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RBM7 [nucleoplasm]
Stable Identifier
R-HSA-8985564
Type
Protein [EntityWithAccessionedSequence]
Species
Homo sapiens
Compartment
nucleoplasm
Synonyms
RNA-binding protein 7
Locations in the PathwayBrowser for interactor UniProt:Q01780 EXOSC10
Expand all
Metabolism of RNA (Homo sapiens)
Processing of Capped Intron-Containing Pre-mRNA (Homo sapiens)
mRNA Splicing (Homo sapiens)
mRNA Splicing - Major Pathway (Homo sapiens)
Formation of the Spliceosomal A complex (Homo sapiens)
RBM7 [nucleoplasm] (Homo sapiens)
Formation of the Spliceosomal E complex (Homo sapiens)
RBM7 [nucleoplasm] (Homo sapiens)
External Reference Information
External Reference
UniProt:Q9Y580 RBM7
Gene Names
RBM7
Chain
initiator methionine:, chain:2-266
Reference Genes
BioGPS Gene:10179 RBM7
COSMIC (genes):RBM7 RBM7
CTD Gene:10179 RBM7
dbSNP Gene:10179 RBM7
ENSEMBL:ENSG00000076053 RBM7
HGNC:9904 RBM7
KEGG:hsa:10179 RBM7
Monarch:10179 RBM7
NCBI Gene:10179 RBM7
OMIM:612413 RBM7
UCSC:Q9Y580 RBM7
Reference Transcript
RefSeq:NM_016090.3 RBM7
RefSeq:NM_001286048.1 RBM7
RefSeq:NM_001286046.1 RBM7
RefSeq:NM_001286047.1 RBM7
RefSeq:NM_001286045.1 RBM7
Other Identifiers
10179
11754499_a_at
16731479
218379_PM_at
218379_at
235045_PM_at
235045_at
2561453
2561454
2561455
2561456
2561457
2561458
2561460
3349919
3349920
3349922
3349923
3349926
3349927
3349928
3349929
3349930
3349931
3349932
3349933
3349934
3349935
3349936
3349938
59479_at
64466_at
7944006
A_14_P123172
A_19_P00326348
A_23_P138975
GE55985
GO:0000381
GO:0003676
GO:0003723
GO:0003727
GO:0005515
GO:0005634
GO:0005654
GO:0016073
GO:0016076
GO:0017069
GO:0022414
GO:0043226
GO:0051321
GO:0071889
GO:0097157
HMNXSV003026717
Hs.124177.0.A1_3p_at
ILMN_2183331
PH_hs_0029147
TC11003433.hg
g9994184_3p_at
Participates
as a component of
RBM7:ZCCHC8:SKIV2L2 [nucleoplasm] (Homo sapiens)
Spliceosomal E complex [nucleoplasm] (Homo sapiens)
as an input of
Formation of the Spliceosomal E complex (Homo sapiens)
as an output of
Formation of the Spliceosomal A complex (Homo sapiens)
Inferred To
RBM7 [nucleoplasm]
(Bos taurus)
RBM7 [nucleoplasm]
(Canis familiaris)
RBM7 [nucleoplasm]
(Gallus gallus)
RBM7 [nucleoplasm]
(Sus scrofa)
rbm-7 [nucleoplasm]
(Caenorhabditis elegans)
dRbm7 [nucleoplasm]
(Drosophila melanogaster)
Homologues of RBM7 [nucleoplasm]
(Caenorhabditis elegans)
rnp-8 [nucleoplasm]
(Caenorhabditis elegans)
Rbm7 [nucleoplasm]
(Mus musculus)
Rbm7 [nucleoplasm]
(Rattus norvegicus)
rbm7 [nucleoplasm]
(Xenopus tropicalis)
Cross References
RefSeq
NP_001272975.1
,
NP_057174.1
,
NP_001272977.1
,
NP_001272976.1
,
NP_001272974.1
OpenTargets
ENSG00000076053
ENSEMBL
ENSP00000439918
,
ENST00000540163
HPA
ENSG00000076053-RBM7
PRO
Q9Y580
Pharos - Targets
Q9Y580
GlyGen
Q9Y580
PDB
2M8H
,
7S7B
,
5IQQ
,
5LXY
,
7S7C
,
5LXR
Interactors (29)
Accession
#Entities
Entities
Confidence Score
Evidence (IntAct)
UniProt:Q6NZY4 ZCCHC8
1
ZCCHC8 [nucleoplasm]
(R-HSA-8985573)
0.858
13
UniProt:Q13435 SF3B2
1
SF3B2 [nucleoplasm]
(R-HSA-71971)
0.779
5
UniProt:Q9NQT4 EXOSC5
2
EXOSC5 [cytosol]
(R-HSA-429889)
EXOSC5 [nucleoplasm]
(R-HSA-6791550)
0.725
5
UniProt:P42285 SKIV2L2
1
SKIV2L2 [nucleoplasm]
(R-HSA-6791189)
0.725
5
UniProt:Q66LE6 PPP2R2D
1
PPP2R2D [nucleoplasm]
(R-HSA-2160962)
0.725
6
UniProt:Q04917 YWHAH
1
YWHAH [cytosol]
(R-HSA-1445107)
0.706
4
UniProt:Q15024 EXOSC7
2
EXOSC7 [nucleoplasm]
(R-HSA-6791543)
EXOSC7 [cytosol]
(R-HSA-430030)
0.643
4
UniProt:Q9NQT5 EXOSC3
2
EXOSC3 [nucleoplasm]
(R-HSA-6791572)
EXOSC3 [cytosol]
(R-HSA-430017)
0.643
4
UniProt:Q86VM9 ZCH18
0.643
8
UniProt:P30153 PPP2R1A
2
PPP2R1A [cytosol]
(R-HSA-165982)
PPP2R1A [nucleoplasm]
(R-HSA-165968)
0.643
3
UniProt:Q00005 2ABB
0.597
4
UniProt:Q96CN4 EVI5L
0.556
3
UniProt:A6NC98 CC88B
0.556
3
UniProt:P61978 HNRNPK
2
HNRNPK [nucleoplasm]
(R-HSA-71945)
polySUMO2-K422-HNRNPK [nucleoplasm]
(R-HSA-4570532)
0.553
2
UniProt:O75525 KHDRBS3
2
KHDRSB3 [nucleoplasm]
(R-HSA-8849040)
p-Y-KHDRSB3 [nucleoplasm]
(R-HSA-8849035)
0.553
2
UniProt:Q01780 EXOSC10
1
EXOSC10 [nucleoplasm]
(R-HSA-6791547)
0.527
2
UniProt:P52597 HNRNPF
2
HNRNPF [nucleoplasm]
(R-HSA-71937)
HNRNPF [plasma membrane]
(R-HSA-8950714)
0.527
2
UniProt:P52298 NCBP2
2
NCBP2 [cytosol]
(R-HSA-162458)
NCBP2 [nucleoplasm]
(R-HSA-51463)
0.527
2
UniProt:Q13901 C1D
1
C1D [nucleoplasm]
(R-HSA-6791515)
0.527
3
UniProt:O43719 HTATSF1
1
HTATSF1 [nucleoplasm]
(R-HSA-9770246)
0.527
2
UniProt:Q13868 EXOSC2
2
EXOSC2 [nucleoplasm]
(R-HSA-6791582)
EXOSC2 [cytosol]
(R-HSA-429999)
0.527
3
UniProt:Q9Y3B2 EXOSC1
2
EXOSC1 [nucleoplasm]
(R-HSA-6791578)
EXOSC1 [cytosol]
(R-HSA-429841)
0.527
2
UniProt:Q02809 PLOD1
1
PLOD1 [endoplasmic reticulum membrane]
(R-HSA-1981109)
0.527
3
UniProt:Q96B26 EXOSC8
2
EXOSC8 [nucleoplasm]
(R-HSA-6791571)
EXOSC8 [cytosol]
(R-HSA-429912)
0.527
2
UniProt:Q9BWU0 NADAP
0.527
2
UniProt:P09234 SNRPC
1
SNRPC [nucleoplasm]
(R-HSA-8865876)
0.527
2
UniProt:P31946 YWHAB
1
YWHAB [cytosol]
(R-HSA-48888)
0.483
2
UniProt:P62258 YWHAE
1
YWHAE [cytosol]
(R-HSA-194368)
0.483
2
UniProt:P61981 YWHAG
1
YWHAG [cytosol]
(R-HSA-380312)
0.483
2
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