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CLP1 [nucleoplasm]
Stable Identifier
R-HSA-72017
Type
Protein [EntityWithAccessionedSequence]
Species
Homo sapiens
Compartment
nucleoplasm
Synonyms
CF II - Clp1, Clp1, Pre-mRNA cleavage complex II protein Clp1
Locations in the PathwayBrowser
Expand all
Gene expression (Transcription) (Homo sapiens)
RNA Polymerase II Transcription (Homo sapiens)
RNA Polymerase II Transcription Termination (Homo sapiens)
Cleavage of Intronless Pre-mRNA at 3'-end (Homo sapiens)
CF II [nucleoplasm] (Homo sapiens)
CLP1 [nucleoplasm] (Homo sapiens)
intronless pre-mRNA cleavage complex [nucleoplasm] (Homo sapiens)
CF II [nucleoplasm] (Homo sapiens)
CLP1 [nucleoplasm] (Homo sapiens)
Cleavage of mRNA at the 3'-end (Homo sapiens)
CF II [nucleoplasm] (Homo sapiens)
CLP1 [nucleoplasm] (Homo sapiens)
Spliced mRNA:CBC:EJC:TREX [nucleoplasm] (Homo sapiens)
Cleavage and Polyadenylation Complex [nucleoplasm] (Homo sapiens)
CF II [nucleoplasm] (Homo sapiens)
CLP1 [nucleoplasm] (Homo sapiens)
mRNA 3'-end cleavage factor [nucleoplasm] (Homo sapiens)
CF II [nucleoplasm] (Homo sapiens)
CLP1 [nucleoplasm] (Homo sapiens)
Metabolism of RNA (Homo sapiens)
Processing of Capped Intron-Containing Pre-mRNA (Homo sapiens)
Formation of the Cleavage and Polyadenylation Complex (Homo sapiens)
CF II [nucleoplasm] (Homo sapiens)
CLP1 [nucleoplasm] (Homo sapiens)
Cleavage and Polyadenylation Complex [nucleoplasm] (Homo sapiens)
CF II [nucleoplasm] (Homo sapiens)
CLP1 [nucleoplasm] (Homo sapiens)
mRNA 3'-end processing (Homo sapiens)
Cleavage of mRNA at the 3'-end (Homo sapiens)
CF II [nucleoplasm] (Homo sapiens)
CLP1 [nucleoplasm] (Homo sapiens)
Spliced mRNA:CBC:EJC:TREX [nucleoplasm] (Homo sapiens)
Cleavage and Polyadenylation Complex [nucleoplasm] (Homo sapiens)
CF II [nucleoplasm] (Homo sapiens)
CLP1 [nucleoplasm] (Homo sapiens)
mRNA 3'-end cleavage factor [nucleoplasm] (Homo sapiens)
CF II [nucleoplasm] (Homo sapiens)
CLP1 [nucleoplasm] (Homo sapiens)
TREX complex binds spliced, capped mRNA:CBC:EJC cotranscriptionally (Homo sapiens)
Spliced mRNA:CBC:EJC:TREX [nucleoplasm] (Homo sapiens)
Cleavage and Polyadenylation Complex [nucleoplasm] (Homo sapiens)
CF II [nucleoplasm] (Homo sapiens)
CLP1 [nucleoplasm] (Homo sapiens)
Spliced mRNP [nucleoplasm] (Homo sapiens)
Cleavage and Polyadenylation Complex [nucleoplasm] (Homo sapiens)
CF II [nucleoplasm] (Homo sapiens)
CLP1 [nucleoplasm] (Homo sapiens)
Processing of Capped Intronless Pre-mRNA (Homo sapiens)
Processing of Intronless Pre-mRNAs (Homo sapiens)
Binding of Cleavage factors and Poly(A)Polymerase to the CstF:CPSF:Pre-mRNA Complex (Homo sapiens)
CF II [nucleoplasm] (Homo sapiens)
CLP1 [nucleoplasm] (Homo sapiens)
intronless pre-mRNA cleavage complex [nucleoplasm] (Homo sapiens)
CF II [nucleoplasm] (Homo sapiens)
CLP1 [nucleoplasm] (Homo sapiens)
Cleavage and polyadenylation of Intronless Pre-mRNA (Homo sapiens)
CF II [nucleoplasm] (Homo sapiens)
CLP1 [nucleoplasm] (Homo sapiens)
intronless pre-mRNA cleavage complex [nucleoplasm] (Homo sapiens)
CF II [nucleoplasm] (Homo sapiens)
CLP1 [nucleoplasm] (Homo sapiens)
Cleavage of Intronless Pre-mRNA at 3'-end (Homo sapiens)
CF II [nucleoplasm] (Homo sapiens)
CLP1 [nucleoplasm] (Homo sapiens)
intronless pre-mRNA cleavage complex [nucleoplasm] (Homo sapiens)
CF II [nucleoplasm] (Homo sapiens)
CLP1 [nucleoplasm] (Homo sapiens)
tRNA processing (Homo sapiens)
tRNA processing in the nucleus (Homo sapiens)
TSEN complex cleaves the intron from pre-tRNA (Homo sapiens)
TSEN complex [nucleoplasm] (Homo sapiens)
CLP1 [nucleoplasm] (Homo sapiens)
External Reference Information
External Reference
UniProt:Q92989 CLP1
Gene Names
CLP1, HEAB
Chain
chain:1-425
Reference Genes
BioGPS Gene:10978 CLP1
COSMIC (genes):CLP1 CLP1
CTD Gene:10978 CLP1
dbSNP Gene:10978 CLP1
ENSEMBL:ENSG00000172409 CLP1
HGNC:16999 CLP1
KEGG:hsa:10978 CLP1
Monarch:10978 CLP1
NCBI Gene:10978 CLP1
OMIM:608757 CLP1
UCSC:Q92989 CLP1
Reference Transcript
RefSeq:NM_006831.2 CLP1
RefSeq:NM_001142597.1 CLP1
Other Identifiers
10978
11735630_a_at
204370_PM_at
204370_at
33149_at
3331404
3331405
3331406
3331407
3331408
3331409
3331410
3331411
3331412
3331424
7940046
A_14_P124396
A_23_P87141
A_24_P252973
GE59387
GO:0000214
GO:0003824
GO:0005515
GO:0005524
GO:0005634
GO:0005654
GO:0005829
GO:0005849
GO:0006388
GO:0006396
GO:0006397
GO:0006399
GO:0008033
GO:0016071
GO:0016301
GO:0016740
GO:0021695
GO:0031124
GO:0043226
GO:0046404
GO:0048856
GO:0051731
GO:0051734
GO:0051736
GO:0065003
GO:0070922
GO:0098795
HMNXSV003054855
ILMN_1659976
PH_hs_0004915
TC11000470.hg
U73524_at
g5803028_3p_at
Participates
as a component of
TSEN complex [nucleoplasm] (Homo sapiens)
CF II [nucleoplasm] (Homo sapiens)
Inferred To
CLP1 [nucleoplasm]
(Bos taurus)
CLP1 [nucleoplasm]
(Caenorhabditis elegans)
CLP1 [nucleoplasm]
(Canis familiaris)
CLP1 [nucleoplasm]
(Danio rerio)
CLP1 [nucleoplasm]
(Dictyostelium discoideum)
CLP1 [nucleoplasm]
(Drosophila melanogaster)
CLP1 [nucleoplasm]
(Gallus gallus)
CLP1 [nucleoplasm]
(Mus musculus)
CLP1 [nucleoplasm]
(Rattus norvegicus)
CLP1 [nucleoplasm]
(Sus scrofa)
CLP1 [nucleoplasm]
(Xenopus tropicalis)
Cross References
RefSeq
NP_001136069.1
,
NP_006822.1
ENSEMBL
ENST00000681650
,
ENSP00000434995
,
ENST00000302731
,
ENSP00000304704
,
ENST00000533682
,
ENSP00000506714
,
ENSP00000436066
,
ENST00000525602
OpenTargets
ENSG00000172409
IntEnz
2.7.1.78
HPA
ENSG00000172409-CLP1
PRO
Q92989
Pharos - Targets
Q92989
Orphanet
CLP1
PDB
8HMZ
,
8HMY
Interactors (3)
Accession
#Entities
Entities
Confidence Score
Evidence (IntAct)
UniProt:O94913 PCF11
1
PCF11 [nucleoplasm]
(R-HSA-72019)
0.59
3
UniProt:P28074 PSMB5
4
PSMB5 [cytosol]
(R-HSA-68753)
PSMB5 [nucleoplasm]
(R-HSA-174344)
pro-PSMB5 [cytosol]
(R-HSA-9908135)
PSMB5(1-59) [cytosol]
(R-HSA-9908134)
0.556
3
UniProt:Q9UPV0 CEP164
1
CEP164 [cytosol]
(R-HSA-380305)
0.556
3
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