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TTF-I binds to the Sal Box
Stable Identifier
R-HSA-74987
Type
Reaction [binding]
Species
Homo sapiens
Compartment
nucleoplasm
ReviewStatus
5/5
Locations in the PathwayBrowser
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Gene expression (Transcription) (Homo sapiens)
Epigenetic regulation of gene expression (Homo sapiens)
Negative epigenetic regulation of rRNA expression (Homo sapiens)
NoRC negatively regulates rRNA expression (Homo sapiens)
TTF-I binds to the Sal Box (Homo sapiens)
Positive epigenetic regulation of rRNA expression (Homo sapiens)
ERCC6 (CSB) and EHMT2 (G9a) positively regulate rRNA expression (Homo sapiens)
TTF-I binds to the Sal Box (Homo sapiens)
RNA Polymerase I Transcription (Homo sapiens)
RNA Polymerase I Transcription Termination (Homo sapiens)
TTF-I binds to the Sal Box (Homo sapiens)
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As inferred from mouse cell models, the Transcription termination factor (TTF1, also known as TTF-1 and TTF-I) binds an 18 base pair sequence element known as the Sal Box found in multiple copies in the nontranscribed spacer downstream of the 28S rRNA coding region. This element is the termination signal for ribosomal gene transcription. Binding of TTF1 mediates the pausing of the elongating transcription complex. TTF1 has a relatively low affinity for purified DNA but binds cooperatively to chromatin. Oligomers of TTF1 interact in trans to bind adjacent intergenic regions and form loops of the rDNA. Binding of TTF1 to the Sal Box is also influenced by interaction of TTF1 with TIP5 and possibly other proteins.
Literature References
PubMed ID
Title
Journal
Year
7597036
Molecular coevolution of mammalian ribosomal gene terminator sequences and the transcription termination factor TTF-I.
Evers, R
,
Grummt, I
Proc Natl Acad Sci U S A
1995
Participants
Input
Sal Box [nucleoplasm]
(Homo sapiens)
TTF1 [nucleoplasm]
(Homo sapiens)
Output
TTF-I:Sal Box [nucleoplasm]
(Homo sapiens)
Participates
as an event of
RNA Polymerase I Transcription Termination (Homo sapiens)
NoRC negatively regulates rRNA expression (Homo sapiens)
ERCC6 (CSB) and EHMT2 (G9a) positively regulate rRNA expression (Homo sapiens)
Inferred From
Ttf-I binds the T0 region (Sal Box) of the rDNA (Mus musculus)
Authored
Comai, L (2003-07-03)
Reviewed
Iben, S (2016-02-12)
Shiao, YH (2014-02-18)
Created
Comai, L (2003-07-03)
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