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GCFC2 [nucleoplasm]
Stable Identifier
R-HSA-8869311
Type
Protein [EntityWithAccessionedSequence]
Species
Homo sapiens
Compartment
nucleoplasm
Synonyms
GC-rich sequence DNA-binding factor 2, GCFC2_HUMAN
Locations in the PathwayBrowser for interactor UniProt:O94906 PRPF6
Expand all
Metabolism of RNA (Homo sapiens)
Processing of Capped Intron-Containing Pre-mRNA (Homo sapiens)
mRNA Splicing (Homo sapiens)
mRNA Splicing - Major Pathway (Homo sapiens)
Disassembly of the Intron Lariat Spliceosome (new) (Homo sapiens)
GCFC2 [nucleoplasm] (Homo sapiens)
Spliceosomal P complex dissociates yielding the intron-containing complex (ILS) and the spliced mRNP (new) (Homo sapiens)
GCFC2 [nucleoplasm] (Homo sapiens)
External Reference Information
External Reference
UniProt:P16383 GCFC2
Gene Names
GCFC2, C2orf3, GCF, TCF9
Chain
chain:1-781
Reference Genes
BioGPS Gene:6936 GCFC2
COSMIC (genes):GCFC2 GCFC2
CTD Gene:6936 GCFC2
dbSNP Gene:6936 GCFC2
ENSEMBL:ENSG00000005436 GCFC2
HGNC:1317 GCFC2
KEGG:hsa:6936 GCFC2
Monarch:6936 GCFC2
NCBI Gene:6936 GCFC2
OMIM:189901 GCFC2
UCSC:P16383 GCFC2
Reference Transcript
RefSeq:NM_003203.4 GCFC2
RefSeq:NM_001201334.1 GCFC2
RefSeq:NM_001201335.1 GCFC2
Other Identifiers
11739789_a_at
11739790_a_at
11764071_s_at
16899429
210175_PM_at
210175_at
216305_PM_s_at
216305_s_at
2560701
2560703
2560705
2560706
2560707
2560708
2560710
2560711
2560712
2560714
2560717
2560718
2560721
2560725
2560726
2560729
2560730
2560731
2560732
2560733
2560735
2560736
2560738
2560739
2560740
2560742
2560743
2560744
2560745
2560746
2560747
2560748
2560749
2560753
2560755
2560756
2560757
2560758
33315_at
57415_at
6936
8053288
A_21_P0000149
A_23_P120062
A_33_P3355747
GE88601
GO:0000245
GO:0000398
GO:0003677
GO:0005515
GO:0005634
GO:0005654
GO:0005730
GO:0005829
GO:0006397
GO:0008380
GO:0016071
GO:0043226
GO:0065003
GO:0071008
HMNXSV003027707
HMNXSV003027753
HMNXSV003034484
Hs.184175.2.S1_3p_a_at
ILMN_1699724
M29204_at
PH_hs_0022744
TC02002008.hg
g12654086_3p_at
Participates
as an output of
Disassembly of the Intron Lariat Spliceosome (new) (Homo sapiens)
as a component of
Intron Lariat Spliceosome (ILS) [nucleoplasm] (Homo sapiens)
as an input of
Spliceosomal P complex dissociates yielding the intron-containing complex (ILS) and the spliced mRNP (new) (Homo sapiens)
Inferred To
mog-7 [nucleoplasm]
(Caenorhabditis elegans)
GCFC2 [nucleoplasm]
(Bos taurus)
GCFC2 [nucleoplasm]
(Canis familiaris)
GCFC2 [nucleoplasm]
(Dictyostelium discoideum)
GCFC2 [nucleoplasm]
(Gallus gallus)
GCFC2 [nucleoplasm]
(Sus scrofa)
gcfc2 [nucleoplasm]
(Xenopus tropicalis)
Ghost homologue of GCFC2 [nucleoplasm]
(Danio rerio)
Ghost homologue of GCFC2 [nucleoplasm]
(Plasmodium falciparum)
Ghost homologue of GCFC2 [nucleoplasm]
(Schizosaccharomyces pombe)
Dmel\CG1965 [nucleoplasm]
(Drosophila melanogaster)
Gcfc2 [nucleoplasm]
(Mus musculus)
Gcfc2 [nucleoplasm]
(Rattus norvegicus)
Cross References
RefSeq
NP_003194.3
,
NP_001188263.1
,
NP_001188264.1
ENSEMBL
ENSP00000318690
,
ENST00000321027
,
ENSP00000474481
,
ENST00000541687
,
ENST00000409857
,
ENSP00000386552
,
ENSP00000437767
,
ENST00000470503
OpenTargets
ENSG00000005436
HPA
ENSG00000005436-GCFC2
PRO
P16383
Pharos - Targets
P16383
GlyGen
P16383
HMDB Protein
HMDBP07708
Interactors (14)
Accession
#Entities
Entities
Confidence Score
Evidence (IntAct)
UniProt:Q9UBB9 TFIP11
1
TFIP11 [nucleoplasm]
(R-HSA-8869310)
0.666
5
UniProt:Q96DB2 HDAC11
1
HDAC11 [nucleoplasm]
(R-HSA-351590)
0.643
3
UniProt:P09661 SNRPA1
1
SNRPA1 [nucleoplasm]
(R-HSA-71958)
0.527
4
UniProt:P62304 SNRPE
2
SNRPE [cytosol]
(R-HSA-191782)
SNRPE [nucleoplasm]
(R-HSA-71905)
0.527
2
UniProt:Q9NU53 GINM1
0.527
2
UniProt:P68400 CSNK2A1
2
CSNK2A1 [cytosol]
(R-HSA-201713)
CSNK2A1 [nucleoplasm]
(R-HSA-6805057)
0.527
2
UniProt:O75643 SNRNP200
1
SNRNP200 [nucleoplasm]
(R-HSA-71885)
0.527
2
UniProt:P19784 CSNK2A2
2
CSNK2A2 [cytosol]
(R-HSA-201721)
CSNK2A2 [nucleoplasm]
(R-HSA-6805065)
0.527
2
UniProt:Q9BUQ8 DDX23
1
DDX23 [nucleoplasm]
(R-HSA-71879)
0.527
2
UniProt:O95926 SYF2
1
SYF2 [nucleoplasm]
(R-HSA-8867884)
0.527
2
UniProt:Q6P2Q9 PRPF8
1
PRPF8 [nucleoplasm]
(R-HSA-83810)
0.527
2
UniProt:O43143 DHX15
1
DHX15 [nucleoplasm]
(R-HSA-5688097)
0.527
3
UniProt:Q9UMS4 PRPF19
1
PRPF19 [nucleoplasm]
(R-HSA-5420907)
0.527
3
UniProt:O94906 PRPF6
1
PRPF6 [nucleoplasm]
(R-HSA-71881)
0.527
2
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