Toggle navigation
About
What is Reactome ?
News
Team
Scientific Advisory Board
Editorial Calendar
Release Calendar
Statistics
Our Logo
License Agreement
Privacy Notice
Disclaimer
Content
Table of Contents
DOIs
Data Schema
Reactome Research Spotlight
ORCID Integration Project
COVID-19 Disease Pathways
Docs
Userguide
Pathway Browser
How do I search ?
Details Panel
Analysis Tools
Analysis Data
Analysis Gene Expression
Species Comparison
Tissue Distribution
Diseases
Review Status of Reactome Events
ReactomeFIViz
Developer's Zone
Graph Database
Analysis Service
Content Service
Pathways Overview
Pathway Diagrams
Icon Info
EHLD Specs & Guidelines
Icon Library Guidelines
Data Model
Computationally inferred events
FAQ
Linking to Us
Citing us
Tools
Pathway Browser
Analyse gene list
Analyse gene expression
Species Comparison
Tissue Distribution
Analysis Service
Content Service
ReactomeFIViz
Overlays
DisGeNET
Web
API
Advanced Data Search
Site Search
Community
Icon Library
Outreach
Events
Training
Publications
Partners
Papers Citing Us
Resources Guide
Collaboration
Download
About
What is Reactome ?
News
Team
Scientific Advisory Board
Editorial Calendar
Release Calendar
Statistics
Our Logo
License Agreement
Privacy Notice
Disclaimer
Content
Table of Contents
DOIs
Data Schema
Reactome Research Spotlight
ORCID Integration Project
COVID-19 Disease Pathways
Docs
Userguide
Pathway Browser
How do I search ?
Details Panel
Analysis Tools
Analysis Data
Analysis Gene Expression
Species Comparison
Tissue Distribution
Diseases
Review Status of Reactome Events
ReactomeFIViz
Developer's Zone
Graph Database
Analysis Service
Content Service
Pathways Overview
Pathway Diagrams
Icon Info
EHLD Specs & Guidelines
Icon Library Guidelines
Data Model
Computationally inferred events
FAQ
Linking to Us
Citing us
Tools
Pathway Browser
Analyse gene list
Analyse gene expression
Species Comparison
Tissue Distribution
Analysis Service
Content Service
ReactomeFIViz
Overlays
DisGeNET
Web
API
Advanced Data Search
Site Search
Community
Icon Library
Outreach
Events
Training
Publications
Partners
Papers Citing Us
Resources Guide
Collaboration
Download
Search ...
Go!
RPRD1B [nucleoplasm]
Stable Identifier
R-HSA-6814894
Type
Protein [EntityWithAccessionedSequence]
Species
Homo sapiens
Compartment
nucleoplasm
Synonyms
Regulation of nuclear pre-mRNA domain-containing protein 1B, RPR1B_HUMAN
Locations in the PathwayBrowser
Expand all
Gene expression (Transcription) (Homo sapiens)
RNA Polymerase II Transcription (Homo sapiens)
RNA polymerase II transcribes snRNA genes (Homo sapiens)
CBCAP complex binds 7-methylguanosine cap of snRNA (Homo sapiens)
RNA polymerase II (phosphoserine-2,7):RPAP2:Integrator:LEC:CBCAP:capped pre-snRNA:Initiation factors:snRNA gene [nucleoplasm] (Homo sapiens)
RNA polymerase II (phospho-Ser2,7 CTD):RPRD1A,B:RPRD2:RPAP2:Integrator:LEC [nucleoplasm] (Homo sapiens)
RPRD1A,B:RPRD1A,B [nucleoplasm] (Homo sapiens)
RPRD1A,B [nucleoplasm] (Homo sapiens)
RPRD1B [nucleoplasm] (Homo sapiens)
RNA polymerase II (phosphoserine-2,7):RPAP2:Integrator:LEC:capped pre-snRNA:Initiation factors:snRNA gene [nucleoplasm] (Homo sapiens)
RNA polymerase II (phospho-Ser2,7 CTD):RPRD1A,B:RPRD2:RPAP2:Integrator:LEC [nucleoplasm] (Homo sapiens)
RPRD1A,B:RPRD1A,B [nucleoplasm] (Homo sapiens)
RPRD1A,B [nucleoplasm] (Homo sapiens)
RPRD1B [nucleoplasm] (Homo sapiens)
Dephosphorylation and dissociation of RNA polymerase II at 3' end of snRNA gene (Homo sapiens)
RNA polymerase II (phosphoserine-2,7):RPAP2:Integrator:LEC:Initiation factors:snRNA gene [nucleoplasm] (Homo sapiens)
RNA polymerase II (phospho-Ser2,7 CTD):RPRD1A,B:RPRD2:RPAP2:Integrator:LEC [nucleoplasm] (Homo sapiens)
RPRD1A,B:RPRD1A,B [nucleoplasm] (Homo sapiens)
RPRD1A,B [nucleoplasm] (Homo sapiens)
RPRD1B [nucleoplasm] (Homo sapiens)
RPRD1A,B:RPRD1A,B [nucleoplasm] (Homo sapiens)
RPRD1A,B [nucleoplasm] (Homo sapiens)
RPRD1B [nucleoplasm] (Homo sapiens)
Integrator complex processes the 3' end of snRNA (Homo sapiens)
RNA polymerase II (phosphoserine-2,7):RPAP2:Integrator:LEC:CBCAP:capped pre-snRNA:Initiation factors:snRNA gene [nucleoplasm] (Homo sapiens)
RNA polymerase II (phospho-Ser2,7 CTD):RPRD1A,B:RPRD2:RPAP2:Integrator:LEC [nucleoplasm] (Homo sapiens)
RPRD1A,B:RPRD1A,B [nucleoplasm] (Homo sapiens)
RPRD1A,B [nucleoplasm] (Homo sapiens)
RPRD1B [nucleoplasm] (Homo sapiens)
RNA polymerase II (phosphoserine-2,7):RPAP2:Integrator:LEC:Initiation factors:snRNA gene [nucleoplasm] (Homo sapiens)
RNA polymerase II (phospho-Ser2,7 CTD):RPRD1A,B:RPRD2:RPAP2:Integrator:LEC [nucleoplasm] (Homo sapiens)
RPRD1A,B:RPRD1A,B [nucleoplasm] (Homo sapiens)
RPRD1A,B [nucleoplasm] (Homo sapiens)
RPRD1B [nucleoplasm] (Homo sapiens)
Pre-snRNA is elongated and capped with 7-methylguanosine (Homo sapiens)
RNA polymerase II (phosphoserine-2,7):RPAP2:Integrator:LEC:capped pre-snRNA:Initiation factors:snRNA gene [nucleoplasm] (Homo sapiens)
RNA polymerase II (phospho-Ser2,7 CTD):RPRD1A,B:RPRD2:RPAP2:Integrator:LEC [nucleoplasm] (Homo sapiens)
RPRD1A,B:RPRD1A,B [nucleoplasm] (Homo sapiens)
RPRD1A,B [nucleoplasm] (Homo sapiens)
RPRD1B [nucleoplasm] (Homo sapiens)
RNA polymerase II (phosphoserine-5,7):RPRD1A,B:RPRD2:RPAP2:Integrator:LEC:pre-snRNA:Initiation factors:snRNA gene [nucleoplasm] (Homo sapiens)
RNA polymerase II (phospho-Ser5,7 CTD):RDRP1A,B:RDRP2:RPAP2:Integrator:LEC [nucleoplasm] (Homo sapiens)
RPRD1A,B:RPRD1A,B [nucleoplasm] (Homo sapiens)
RPRD1A,B [nucleoplasm] (Homo sapiens)
RPRD1B [nucleoplasm] (Homo sapiens)
Pre-snRNA transcript initiation, Integrator binding, LEC binding (Homo sapiens)
RNA polymerase II (phosphoserine-5,7):RPRD1A,B:RPRD2:RPAP2:Integrator:LEC:pre-snRNA:Initiation factors:snRNA gene [nucleoplasm] (Homo sapiens)
RNA polymerase II (phospho-Ser5,7 CTD):RDRP1A,B:RDRP2:RPAP2:Integrator:LEC [nucleoplasm] (Homo sapiens)
RPRD1A,B:RPRD1A,B [nucleoplasm] (Homo sapiens)
RPRD1A,B [nucleoplasm] (Homo sapiens)
RPRD1B [nucleoplasm] (Homo sapiens)
RPAP2:RPRD1A,B:RPRD2:RNA polymerase II (phosphoserine-5,7):Initiation factors:snRNA gene [nucleoplasm] (Homo sapiens)
RNA polymerase II (phospho-Ser5,7 CTD):RPRD1A,B:RPRD2:RPAP2 [nucleoplasm] (Homo sapiens)
RPRD1A,B:RPRD1A,B [nucleoplasm] (Homo sapiens)
RPRD1A,B [nucleoplasm] (Homo sapiens)
RPRD1B [nucleoplasm] (Homo sapiens)
RPAP2 binds RNA polymerase II phosphorylated at serine-7 residues of heptad repeats in the C-terminal domain (Homo sapiens)
RPAP2:RPRD1A,B:RPRD2:RNA polymerase II (phosphoserine-5,7):Initiation factors:snRNA gene [nucleoplasm] (Homo sapiens)
RNA polymerase II (phospho-Ser5,7 CTD):RPRD1A,B:RPRD2:RPAP2 [nucleoplasm] (Homo sapiens)
RPRD1A,B:RPRD1A,B [nucleoplasm] (Homo sapiens)
RPRD1A,B [nucleoplasm] (Homo sapiens)
RPRD1B [nucleoplasm] (Homo sapiens)
RPRD1A,B:RPRD1A,B [nucleoplasm] (Homo sapiens)
RPRD1A,B [nucleoplasm] (Homo sapiens)
RPRD1B [nucleoplasm] (Homo sapiens)
External Reference Information
External Reference
UniProt:Q9NQG5 RPRD1B
Gene Names
RPRD1B, C20orf77, CREPT
Chain
initiator methionine:1, chain:2-326
Reference Genes
BioGPS Gene:58490 RPRD1B
COSMIC (genes):RPRD1B RPRD1B
CTD Gene:58490 RPRD1B
dbSNP Gene:58490 RPRD1B
ENSEMBL:ENSG00000101413 RPRD1B
ENSEMBL:ENSG00000101413.12 RPRD1B
HGNC:16209 RPRD1B
KEGG Gene (Homo sapiens):58490 RPRD1B
Monarch:58490 RPRD1B
NCBI Gene:58490 RPRD1B
OMIM:614694 RPRD1B
UCSC:Q9NQG5 RPRD1B
Reference Transcript
RefSeq:NM_021215.3 RPRD1B
Other Identifiers
11718279_at
11747127_a_at
16913493
225024_PM_at
225024_at
3884452
3884453
3884454
3884455
3884456
3884457
3884459
3884460
3884464
3884465
3884468
3884469
3884483
3884484
3884485
51150_at
58490
8062433
88772_at
A_14_P123728
A_14_P139876
A_23_P91207
A_24_P250499
GE56491
GO:0000993
GO:0001111
GO:0005515
GO:0005634
GO:0005654
GO:0006351
GO:0006355
GO:0008284
GO:0010564
GO:0016071
GO:0016591
GO:0031124
GO:0042802
GO:0043226
GO:0045944
GO:0097550
HMNXSV003014181
Hs.27192.1.S2_3p_at
Hs.27192.1.S2_3p_x_at
ILMN_1765400
PH_hs_0023405
TC20000278.hg
Participates
as a member of
RPRD1A,B [nucleoplasm] (Homo sapiens)
Inferred To
RTT103 [nucleoplasm]
(Saccharomyces cerevisiae)
cids-1 [nucleoplasm]
(Caenorhabditis elegans)
Dmel\CG9018 [nucleoplasm]
(Drosophila melanogaster)
RPRD1B [nucleoplasm]
(Bos taurus)
RPRD1B [nucleoplasm]
(Canis familiaris)
RPRD1B [nucleoplasm]
(Schizosaccharomyces pombe)
RPRD1B [nucleoplasm]
(Sus scrofa)
Rprd1b [nucleoplasm]
(Mus musculus)
Rprd1b [nucleoplasm]
(Rattus norvegicus)
CREPT [nucleoplasm]
(Gallus gallus)
fb23h08 [nucleoplasm]
(Danio rerio)
Cross References
RefSeq
NP_067038.1
OpenTargets
ENSG00000101413
GeneCards
Q9NQG5
HPA
ENSG00000101413-RPRD1B
Ensembl
ENSG00000101413
,
ENST00000373433
,
ENSP00000362532
PRO
Q9NQG5
Pharos - Targets
Q9NQG5
PDB
4Q96
,
4FU3
,
4HFG
,
4FLA
,
4Q94
,
4NAD
Interactors (5)
Accession
#Entities
Entities
Confidence Score
Evidence (IntAct)
UniProt:Q8IXW5 RPAP2
1
RPAP2 [nucleoplasm]
(R-HSA-6810227)
0.688
4
UniProt:Q9H5V9 STEEP1
1
STEEP1 [nucleoplasm]
(R-HSA-9769596)
0.556
3
UniProt:P09017 HOXC4
1
HOXC4 [nucleoplasm]
(R-HSA-5617871)
0.556
3
UniProt:P19388 POLR2E
2
POLR2E [nucleoplasm]
(R-HSA-83713)
POLR2E [cytosol]
(R-HSA-1964438)
0.527
2
UniProt:P13569 CFTR
17
PolyUb-CFTR [clathrin-coated endocytic vesicle membrane]
(R-HSA-8869104)
PolyUb-CFTR [plasma membrane]
(R-HSA-8867595)
CFTR [lysosomal membrane]
(R-HSA-5627279)
CFTR [Golgi-associated vesicle membrane]
(R-HSA-5627079)
CFTR [endosome membrane]
(R-HSA-6782965)
PolyUb-CFTR [endosome membrane]
(R-HSA-6782976)
CFTR F508del [endoplasmic reticulum membrane]
(R-HSA-8866834)
ub-CFTR F508del [cytosol]
(R-HSA-8866838)
ub-CFTR F508del [endoplasmic reticulum membrane]
(R-HSA-8866842)
CFTR G542* [plasma membrane]
(R-HSA-5678986)
CFTR G551D [plasma membrane]
(R-HSA-5678977)
CFTR W1282* [plasma membrane]
(R-HSA-5678976)
CFTR F508del [plasma membrane]
(R-HSA-5678978)
CFTR N1303K [plasma membrane]
(R-HSA-5678983)
CFTR [plasma membrane]
(R-HSA-383188)
CFTR [endoplasmic reticulum membrane]
(R-HSA-8866837)
misfolded CFTR [endoplasmic reticulum membrane]
(R-HSA-8868730)
0.483
7
© 2023
Reactome
Cite Us!
Cite Us!
Cite Us!
Warning!
Unable to extract citation. Please try again later.
Download As:
BibTeX
RIS
Text