_at
11717297_at
11717298_s_at
11745328_a_at
16897056
211615_PM_s_at
211615_s_at
211971_PM_s_at
211971_s_at
230194_PM_at
230194_at
2550796
2550797
2550798
2550799
2550800
2550801
2550802
2550803
2550806
2550810
2550812
2550814
2550815
2550816
2550818
2550821
2550825
2550826
2550830
2550832
2550837
2550838
2550840
2550841
2550842
2550843
2550844
2550845
2550846
2550847
2550848
2550849
2550853
2550858
2550860
2550861
2550867
2550869
2550871
2550873
2550875
2550876
2550877
2550878
2550879
2550880
2550885
2550886
41754_at
58758_s_at
8051882
A_24_P26073
A_24_P674924
A_33_P3388855
GE62712
GO:0000228
GO:0000794
GO:0000957
GO:0000961
GO:0003677
GO:0003697
GO:0003723
GO:0003730
GO:0005515
GO:0005634
GO:0005635
GO:0005637
GO:0005640
GO:0005654
GO:0005694
GO:0005737
GO:0005739
GO:0005759
GO:0005856
GO:0005874
GO:0007018
GO:0008017
GO:0008092
GO:0016020
GO:0031625
GO:0042645
GO:0043226
GO:0047497
GO:0048471
GO:0048487
GO:0051028
GO:0070129
GO:0140053
GO:1990904
HMNXSV003001028
HMNXSV003029701
HMNXSV003034655
Hs.182490.0.S1_3p_s_at
Hs.54310.0.A1_3p_at
ILMN_1662417
M92439_at
PH_hs_0010771
TC02001795.hg
g177109_3p_s_at
Participates
as a component of
SLIRP:LRPPRC [mitochondrial matrix] (Homo sapiens)
Cross References
RefSeq
NP_573566.2
OpenTargets
ENSG00000138095
HPA
ENSG00000138095-LRPPRC
GeneCards
P42704
Ensembl
ENSG00000138095
,
ENSP00000260665
,
ENST00000260665
PRO
P42704
Pharos - Targets
P42704
Orphanet
16373
PDB
8ANY
Interactors (10)
Accession
#Entities
Entities
Confidence Score
Evidence (IntAct)
UniProt:P01106 MYC
2
PolyUb-MYC [nucleoplasm]
(R-HSA-6783169)
MYC [nucleoplasm]
(R-HSA-188379)
0.669
3
UniProt:P05067 APP
20
APP(18-770) [trans-Golgi network membrane]
(R-HSA-5229136)
APP-C99 [cytosol]
(R-HSA-9617603)
APP(18-770) [extracellular region]
(R-HSA-49335)
APP(18-770) [platelet alpha granule lumen]
(R-HSA-139835)
APP(18-687) [extracellular region]
(R-HSA-9010033)
APP(688-770) [plasma membrane]
(R-HSA-9010028)
APP(18-770) [Golgi lumen]
(R-HSA-8871509)
APP(18-770) [plasma membrane]
(R-HSA-9010038)
APP(18-671) [endosome lumen]
(R-HSA-5693003)
APP(714-770) [endosome lumen]
(R-HSA-6783325)
APP(712-770) [endosome lumen]
(R-HSA-6783331)
APP(672-770) [endosome lumen]
(R-HSA-9010082)
APP(672-713) [endosome lumen]
(R-HSA-5692993)
APP(672-711) [endosome lumen]
(R-HSA-6783333)
APP(18-770) [endosome lumen]
(R-HSA-5229077)
p-APP [endoplasmic reticulum lumen]
(R-HSA-8957012)
APP [endoplasmic reticulum lumen]
(R-HSA-8956696)
APP(672-711) [extracellular region]
(R-HSA-976740)
APP(672-711) [cytosol]
(R-HSA-877188)
APP(672-713) [extracellular region]
(R-HSA-879340)
0.584
8
UniProt:P06730 EIF4E
1
EIF4E [cytosol]
(R-HSA-72578)
0.576
6
UniProt:P63104 YWHAZ
2
YWHAZ [nucleoplasm]
(R-HSA-450469)
YWHAZ [cytosol]
(R-HSA-206099)
0.564
2
UniProt:P04626 ERBB2
20
ERBB2 G309E [plasma membrane]
(R-HSA-9665342)
ERBB2 G309A [plasma membrane]
(R-HSA-9665349)
ERBB2 S310F [plasma membrane]
(R-HSA-9665350)
ERBB2 S310Y [plasma membrane]
(R-HSA-9665344)
p-6Y-ERBB2 G309A [plasma membrane]
(R-HSA-9665381)
p-6Y-ERBB2 G309E [plasma membrane]
(R-HSA-9665382)
p-6Y-ERBB2 S310F [plasma membrane]
(R-HSA-9665379)
p-6Y-ERBB2 S310Y [plasma membrane]
(R-HSA-9665385)
p-Y-ERBB2 L755P [plasma membrane]
(R-HSA-9654268)
p-Y-ERBB2 I767M [plasma membrane]
(R-HSA-9654303)
p-Y-ERBB2 T798I [plasma membrane]
(R-HSA-9654618)
p-Y-ERBB2 Y772_A775dup [plasma membrane]
(R-HSA-9665652)
p-Y-ERBB2 T862A [plasma membrane]
(R-HSA-9654695)
p-Y-ERBB2 T798M [plasma membrane]
(R-HSA-9654615)
p-Y-ERBB2 H878Y [plasma membrane]
(R-HSA-9654833)
p-Y-ERBB2 V777L [plasma membrane]
(R-HSA-9654401)
p-Y-ERBB2 L755S [plasma membrane]
(R-HSA-9654194)
p-Y-ERBB2 V777E [plasma membrane]
(R-HSA-9654397)
p-Y-ERBB2 V777M [plasma membrane]
(R-HSA-9654398)
p-Y-ERBB2 L755M [plasma membrane]
(R-HSA-9654191)
0.527
2
UniProt:Q9NZI8 IGF2BP1
1
IGF2BP1 [cytosol]
(R-HSA-428366)
0.527
2
UniProt:Q9UBK2 PPARGC1A
4
monoSUMO1-K184-PPARGC1A [nucleoplasm]
(R-HSA-3903023)
p-T263,S266,T299-PPARGC1A [nucleoplasm]
(R-HSA-1592224)
p-T178,S539-PPARGC1A [nucleoplasm]
(R-HSA-1592204)
PPARGC1A [nucleoplasm]
(R-HSA-442481)
0.524
2
UniProt:P63000 RAC1
6
RAC1 [ficolin-1-rich granule membrane]
(R-HSA-6804802)
RAC1 [secretory granule membrane]
(R-HSA-6804770)
GGC-PalmC-RAC1 [plasma membrane]
(R-HSA-2316446)
RAC1 [endoplasmic reticulum membrane]
(R-HSA-5672076)
RAC1 [cytosol]
(R-HSA-442615)
RAC1 [plasma membrane]
(R-HSA-351141)
0.508
2
UniProt:P13569 CFTR
17
PolyUb-CFTR [clathrin-coated endocytic vesicle membrane]
(R-HSA-8869104)
PolyUb-CFTR [plasma membrane]
(R-HSA-8867595)
CFTR [lysosomal membrane]
(R-HSA-5627279)
CFTR [Golgi-associated vesicle membrane]
(R-HSA-5627079)
CFTR [endosome membrane]
(R-HSA-6782965)
PolyUb-CFTR [endosome membrane]
(R-HSA-6782976)
CFTR F508del [endoplasmic reticulum membrane]
(R-HSA-8866834)
ub-CFTR F508del [cytosol]
(R-HSA-8866838)
ub-CFTR F508del [endoplasmic reticulum membrane]
(R-HSA-8866842)
CFTR G542* [plasma membrane]
(R-HSA-5678986)
CFTR G551D [plasma membrane]
(R-HSA-5678977)
CFTR W1282* [plasma membrane]
(R-HSA-5678976)
CFTR F508del [plasma membrane]
(R-HSA-5678978)
CFTR N1303K [plasma membrane]
(R-HSA-5678983)
CFTR [plasma membrane]
(R-HSA-383188)
CFTR [endoplasmic reticulum membrane]
(R-HSA-8866837)
misfolded CFTR [endoplasmic reticulum membrane]
(R-HSA-8868730)
0.483
9
UniProt:P05919 vpu
6
VPU (P05919) protein [cytosol]
(R-HIV-173223)
VPU (P05919) [endoplasmic reticulum membrane]
(R-HIV-180550)
VPU (P05919) protein [extracellular region]
(R-HIV-175522)
VPU (P05919) protein [nucleoplasm]
(R-HIV-175200)
VPU (P05919) [Golgi membrane]
(R-HIV-3149439)
VPU (P05919) [plasma membrane]
(R-HIV-3149423)
0.462
4
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