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SARNP [nucleoplasm]
Stable Identifier
R-HSA-8849146
Type
Protein [EntityWithAccessionedSequence]
Species
Homo sapiens
Compartment
nucleoplasm
Synonyms
SAP domain-containing ribonucleoprotein, SARNP_HUMAN
Locations in the PathwayBrowser
Expand all
Gene expression (Transcription) (Homo sapiens)
RNA Polymerase II Transcription (Homo sapiens)
RNA Polymerase II Transcription Termination (Homo sapiens)
Cleavage of mRNA at the 3'-end (Homo sapiens)
3' end cleaved, ligated exon containing complex [nucleoplasm] (Homo sapiens)
TREX (DDX39B:ATP) [nucleoplasm] (Homo sapiens)
SARNP [nucleoplasm] (Homo sapiens)
Spliced mRNA:CBC:EJC:TREX [nucleoplasm] (Homo sapiens)
TREX (DDX39B:ATP) [nucleoplasm] (Homo sapiens)
SARNP [nucleoplasm] (Homo sapiens)
Metabolism of RNA (Homo sapiens)
Processing of Capped Intron-Containing Pre-mRNA (Homo sapiens)
Transport of Mature Transcript to Cytoplasm (Homo sapiens)
Transport of Mature mRNA derived from an Intron-Containing Transcript (Homo sapiens)
Docking of the TAP:EJC Complex with the NPC (Homo sapiens)
NXF1,2:NXT1::polyadenylated, capped mRNA:CBC:EJC:TREX:SRSF proteins [nucleoplasm] (Homo sapiens)
capped mRNA:CBC:EJC:TREX (minus DDX39B) [nucleoplasm] (Homo sapiens)
TREX (minus DDX39B) [nucleoplasm] (Homo sapiens)
SARNP [nucleoplasm] (Homo sapiens)
SARNP [nucleoplasm] (Homo sapiens)
NXF1:NXT1 (TAP:p15) binds capped mRNA:CBC:EJC:TREX (minus DDX39B) (Homo sapiens)
NXF1,2:NXT1::polyadenylated, capped mRNA:CBC:EJC:TREX:SRSF proteins [nucleoplasm] (Homo sapiens)
capped mRNA:CBC:EJC:TREX (minus DDX39B) [nucleoplasm] (Homo sapiens)
TREX (minus DDX39B) [nucleoplasm] (Homo sapiens)
SARNP [nucleoplasm] (Homo sapiens)
polyadenylated, capped mRNA:CBC:EJC:TREX:SRSF proteins [nucleoplasm] (Homo sapiens)
TREX (DDX39B:ATP) [nucleoplasm] (Homo sapiens)
SARNP [nucleoplasm] (Homo sapiens)
mRNA 3'-end processing (Homo sapiens)
Cleavage of mRNA at the 3'-end (Homo sapiens)
3' end cleaved, ligated exon containing complex [nucleoplasm] (Homo sapiens)
TREX (DDX39B:ATP) [nucleoplasm] (Homo sapiens)
SARNP [nucleoplasm] (Homo sapiens)
Spliced mRNA:CBC:EJC:TREX [nucleoplasm] (Homo sapiens)
TREX (DDX39B:ATP) [nucleoplasm] (Homo sapiens)
SARNP [nucleoplasm] (Homo sapiens)
TREX complex binds spliced, capped mRNA:CBC:EJC cotranscriptionally (Homo sapiens)
SARNP [nucleoplasm] (Homo sapiens)
Spliced mRNA:CBC:EJC:TREX [nucleoplasm] (Homo sapiens)
TREX (DDX39B:ATP) [nucleoplasm] (Homo sapiens)
SARNP [nucleoplasm] (Homo sapiens)
mRNA polyadenylation (Homo sapiens)
3' end cleaved, ligated exon containing complex [nucleoplasm] (Homo sapiens)
TREX (DDX39B:ATP) [nucleoplasm] (Homo sapiens)
SARNP [nucleoplasm] (Homo sapiens)
polyadenylated, capped mRNA:CBC:EJC:TREX:SRSF proteins [nucleoplasm] (Homo sapiens)
TREX (DDX39B:ATP) [nucleoplasm] (Homo sapiens)
SARNP [nucleoplasm] (Homo sapiens)
External Reference Information
External Reference
UniProt:P82979 SARNP
Gene Names
SARNP, HCC1, HSPC316
Chain
initiator methionine:, chain:2-210
Reference Genes
BioGPS Gene:84324 SARNP
COSMIC (genes):SARNP SARNP
CTD Gene:84324 SARNP
dbSNP Gene:84324 SARNP
ENSEMBL:ENSG00000205323 SARNP
HGNC:24432 SARNP
KEGG:hsa:84324 SARNP
Monarch:84324 SARNP
NCBI Gene:84324 SARNP
OMIM:610049 SARNP
UCSC:P82979 SARNP
Reference Transcript
RefSeq:NM_033082.3 SARNP
Other Identifiers
11734863_a_at
11734864_x_at
11744341_s_at
11748556_a_at
16765765
224914_PM_s_at
224914_s_at
229069_PM_at
229069_at
3457202
3457203
3457204
3457205
3457207
3457208
3457209
3457220
3457221
3457222
3457223
3457224
3457225
3457226
3457230
3457231
3457234
3457241
3457242
48831_at
63601_at
65915_at
7963923
84324
A_23_P43946
A_32_P165713
GO:0000122
GO:0000346
GO:0003677
GO:0003682
GO:0003723
GO:0005515
GO:0005634
GO:0005654
GO:0006355
GO:0006406
GO:0006417
GO:0006913
GO:0016607
GO:0016973
GO:0036464
GO:0043226
GO:0051028
HMNXSV003012198
Hs.63908.0.S1_3p_at
Hs.63908.1.S1_3p_a_at
Hs.63908.1.S1_3p_x_at
ILMN_1680967
PH_hs_0024831
TC12002906.hg
TC12003278.hg
Participates
as an input of
TREX complex binds spliced, capped mRNA:CBC:EJC cotranscriptionally (Homo sapiens)
as a component of
TREX (DDX39B:ATP) [nucleoplasm] (Homo sapiens)
TREX (minus DDX39B) [nucleoplasm] (Homo sapiens)
as an output of
Docking of the TAP:EJC Complex with the NPC (Homo sapiens)
Inferred To
CIP29 [nucleoplasm]
(Bos taurus)
SARNP [nucleoplasm]
(Caenorhabditis elegans)
SARNP [nucleoplasm]
(Canis familiaris)
SARNP [nucleoplasm]
(Dictyostelium discoideum)
SARNP [nucleoplasm]
(Gallus gallus)
SARNP [nucleoplasm]
(Sus scrofa)
Sarnp [nucleoplasm]
(Mus musculus)
Sarnp [nucleoplasm]
(Rattus norvegicus)
Dmel\CG8149 [nucleoplasm]
(Drosophila melanogaster)
Cross References
RefSeq
NP_149073.1
ENSEMBL
ENST00000336133
,
ENST00000546604
,
ENSP00000337632
,
ENSP00000449409
OpenTargets
ENSG00000205323
HPA
ENSG00000205323-SARNP
PRO
P82979
Pharos - Targets
P82979
GlyGen
P82979
PDB
2DO1
Interactors (16)
Accession
#Entities
Entities
Confidence Score
Evidence (IntAct)
UniProt:Q13838 DDX39B
2
DDX39B [nucleoplasm]
(R-HSA-8849139)
DDX39B [cytosol]
(R-HSA-9715154)
0.801
7
UniProt:O00148 DDX39A
1
DDX39A [nucleoplasm]
(R-HSA-8852237)
0.743
6
UniProt:Q96FV9 THOC1
1
THOC1 [nucleoplasm]
(R-HSA-8849130)
0.643
3
UniProt:Q6Y2X3 DJC14
0.641
3
UniProt:O75152 ZC3H11A
1
ZC3H11A [nucleoplasm]
(R-HSA-8850659)
0.615
4
UniProt:O76024 WFS1
3
WFS1 [endoplasmic reticulum lumen]
(R-HSA-8956747)
p-WFS1 [endoplasmic reticulum lumen]
(R-HSA-8956998)
WFS1 [endoplasmic reticulum membrane]
(R-HSA-535474)
0.556
3
UniProt:Q9Y3X0 CCDC9
0.527
2
UniProt:P61326 MAGOH
1
MAGOH [nucleoplasm]
(R-HSA-156658)
0.527
2
UniProt:Q8WVZ9 KBTBD7
1
KBTBD7 [cytosol]
(R-HSA-5658415)
0.527
3
UniProt:Q66LE6 PPP2R2D
1
PPP2R2D [nucleoplasm]
(R-HSA-2160962)
0.527
3
UniProt:P52943 CRIP2
0.527
2
UniProt:Q13427 PPIG
2
PPIG [nucleoplasm]
(R-HSA-9769592)
PPIG [cytosol]
(R-HSA-9728768)
0.527
2
UniProt:Q96QD9 FYTTD1
1
FYTTD1 [nucleoplasm]
(R-HSA-8852176)
0.527
3
UniProt:Q9UKV3 ACIN1
4
ACIN1 [cytosol]
(R-HSA-212519)
ACIN1(1094-1341) [cytosol]
(R-HSA-212516)
ACIN1(1-1093) [cytosol]
(R-HSA-212520)
ACIN1 [nucleoplasm]
(R-HSA-9770238)
0.527
2
UniProt:P26368 U2AF2
2
U2AF2 [nucleoplasm]
(R-HSA-71987)
5OHK15,276-U2AF2 [nucleoplasm]
(R-HSA-9630011)
0.471
3
UniProt:Q01081 U2AF1
1
U2AF1 [nucleoplasm]
(R-HSA-71985)
0.471
3
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