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UPF3AS-2 [cytosol]
Stable Identifier
R-HSA-975930
Type
Genes and Transcripts [EntityWithAccessionedSequence]
Species
Homo sapiens
Compartment
cytosol
Synonyms
UPF3A isoform 2, Regulator of nonsense transcripts 3A, REN3A_HUMAN
Locations in the PathwayBrowser
Expand all
Metabolism of RNA (Homo sapiens)
Nonsense-Mediated Decay (NMD) (Homo sapiens)
Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC) (Homo sapiens)
SMG6 hydrolyzes mRNA with premature termination codon (Homo sapiens)
Phosphorylated UPF1:SMG5:SMG7:SMG6:PP2A:Translated mRNP [cytosol] (Homo sapiens)
UPF3AS-2 [cytosol] (Homo sapiens)
p-4S-UPF1 recruits SMG5, SMG7, SMG6, PNRC2, DCP1A, and PP2A (Homo sapiens)
Phosphorylated UPF1:SMG5:SMG7:SMG6:PP2A:Translated mRNP [cytosol] (Homo sapiens)
UPF3AS-2 [cytosol] (Homo sapiens)
External Reference Information
External Reference
UniProt:Q9H1J1-2 UPF3A
Gene Names
UPF3A, RENT3A, UPF3
Other Identifiers
11743078_a_at
11752883_s_at
11752884_x_at
11756131_a_at
11756340_x_at
16777022
17121734
206958_PM_s_at
206958_s_at
206959_PM_s_at
206959_s_at
214323_PM_s_at
214323_s_at
3217749
3503225
3503226
3503228
3503231
3503232
3503236
3503238
3503241
3503244
3503245
3503246
3503247
3503248
3503251
3503252
3503253
3503254
3509396
3747372
3747373
3747374
3747378
3747379
3747380
3749186
3749188
3749189
3749190
3749191
3749192
39131_at
65110
7970370
8180301
8180302
A_23_P99473
A_24_P81968
GE82743
GO:0000184
GO:0001701
GO:0003676
GO:0003677
GO:0003723
GO:0003729
GO:0005515
GO:0005634
GO:0005654
GO:0005730
GO:0005737
GO:0005829
GO:0007283
GO:0016071
GO:0022414
GO:0035145
GO:0042162
GO:0043005
GO:0043226
GO:0043231
GO:0045727
GO:0048856
GO:0051028
GO:1905746
GO:2000623
HMNXSV003018700
HMNXSV003023866
Hs.274412.2.A1_3p_a_at
ILMN_1671742
ILMN_1705515
PH_hs_0030026
TC13000436.hg
TC17001177.hg
g12711675_3p_a_at
Participates
as a component of
Phosphorylated UPF1:SMG5:SMG7:SMG6:PP2A:Translated mRNP [cytosol] (Homo sapiens)
Inferred To
Ghost homologue of UPF3AS-2 [cytosol]
(Bos taurus)
Ghost homologue of UPF3AS-2 [cytosol]
(Gallus gallus)
Ghost homologue of UPF3AS-2 [cytosol]
(Plasmodium falciparum)
upf3 [cytosol]
(Schizosaccharomyces pombe)
UPF3 [cytosol]
(Saccharomyces cerevisiae)
Upf3 [cytosol]
(Drosophila melanogaster)
UPF3A [cytosol]
(Canis familiaris)
UPF3A [cytosol]
(Dictyostelium discoideum)
UPF3A [cytosol]
(Sus scrofa)
smg-4 [cytosol]
(Caenorhabditis elegans)
Upf3a [cytosol]
(Mus musculus)
Upf3a [cytosol]
(Rattus norvegicus)
upf3a [cytosol]
(Danio rerio)
upf3a [cytosol]
(Xenopus tropicalis)
Cross References
RefSeq
NP_075387.1
,
NP_542418.1
OpenTargets
ENSG00000169062
HPA
ENSG00000169062-UPF3A
GeneCards
Q9H1J1
Ensembl
ENST00000375299
,
ENSP00000329592
,
ENSP00000364448
,
ENST00000351487
,
ENSG00000169062
PRO
Q9H1J1
Pharos - Targets
Q9H1J1
PDB
7QG6
,
2L08
Interactors (3)
Accession
#Entities
Entities
Confidence Score
Evidence (IntAct)
UniProt:Q92900 UPF1
2
UPF1 [cytosol]
(R-HSA-927734)
p-4S-UPF1 [cytosol]
(R-HSA-927856)
0.564
4
UniProt:Q9UBU9 NXF1
2
NXF1 [cytosol]
(R-HSA-156481)
NXF1 [nucleoplasm]
(R-HSA-111690)
0.527
2
UniProt:Q86V81 ALYREF
2
ALYREF [nucleoplasm]
(R-HSA-156649)
ALYREF [cytosol]
(R-HSA-158482)
0.527
2
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