Toggle navigation
About
What is Reactome ?
News
Team
Scientific Advisory Board
Funding
Editorial Calendar
Release Calendar
Statistics
Our Logo
License Agreement
Privacy Notice
Disclaimer
Digital Preservation
Contact us
Content
Table of Contents
DOIs
Data Schema
Reactome Research Spotlight
ORCID Integration Project
COVID-19 Disease Pathways
Docs
Userguide
Pathway Browser
How do I search ?
Details Panel
Analysis Tools
Analysis Data
Analysis Gene Expression
Species Comparison
Tissue Distribution
Diseases
Cytomics
Review Status of Reactome Events
ReactomeFIViz
Developer's Zone
Graph Database
Analysis Service
Content Service
Pathways Overview
Pathway Diagrams
Icon Info
EHLD Specs & Guidelines
Icon Library Guidelines
Data Model
Curator Guide
Release Documentation
Computationally inferred events
FAQ
Linking to Us
Citing us
Tools
Pathway Browser
Analyse gene list
Analyse gene expression
Species Comparison
Tissue Distribution
Analysis Service
Content Service
ReactomeFIViz
Advanced Data Search
Site Search
Community
Contribute Pathway Knowledge
Icon Library
Outreach
Events
Publications
Partners
Contributors
Resources Guide
Download
About
What is Reactome ?
News
Team
Scientific Advisory Board
Funding
Editorial Calendar
Release Calendar
Statistics
Our Logo
License Agreement
Privacy Notice
Disclaimer
Digital Preservation
Contact us
Content
Table of Contents
DOIs
Data Schema
Reactome Research Spotlight
ORCID Integration Project
COVID-19 Disease Pathways
Docs
Userguide
Pathway Browser
How do I search ?
Details Panel
Analysis Tools
Analysis Data
Analysis Gene Expression
Species Comparison
Tissue Distribution
Diseases
Cytomics
Review Status of Reactome Events
ReactomeFIViz
Developer's Zone
Graph Database
Analysis Service
Content Service
Pathways Overview
Pathway Diagrams
Icon Info
EHLD Specs & Guidelines
Icon Library Guidelines
Data Model
Curator Guide
Release Documentation
Computationally inferred events
FAQ
Linking to Us
Citing us
Tools
Pathway Browser
Analyse gene list
Analyse gene expression
Species Comparison
Tissue Distribution
Analysis Service
Content Service
ReactomeFIViz
Advanced Data Search
Site Search
Community
Contribute Pathway Knowledge
Icon Library
Outreach
Events
Publications
Partners
Contributors
Resources Guide
Download
Search ...
Go!
EIF4A3 [nucleoplasm]
Stable Identifier
R-HSA-8849149
Type
Protein [EntityWithAccessionedSequence]
Species
Homo sapiens
Compartment
nucleoplasm
Synonyms
Eukaryotic initiation factor 4A-III, IF4A3_HUMAN
Locations in the PathwayBrowser
Expand all
Gene expression (Transcription) (Homo sapiens)
RNA Polymerase II Transcription (Homo sapiens)
RNA Polymerase II Transcription Termination (Homo sapiens)
Cleavage of mRNA at the 3'-end (Homo sapiens)
3' end cleaved, ligated exon containing complex [nucleoplasm] (Homo sapiens)
EJC [nucleoplasm] (Homo sapiens)
Core EJC [nucleoplasm] (Homo sapiens)
EIF4A3 [nucleoplasm] (Homo sapiens)
Spliced mRNA:CBC:EJC:TREX [nucleoplasm] (Homo sapiens)
EJC [nucleoplasm] (Homo sapiens)
Core EJC [nucleoplasm] (Homo sapiens)
EIF4A3 [nucleoplasm] (Homo sapiens)
Metabolism of RNA (Homo sapiens)
Processing of Capped Intron-Containing Pre-mRNA (Homo sapiens)
Transport of Mature Transcript to Cytoplasm (Homo sapiens)
Transport of Mature mRNA derived from an Intron-Containing Transcript (Homo sapiens)
Docking of the TAP:EJC Complex with the NPC (Homo sapiens)
NPC:NXF1,2:NXT1:EJC:CBC:mRNA [nucleoplasm] (Homo sapiens)
EJC [nucleoplasm] (Homo sapiens)
Core EJC [nucleoplasm] (Homo sapiens)
EIF4A3 [nucleoplasm] (Homo sapiens)
NXF1,2:NXT1::polyadenylated, capped mRNA:CBC:EJC:TREX:SRSF proteins [nucleoplasm] (Homo sapiens)
capped mRNA:CBC:EJC:TREX (minus DDX39B) [nucleoplasm] (Homo sapiens)
EJC [nucleoplasm] (Homo sapiens)
Core EJC [nucleoplasm] (Homo sapiens)
EIF4A3 [nucleoplasm] (Homo sapiens)
NXF1:NXT1 (TAP:p15) binds capped mRNA:CBC:EJC:TREX (minus DDX39B) (Homo sapiens)
NXF1,2:NXT1::polyadenylated, capped mRNA:CBC:EJC:TREX:SRSF proteins [nucleoplasm] (Homo sapiens)
capped mRNA:CBC:EJC:TREX (minus DDX39B) [nucleoplasm] (Homo sapiens)
EJC [nucleoplasm] (Homo sapiens)
Core EJC [nucleoplasm] (Homo sapiens)
EIF4A3 [nucleoplasm] (Homo sapiens)
polyadenylated, capped mRNA:CBC:EJC:TREX:SRSF proteins [nucleoplasm] (Homo sapiens)
EJC [nucleoplasm] (Homo sapiens)
Core EJC [nucleoplasm] (Homo sapiens)
EIF4A3 [nucleoplasm] (Homo sapiens)
Transport of the export-competent mRNP complex through the NPC (Homo sapiens)
NPC:NXF1,2:NXT1:EJC:CBC:mRNA [nucleoplasm] (Homo sapiens)
EJC [nucleoplasm] (Homo sapiens)
Core EJC [nucleoplasm] (Homo sapiens)
EIF4A3 [nucleoplasm] (Homo sapiens)
mRNA 3'-end processing (Homo sapiens)
Cleavage of mRNA at the 3'-end (Homo sapiens)
3' end cleaved, ligated exon containing complex [nucleoplasm] (Homo sapiens)
EJC [nucleoplasm] (Homo sapiens)
Core EJC [nucleoplasm] (Homo sapiens)
EIF4A3 [nucleoplasm] (Homo sapiens)
Spliced mRNA:CBC:EJC:TREX [nucleoplasm] (Homo sapiens)
EJC [nucleoplasm] (Homo sapiens)
Core EJC [nucleoplasm] (Homo sapiens)
EIF4A3 [nucleoplasm] (Homo sapiens)
TREX complex binds spliced, capped mRNA:CBC:EJC cotranscriptionally (Homo sapiens)
Spliced mRNA:CBC:EJC:TREX [nucleoplasm] (Homo sapiens)
EJC [nucleoplasm] (Homo sapiens)
Core EJC [nucleoplasm] (Homo sapiens)
EIF4A3 [nucleoplasm] (Homo sapiens)
Spliced mRNP [nucleoplasm] (Homo sapiens)
EJC [nucleoplasm] (Homo sapiens)
Core EJC [nucleoplasm] (Homo sapiens)
EIF4A3 [nucleoplasm] (Homo sapiens)
mRNA polyadenylation (Homo sapiens)
3' end cleaved, ligated exon containing complex [nucleoplasm] (Homo sapiens)
EJC [nucleoplasm] (Homo sapiens)
Core EJC [nucleoplasm] (Homo sapiens)
EIF4A3 [nucleoplasm] (Homo sapiens)
polyadenylated, capped mRNA:CBC:EJC:TREX:SRSF proteins [nucleoplasm] (Homo sapiens)
EJC [nucleoplasm] (Homo sapiens)
Core EJC [nucleoplasm] (Homo sapiens)
EIF4A3 [nucleoplasm] (Homo sapiens)
mRNA Splicing (Homo sapiens)
mRNA Splicing - Major Pathway (Homo sapiens)
Formation of the Spliceosomal B* complex (Homo sapiens)
Spliceosomal B* complex [nucleoplasm] (Homo sapiens)
Core EJC [nucleoplasm] (Homo sapiens)
EIF4A3 [nucleoplasm] (Homo sapiens)
Spliceosomal Bact complex [nucleoplasm] (Homo sapiens)
EIF4A3 [nucleoplasm] (Homo sapiens)
Formation of the Spliceosomal Bact complex (Homo sapiens)
EIF4A3 [nucleoplasm] (Homo sapiens)
Spliceosomal Bact complex [nucleoplasm] (Homo sapiens)
EIF4A3 [nucleoplasm] (Homo sapiens)
Formation of the Spliceosomal C* complex (Homo sapiens)
Spliceosomal C complex [nucleoplasm] (Homo sapiens)
Core EJC [nucleoplasm] (Homo sapiens)
EIF4A3 [nucleoplasm] (Homo sapiens)
Spliceosomal C* complex [nucleoplasm] (Homo sapiens)
Core EJC [nucleoplasm] (Homo sapiens)
EIF4A3 [nucleoplasm] (Homo sapiens)
Formation of the Spliceosomal P complex and exon ligation (Homo sapiens)
Spliceosomal C* complex [nucleoplasm] (Homo sapiens)
Core EJC [nucleoplasm] (Homo sapiens)
EIF4A3 [nucleoplasm] (Homo sapiens)
Spliceosomal P complex [nucleoplasm] (Homo sapiens)
spliced mRNA:EJC:CBC complex:Alternative splicing factor [nucleoplasm] (Homo sapiens)
EJC [nucleoplasm] (Homo sapiens)
Core EJC [nucleoplasm] (Homo sapiens)
EIF4A3 [nucleoplasm] (Homo sapiens)
Spliceosomal P complex dissociates yielding the intron-containing complex (ILS) and the spliced mRNP (new) (Homo sapiens)
Spliceosomal P complex [nucleoplasm] (Homo sapiens)
spliced mRNA:EJC:CBC complex:Alternative splicing factor [nucleoplasm] (Homo sapiens)
EJC [nucleoplasm] (Homo sapiens)
Core EJC [nucleoplasm] (Homo sapiens)
EIF4A3 [nucleoplasm] (Homo sapiens)
spliced mRNA:EJC:CBC complex:Alternative splicing factor [nucleoplasm] (Homo sapiens)
EJC [nucleoplasm] (Homo sapiens)
Core EJC [nucleoplasm] (Homo sapiens)
EIF4A3 [nucleoplasm] (Homo sapiens)
External Reference Information
External Reference
UniProt:P38919 EIF4A3
Gene Names
EIF4A3, DDX48, KIAA0111
Chain
chain:1-411, initiator methionine:, chain:2-411
Reference Genes
BioGPS Gene:9775 EIF4A3
COSMIC (genes):EIF4A3 EIF4A3
CTD Gene:9775 EIF4A3
dbSNP Gene:9775 EIF4A3
ENSEMBL:ENSG00000141543 EIF4A3
ENSEMBL_homo_sapiens_GENE:ENSG00000141543.12 EIF4A3
ENSEMBL_homo_sapiens_GENE:ENSG00000291508.1 EIF4A3
HGNC:18683 EIF4A3
KEGG Gene (Homo sapiens):9775 EIF4A3
Monarch:9775 EIF4A3
NCBI Gene:9775 EIF4A3
OMIM:608546 EIF4A3
UCSC:P38919 EIF4A3
Reference Transcript
RefSeq:NM_014740.3 EIF4A3
Other Identifiers
11756176_a_at
16849667
201303_PM_at
201303_at
3773311
3773313
3773314
3773316
3773318
3773321
3773324
3773326
3773327
3773328
3773329
3773332
3773334
3773335
3773336
3773337
3773338
3773339
38031_at
8019046
9775
A_23_P141636
D21853_at
GE57117
GO:0000166
GO:0000184
GO:0000398
GO:0003676
GO:0003723
GO:0003724
GO:0003729
GO:0003824
GO:0004386
GO:0005515
GO:0005524
GO:0005634
GO:0005654
GO:0005681
GO:0005730
GO:0005737
GO:0005829
GO:0006364
GO:0006397
GO:0006406
GO:0006417
GO:0006913
GO:0008143
GO:0008306
GO:0008380
GO:0010629
GO:0014070
GO:0016020
GO:0016071
GO:0016607
GO:0016787
GO:0016887
GO:0017148
GO:0023052
GO:0030425
GO:0035145
GO:0035368
GO:0035613
GO:0035640
GO:0042254
GO:0043021
GO:0043025
GO:0043226
GO:0045727
GO:0048701
GO:0048856
GO:0050877
GO:0051028
GO:0071006
GO:0071013
GO:0072715
GO:0090394
GO:0098794
GO:0098978
GO:0099578
GO:0140098
GO:0140657
GO:1904570
GO:1990416
GO:1990904
GO:2000622
HMNXSV003023654
ILMN_1667043
PH_hs_0024508
TC17001933.hg
g7661919_3p_at
Participates
as a component of
Spliceosomal Bact complex [nucleoplasm] (Homo sapiens)
Spliceosomal Intermediate C Complex [nucleoplasm] (Homo sapiens)
Core EJC [nucleoplasm] (Homo sapiens)
as an input of
Formation of the Spliceosomal Bact complex (Homo sapiens)
Other forms of this molecule
EIF4A3 [cytosol]
Inferred To
EIF4A3 [nucleoplasm]
(Bos taurus)
EIF4A3 [nucleoplasm]
(Canis familiaris)
EIF4A3 [nucleoplasm]
(Danio rerio)
EIF4A3 [nucleoplasm]
(Dictyostelium discoideum)
EIF4A3 [nucleoplasm]
(Drosophila melanogaster)
EIF4A3 [nucleoplasm]
(Gallus gallus)
EIF4A3 [nucleoplasm]
(Mus musculus)
EIF4A3 [nucleoplasm]
(Plasmodium falciparum)
EIF4A3 [nucleoplasm]
(Rattus norvegicus)
EIF4A3 [nucleoplasm]
(Saccharomyces cerevisiae)
EIF4A3 [nucleoplasm]
(Schizosaccharomyces pombe)
EIF4A3 [nucleoplasm]
(Sus scrofa)
EIF4A3 [nucleoplasm]
(Xenopus tropicalis)
eif-4a3 [nucleoplasm]
(Caenorhabditis elegans)
Cross References
RefSeq
NP_055555.1
OpenTargets
ENSG00000141543
GeneCards
P38919
HPA
ENSG00000141543-EIF4A3
Ensembl
ENST00000647795
,
ENSP00000497641
,
ENST00000649764
,
ENSP00000497661
,
ENSG00000141543
PRO
P38919
Pharos - Targets
P38919
Orphanet
22596
HMDB Protein
HMDBP11795
PDB
7W5A
,
7ZNJ
,
3EX7
,
5XJC
,
6ICZ
,
7W5B
,
5YZG
,
2XB2
,
2J0U
,
8C6J
,
2HXY
,
2J0S
,
6YVH
,
7W59
,
2J0Q
,
7A5P
,
2HYI
,
4C9B
,
5MQF
,
6QDV
Interactors (62)
Accession
#Entities
Entities
Confidence Score
Evidence (IntAct)
UniProt:O15234 CASC3
2
CASC3 [cytosol]
(R-HSA-927807)
CASC3 [nucleoplasm]
(R-HSA-8849148)
0.98
37
UniProt:Q9Y5S9 RBM8A
2
RBM8A [cytosol]
(R-HSA-162462)
RBM8A [nucleoplasm]
(R-HSA-156659)
0.947
22
UniProt:P61326 MAGOH
1
MAGOH [nucleoplasm]
(R-HSA-156658)
0.938
30
UniProt:Q9BZI7 UPF3B
2
UPF3B [nucleoplasm]
(R-HSA-156776)
UPF3B [cytosol]
(R-HSA-159258)
0.883
9
UniProt:Q9HCG8 CWC22
1
CWC22 [nucleoplasm]
(R-HSA-8865956)
0.815
6
UniProt:Q6PII3 CC174
0.743
5
UniProt:Q92900-2 UPF1
0.725
4
UniProt:Q53EL6 PDCD4
1
PDCD4 [cytosol]
(R-HSA-5432887)
0.718
6
UniProt:Q96Q15 SMG1
1
SMG1 [cytosol]
(R-HSA-927760)
0.69
4
UniProt:Q5C9Z4 NOM1
0.688
4
UniProt:Q07955 SRSF1
1
SRSF1 [nucleoplasm]
(R-HSA-72031)
0.662
7
UniProt:Q9Y5S9-1 RBM8A
0.643
6
UniProt:Q9H307 PNN
1
PNN [nucleoplasm]
(R-HSA-9770779)
0.643
3
UniProt:P09651 HNRNPA1
2
HNRNPA1 [cytosol]
(R-HSA-9727902)
HNRNPA1 [nucleoplasm]
(R-HSA-71927)
0.643
3
UniProt:Q9BY77 POLDIP3
2
POLDIP3 [nucleoplasm]
(R-HSA-8850646)
POLDIP3 [cytosol]
(R-HSA-8850627)
0.623
3
UniProt:Q86V81 ALYREF
2
ALYREF [nucleoplasm]
(R-HSA-156649)
ALYREF [cytosol]
(R-HSA-158482)
0.597
3
UniProt:P84103 SRSF3
1
SRSF3 [nucleoplasm]
(R-HSA-72035)
0.597
3
UniProt:Q9Y2W1 THRAP3
1
THRAP3 [nucleoplasm]
(R-HSA-8932115)
0.564
2
UniProt:Q15287 RNPS1
2
RNPS1 [nucleoplasm]
(R-HSA-156778)
RNPS1 [cytosol]
(R-HSA-159256)
0.558
4
UniProt:Q96GN5 CDA7L
0.556
3
UniProt:Q96D03 DDT4L
0.556
3
UniProt:Q9H257-2 CARD9
0.556
3
UniProt:Q9H8Y1 VRTN
0.556
3
UniProt:Q9NRI5-2 DISC1
0.556
3
UniProt:P25786 PSMA1
2
PSMA1 [nucleoplasm]
(R-HSA-174333)
PSMA1 [cytosol]
(R-HSA-68724)
0.556
3
UniProt:Q6P9H4 CNKR3
0.556
3
UniProt:P62487 POLR2G
1
POLR2G [nucleoplasm]
(R-HSA-63517)
0.556
3
UniProt:Q3KNR5 Q3KNR5
0.556
3
UniProt:P14373 TRIM27
2
TRIM27 [nucleoplasm]
(R-HSA-2997690)
TRIM27 [cytosol]
(R-HSA-8851002)
0.556
3
UniProt:Q9NY93 DDX56
0.556
3
UniProt:Q04864-2 REL
0.556
3
UniProt:Q8TBB1 LNX1
1
LNX1 [cytosol]
(R-HSA-8851641)
0.556
3
UniProt:Q96KQ7 EHMT2
1
EHMT2 [nucleoplasm]
(R-HSA-212151)
0.556
3
UniProt:Q6FHY5 Q6FHY5
0.556
3
UniProt:P98169 ZXDB
0.556
3
UniProt:P50221 MEOX1
0.556
3
UniProt:P55039 DRG2
2
3OHK21-DRG2 [cytosol]
(R-HSA-9629595)
DRG2 [cytosol]
(R-HSA-9629597)
0.556
3
UniProt:Q9GZT8 NIF3L
0.556
3
UniProt:O14744 PRMT5
3
p-Y297,304,307-PRMT5 [nucleoplasm]
(R-HSA-5211300)
PRMT5 [nucleoplasm]
(R-HSA-5205609)
PRMT5 [cytosol]
(R-HSA-191876)
0.556
3
UniProt:Q9NRD5 PICK1
2
PICK1 [plasma membrane]
(R-HSA-416989)
PICK1 [endocytic vesicle membrane]
(R-HSA-417017)
0.556
3
UniProt:P61981 YWHAG
1
YWHAG [cytosol]
(R-HSA-380312)
0.536
2
UniProt:O60306 AQR
1
AQR [nucleoplasm]
(R-HSA-6781960)
0.528
2
UniProt:Q9Y3X0 CCDC9
0.527
2
UniProt:P60842 EIF4A1
1
EIF4A1 [cytosol]
(R-HSA-72573)
0.527
2
UniProt:O75533 SF3B1
1
SF3B1 [nucleoplasm]
(R-HSA-71968)
0.527
2
UniProt:Q8N653 LZTR1
0.527
2
UniProt:Q13573 SNW1
1
SNW1 [nucleoplasm]
(R-HSA-351663)
0.527
2
UniProt:Q99459 CDC5L
1
CDC5L [nucleoplasm]
(R-HSA-5420887)
0.527
2
UniProt:Q15459 SF3A1
1
SF3A1 [nucleoplasm]
(R-HSA-71962)
0.527
2
UniProt:Q8TAD8 SNIP1
1
SNIP1 [nucleoplasm]
(R-HSA-3222315)
0.527
2
UniProt:Q53F19 NCBP3
0.527
4
UniProt:Q09161 NCBP1
2
NCBP1 [nucleoplasm]
(R-HSA-51469)
NCBP1 [cytosol]
(R-HSA-162459)
0.527
6
UniProt:P14678 SNRPB
4
SNRPB [nucleoplasm]
(R-HSA-71896)
Me2-R108,R112-SNRPB [nucleoplasm]
(R-HSA-192213)
SNRPB [cytosol]
(R-HSA-191798)
2xMe-SNRPB [cytosol]
(R-HSA-192218)
0.527
2
UniProt:P52298 NCBP2
2
NCBP2 [nucleoplasm]
(R-HSA-51463)
NCBP2 [cytosol]
(R-HSA-162458)
0.527
5
UniProt:Q13523 PRPF4B
1
PRPF4B [nucleoplasm]
(R-HSA-9769525)
0.527
2
UniProt:Q14498 RBM39
1
RBM39 [nucleoplasm]
(R-HSA-9770254)
0.527
2
UniProt:P07910 HNRNPC
3
HNRNPC [cytosol]
(R-HSA-9715136)
SUMO1-K250-HNRNPC [nucleoplasm]
(R-HSA-4570543)
HNRNPC [nucleoplasm]
(R-HSA-71933)
0.527
2
UniProt:P67809 YBX1
5
p-S32,S36-YBX1 [nucleoplasm]
(R-HSA-9733227)
p-S32,S36-YBX1 [cytosol]
(R-HSA-9736837)
YBX1 [cytosol]
(R-HSA-9736840)
YBX1 [nucleoplasm]
(R-HSA-72041)
YBX1 [extracellular region]
(R-HSA-9017791)
0.527
2
UniProt:Q16629 SRSF7
1
SRSF7 [nucleoplasm]
(R-HSA-72029)
0.527
2
UniProt:O00422 SAP18
1
SAP18 [nucleoplasm]
(R-HSA-351694)
0.499
3
UniProt:P13569 CFTR
17
PolyUb-CFTR [clathrin-coated endocytic vesicle membrane]
(R-HSA-8869104)
PolyUb-CFTR [plasma membrane]
(R-HSA-8867595)
CFTR [lysosomal membrane]
(R-HSA-5627279)
CFTR [Golgi-associated vesicle membrane]
(R-HSA-5627079)
CFTR [endosome membrane]
(R-HSA-6782965)
PolyUb-CFTR [endosome membrane]
(R-HSA-6782976)
CFTR F508del [endoplasmic reticulum membrane]
(R-HSA-8866834)
ub-CFTR F508del [cytosol]
(R-HSA-8866838)
ub-CFTR F508del [endoplasmic reticulum membrane]
(R-HSA-8866842)
CFTR G542* [plasma membrane]
(R-HSA-5678986)
CFTR G551D [plasma membrane]
(R-HSA-5678977)
CFTR W1282* [plasma membrane]
(R-HSA-5678976)
CFTR F508del [plasma membrane]
(R-HSA-5678978)
CFTR N1303K [plasma membrane]
(R-HSA-5678983)
CFTR [plasma membrane]
(R-HSA-383188)
CFTR [endoplasmic reticulum membrane]
(R-HSA-8866837)
misfolded CFTR [endoplasmic reticulum membrane]
(R-HSA-8868730)
0.483
5
UniProt:Q13838 DDX39B
2
DDX39B [cytosol]
(R-HSA-9715154)
DDX39B [nucleoplasm]
(R-HSA-8849139)
0.462
2
© 2024
Reactome
Cite Us!
Cite Us!
Cite Us!
Warning!
Unable to extract citation. Please try again later.
Download As:
BibTeX
RIS
Text