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LSM4 [nucleoplasm]
Stable Identifier
R-HSA-6806804
Type
Protein [EntityWithAccessionedSequence]
Species
Homo sapiens
Compartment
nucleoplasm
Synonyms
U6 snRNA-associated Sm-like protein LSm4, LSM4_HUMAN
Locations in the PathwayBrowser
Expand all
Metabolism of RNA (Homo sapiens)
Processing of Capped Intron-Containing Pre-mRNA (Homo sapiens)
mRNA Splicing (Homo sapiens)
mRNA Splicing - Major Pathway (Homo sapiens)
Formation of the Spliceosomal B complex (Homo sapiens)
Spliceosomal Pre-B complex [nucleoplasm] (Homo sapiens)
U4:U5:U6 tri-snRNP complex [nucleoplasm] (Homo sapiens)
U4 snRNP:U6 snRNP complex [nucleoplasm] (Homo sapiens)
U6 snRNP [nucleoplasm] (Homo sapiens)
LSM2-8 complex [nucleoplasm] (Homo sapiens)
LSM4 [nucleoplasm] (Homo sapiens)
Formation of the Spliceosomal Bact complex (Homo sapiens)
LSM2-8 complex [nucleoplasm] (Homo sapiens)
LSM4 [nucleoplasm] (Homo sapiens)
Formation of the Spliceosomal Pre-B complex (Homo sapiens)
Spliceosomal Pre-B complex [nucleoplasm] (Homo sapiens)
U4:U5:U6 tri-snRNP complex [nucleoplasm] (Homo sapiens)
U4 snRNP:U6 snRNP complex [nucleoplasm] (Homo sapiens)
U6 snRNP [nucleoplasm] (Homo sapiens)
LSM2-8 complex [nucleoplasm] (Homo sapiens)
LSM4 [nucleoplasm] (Homo sapiens)
U4:U5:U6 tri-snRNP complex [nucleoplasm] (Homo sapiens)
U4 snRNP:U6 snRNP complex [nucleoplasm] (Homo sapiens)
U6 snRNP [nucleoplasm] (Homo sapiens)
LSM2-8 complex [nucleoplasm] (Homo sapiens)
LSM4 [nucleoplasm] (Homo sapiens)
External Reference Information
External Reference
UniProt:Q9Y4Z0 LSM4
Gene Names
LSM4
Chain
chain:1-139
Reference Genes
BioGPS Gene:25804 LSM4
COSMIC (genes):LSM4 LSM4
CTD Gene:25804 LSM4
dbSNP Gene:25804 LSM4
ENSEMBL:ENSG00000130520 LSM4
ENSEMBL_homo_sapiens_GENE:ENSG00000130520.11 LSM4
HGNC:17259 LSM4
KEGG Gene (Homo sapiens):25804 LSM4
Monarch:25804 LSM4
NCBI Gene:25804 LSM4
OMIM:607284 LSM4
UCSC:Q9Y4Z0 LSM4
Reference Transcript
RefSeq:NM_012321.4 LSM4
Other Identifiers
11717244_at
11717245_at
11717246_x_at
16870387
202736_PM_s_at
202736_s_at
202737_PM_s_at
202737_s_at
25804
32559_s_at
3854900
3854901
3854902
3854903
3854904
3854905
3854907
3854908
3854913
3854914
3854918
8035449
A_24_P224776
GE58482
GO:0000387
GO:0000398
GO:0000932
GO:0000956
GO:0003723
GO:0005515
GO:0005634
GO:0005654
GO:0005681
GO:0005688
GO:0005829
GO:0006396
GO:0006397
GO:0008380
GO:0016020
GO:0016071
GO:0017070
GO:0032991
GO:0033962
GO:0042731
GO:0043226
GO:0043229
GO:0046540
GO:0065003
GO:0071005
GO:0097526
GO:0120115
GO:1990904
HMNXSV003005866
Hs.76719.0.S1_3p_a_at
ILMN_1788099
PH_hs_0004426
PH_hs_0035461
TC19001286.hg
g6912485_3p_a_at
Participates
as a component of
LSM2-8 complex [nucleoplasm] (Homo sapiens)
Other forms of this molecule
LSM4 [cytosol]
Inferred To
Lsm4 [nucleoplasm]
(Mus musculus)
Lsm4 [nucleoplasm]
(Rattus norvegicus)
LSM4 [nucleoplasm]
(Bos taurus)
LSM4 [nucleoplasm]
(Canis familiaris)
LSM4 [nucleoplasm]
(Gallus gallus)
LSM4 [nucleoplasm]
(Plasmodium falciparum)
LSM4 [nucleoplasm]
(Sus scrofa)
lsm-4 [nucleoplasm]
(Caenorhabditis elegans)
lsm4 [nucleoplasm]
(Dictyostelium discoideum)
lsm4 [nucleoplasm]
(Schizosaccharomyces pombe)
lsm4 [nucleoplasm]
(Xenopus tropicalis)
CG5356 [nucleoplasm]
(Drosophila melanogaster)
Cross References
RefSeq
NP_036453.1
OpenTargets
ENSG00000130520
HPA
ENSG00000130520-LSM4
GeneCards
Q9Y4Z0
Ensembl
ENSG00000130520
,
ENSP00000469468
,
ENST00000593829
PRO
Q9Y4Z0
Pharos - Targets
Q9Y4Z0
PDB
5O9Z
,
6AHD
,
7ABG
,
3JCR
,
6QX9
,
6AH0
,
6QW6
,
8QO9
Interactors (2)
Accession
#Entities
Entities
Confidence Score
Evidence (IntAct)
UniProt:P62304 SNRPE
2
SNRPE [nucleoplasm]
(R-HSA-71905)
SNRPE [cytosol]
(R-HSA-191782)
0.547
2
UniProt:P62316 SNRPD2
2
SNRPD2 [nucleoplasm]
(R-HSA-71901)
SNRPD2 [cytosol]
(R-HSA-191810)
0.527
2
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