Reactome | Formation of the Spliceosomal Bact complex

Formation of the Spliceosomal Bact complex

Stable Identifier

R-HSA-9770145

Type

Reaction [uncertain]

Species

Homo sapiens

Compartment

nucleoplasm

ReviewStatus

5/5

Locations in the PathwayBrowser

Expand all

General

SBML | | PDF

SVG | | PPTX | SBGN

Formation of the Spliceosomal Bact complex

Click the image above or here to open this reaction in the Pathway Browser
The layout of this reaction may differ from that in the pathway view due to the constraints in pathway layout

Activation of the Spliceosomal B complex to form the Spliceosomal Bact complex is believed to occur in several complex steps. SNRNP200 (homolog of yeast Brr2) of the U5 snRNP uses ATP to dissociate the U4 snRNP from the spliceosome. This renders U6 snRNA free to form additional interactions with U2 snRNA and fold its internal stem loop to create the active site (Laggerbauer et al. 1998, Lamond et al. 1988, Bessonov et al. 2010, Agafonov et al. 2011, Fica et al. 2013, Galej et al. 2016, Haselbach et al. 2018, Zhang et al. 2018, Kastner et al. 2019). In this active site four phosphate groups of the U6 snRNA cooridinate the two magnesium ions that catalyze both transesterification reactions of pre-mRNA splicing..The PRP19-CDC5L complex (Ajuh et al. 2000, also called the NTC complex) and the PRP19-CDC5L related complex (also called the NTR complex) are recruited during this transition and stabilize the active site (Bessonov et al. 2010, Agafonov et al. 2011, Haselbach et al. 2018, Zhang et al. 2018, Kastner et al. 2019). Splicing does not yet occur because the SF3B1 subunit of the U2 snRNP blocks the branch point and SF3A2 and RNF113A protect the 5' splice site, preventing the intron branch point from reacting with the 5' splice site (Gozani et al. 1996, Gozani et al. 1998, Haselbach et al. 2018, Zhang et al. 2018, Tholen et al. 2022). SNRNP200 and the RES complex retain the SF3B subcomplex in the spliceosome (Haselbach et al. 2018, Zhang et al. 2018). CWC22 recruits EIF4A3, which will form the exon junction complex (EJC) (Busetto et al. 2020) . The components of the Spliceosomal Bact complex have been ascertained using proteomic and structural methods (Bessonov et al. 2010, Agafonov et al. 2011, Haselbach et al. 2018, Zhang et al. 2018, Kastner et al. 2019, Townsend et al. 2020).

Literature References

PubMed ID	Title	Journal	Year
20980672	Characterization of purified human Bact spliceosomal complexes reveals compositional and morphological changes during spliceosome activation and first step catalysis Sander, B, Will, CL, Lührmann, R, Anokhina, M, Golas, MM, Krasauskas, A, Bessonov, S, Stark, H, Urlaub, H	RNA	2010
29361316	Structure and Conformational Dynamics of the Human Spliceosomal B^act Complex Komarov, I, Lührmann, R, Graf, B, Dybkov, O, Agafonov, DE, Haselbach, D, Stark, H, Urlaub, H, Kastner, B, Hartmuth, K	Cell	2018
33243851	Mechanism of protein-guided folding of the active site U2/U6 RNA during spliceosome activation Bertram, K, Will, CL, Lührmann, R, Leelaram, MN, Dybkov, O, Agafonov, DE, Stark, H, Urlaub, H, Townsend, C, Kastner, B	Science	2020
34822310	Structural basis of branch site recognition by the human spliceosome Weis, F, Tholen, J, Galej, WP, Razew, M	Science	2022
8566756	Evidence that sequence-independent binding of highly conserved U2 snRNP proteins upstream of the branch site is required for assembly of spliceosomal complex A Reed, R, Feld, R, Gozani, O	Genes Dev	1996
32329775	Structural and functional insights into CWC27/CWC22 heterodimer linking the exon junction complex to spliceosomes Paternina, JA, Bensaude, O, Hocq, R, Marquenet, E, Hennion, M, Basquin, J, Le Hir, H, Conti, E, Namane, A, Barbosa, I, Busetto, V	Nucleic Acids Res	2020
9671485	A potential role for U2AF-SAP 155 interactions in recruiting U2 snRNP to the branch site Reed, R, Potashkin, J, Gozani, O	Mol Cell Biol	1998
11101529	Functional analysis of the human CDC5L complex and identification of its components by mass spectrometry Lamond, AI, Kuster, B, Mann, M, Zomerdijk, JC, Panov, K, Ajuh, P	EMBO J.	2000
21536652	Semiquantitative proteomic analysis of the human spliceosome via a novel two-dimensional gel electrophoresis method Will, CL, Lührmann, R, Deckert, J, Odenwälder, P, Agafonov, DE, Bessonov, S, Urlaub, H, Wolf, E	Mol Cell Biol	2011
24196718	RNA catalyses nuclear pre-mRNA splicing Lu, J, Li, NS, Novak, T, Staley, JP, Dai, Q, Koodathingal, P, Fica, SM, Piccirilli, JA, Tuttle, N	Nature	2013
29360106	Structure of the human activated spliceosome in three conformational states Shi, Y, Li, L, Yan, C, Zhang, X, Lei, J, Zhan, X	Cell Res	2018
2963332	Spliceosome assembly involves the binding and release of U4 small nuclear ribonucleoprotein Lamond, AI, Grabowski, PJ, Sharp, PA, Konarska, MM	Proc. Natl. Acad. Sci. U.S.A.	1988
27459055	Cryo-EM structure of the spliceosome immediately after branching Wilkinson, ME, Fica, SM, Nagai, K, Galej, WP, Newman, AJ, Oubridge, C	Nature	2016
30765414	Structural Insights into Nuclear pre-mRNA Splicing in Higher Eukaryotes Will, CL, Lührmann, R, Stark, H, Kastner, B	Cold Spring Harb Perspect Biol	2019
9539711	The human U5-200kD DEXH-box protein unwinds U4/U6 RNA duplices in vitro Achsel, T, Lührmann, R, Laggerbauer, B	Proc Natl Acad Sci U S A	1998