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HDLBP [plasma membrane]
Stable Identifier
R-HSA-8858026
Type
Protein [EntityWithAccessionedSequence]
Species
Homo sapiens
Compartment
plasma membrane
Synonyms
Vigilin, VIGLN_HUMAN
Locations in the PathwayBrowser
Expand all
Transport of small molecules (Homo sapiens)
Plasma lipoprotein assembly, remodeling, and clearance (Homo sapiens)
Plasma lipoprotein clearance (Homo sapiens)
HDL clearance (Homo sapiens)
HDLBP binds HDL (Homo sapiens)
HDLBP [plasma membrane] (Homo sapiens)
HDLBP:HDL [plasma membrane] (Homo sapiens)
HDLBP [plasma membrane] (Homo sapiens)
External Reference Information
External Reference
UniProt:Q00341 HDLBP
Gene Names
HDLBP, HBP, VGL
Chain
initiator methionine:, chain:2-1268
Reference Genes
BioGPS Gene:3069 HDLBP
COSMIC (genes):HDLBP HDLBP
CTD Gene:3069 HDLBP
dbSNP Gene:3069 HDLBP
ENSEMBL:ENSG00000115677 HDLBP
ENSEMBL_homo_sapiens_GENE:ENSG00000115677.18 HDLBP
HGNC:4857 HDLBP
KEGG Gene (Homo sapiens):3069 HDLBP
Monarch:3069 HDLBP
NCBI Gene:3069 HDLBP
OMIM:142695 HDLBP
UCSC:Q00341 HDLBP
Reference Transcript
RefSeq:NM_001243900.2 HDLBP
RefSeq:NM_005336.5 HDLBP
RefSeq:XM_017003940.1 HDLBP
RefSeq:NM_001320966.1 HDLBP
RefSeq:XM_005247002.3 HDLBP
RefSeq:XM_006712475.3 HDLBP
RefSeq:NM_203346.4 HDLBP
RefSeq:NM_001320965.1 HDLBP
RefSeq:XM_011511060.2 HDLBP
RefSeq:XM_005247003.4 HDLBP
RefSeq:XM_011511058.2 HDLBP
Other Identifiers
11735103_a_at
11735104_x_at
11743459_x_at
11752159_a_at
11755821_x_at
11757505_a_at
11758610_s_at
16910375
200643_PM_at
200643_at
221767_PM_x_at
221767_x_at
222916_PM_s_at
222916_s_at
225012_PM_at
225012_at
2607111
2607112
2607113
2607114
2607115
2607116
2607117
2607118
2607120
2607121
2607124
2607126
2607128
2607129
2607132
2607134
2607138
2607141
2607144
2607146
2607148
2607151
2607152
2607153
2607154
2607156
2607161
2607162
2607164
2607168
2607170
2607172
2607173
2607175
2607176
2607177
2607184
3069
31504_at
45523_s_at
50246_at
8060225
GE62600
GO:0003676
GO:0003723
GO:0003729
GO:0005515
GO:0005576
GO:0005615
GO:0005634
GO:0005737
GO:0005844
GO:0005886
GO:0006629
GO:0006869
GO:0008202
GO:0008203
GO:0008289
GO:0034364
GO:0043226
GO:0045296
HMNXSV003004483
Hs.283473.0.S1_3p_a_at
ILMN_1699797
ILMN_1756426
M64098_at
PH_hs_0040161
Participates
as a component of
HDLBP:HDL [plasma membrane] (Homo sapiens)
as an input of
HDLBP binds HDL (Homo sapiens)
Inferred To
Hdlbp [plasma membrane]
(Mus musculus)
Hdlbp [plasma membrane]
(Rattus norvegicus)
SCP160 [plasma membrane]
(Saccharomyces cerevisiae)
vgln-1 [plasma membrane]
(Caenorhabditis elegans)
Dp1 [plasma membrane]
(Drosophila melanogaster)
HDLBP [plasma membrane]
(Bos taurus)
HDLBP [plasma membrane]
(Canis familiaris)
HDLBP [plasma membrane]
(Gallus gallus)
HDLBP [plasma membrane]
(Sus scrofa)
hdlbp [plasma membrane]
(Xenopus tropicalis)
vgl1 [plasma membrane]
(Schizosaccharomyces pombe)
Cross References
RefSeq
NP_005327.1
,
XP_005247060.2
,
XP_011509362.1
,
NP_001307895.1
,
XP_006712538.1
,
NP_001307894.1
,
NP_001230829.1
,
XP_011509360.1
,
XP_016859429.1
,
XP_005247059.2
,
NP_976221.1
OpenTargets
ENSG00000115677
HPA
ENSG00000115677-HDLBP
GeneCards
Q00341
Ensembl
ENSP00000399139
,
ENSG00000115677
,
ENST00000427183
PRO
Q00341
Pharos - Targets
Q00341
PDB
2CTM
,
2CTK
,
1VIG
,
2CTE
,
1VIH
,
2CTL
,
2CTJ
,
2CTF
Interactors (3)
Accession
#Entities
Entities
Confidence Score
Evidence (IntAct)
UniProt:P49711 CTCF
1
CTCF [nucleoplasm]
(R-HSA-3782562)
0.581
4
UniProt:Q06787 FMR1
0.547
2
UniProt:Q06609 RAD51
2
RAD51 [nucleoplasm]
(R-HSA-62637)
p-T309-RAD51 [nucleoplasm]
(R-HSA-5685231)
0.499
2
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