Reactome | Gpc6 [Golgi lumen]

Gpc6 [Golgi lumen]

Stable Identifier

R-MMU-2076324

Type

Protein [EntityWithAccessionedSequence]

Species

Mus musculus

Compartment

Golgi lumen

Synonyms

HS(2)-GPC6, Q9R087

Locations in the PathwayBrowser

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External Reference Information

External Reference

UniProt:Q9R087 Gpc6

Gene Names

Gpc6

Chain

signal peptide:1-23, chain:24-530, chain:24-, propeptide:531-555

Reference Genes

BioGPS Gene:23888 Gpc6

ENSEMBL:ENSMUSG00000058571 Gpc6

KEGG Gene (Mus musculus):23888 Gpc6

Monarch:23888 Gpc6

NCBI Gene:23888 Gpc6

UCSC:Q9R087 Gpc6

Reference Transcript

RefSeq:NM_011821.3 Gpc6

Other Identifiers

10416974

1419688_at

1437417_s_at

17302656

23888

4409110

4444823

4534591

4547171

4576974

4671338

4733194

4760251

4831755

4913951

4921422

5255420

5381711

5476422

A_51_P372112

A_52_P224829

A_55_P2384593

GO:0005576

GO:0005615

GO:0005622

GO:0005737

GO:0005794

GO:0005796

GO:0005886

GO:0005887

GO:0007155

GO:0009966

GO:0009986

GO:0016020

GO:0016477

GO:0023052

GO:0030312

GO:0031012

GO:0031225

GO:0034330

GO:0043226

GO:0045202

GO:0046658

GO:0048856

GO:0048870

GO:0062023

GO:0098696

GO:0098978

GO:0099560

GO:1905475

GO:1905606

ILMN_2764770

mMC008736

Participates

as a member of

HS(2)-PGs [Golgi lumen] (Mus musculus)

Other forms of this molecule

Gpc6 [lysosomal lumen]

Gpc6 [Golgi lumen]

HS(2)-Gpc6 [Golgi lumen]

HS(1)-Gpc6 [Golgi lumen]

Gpc6 [Golgi lumen]

Gpc6 [plasma membrane]

Gpc6 [Golgi lumen]

Inferred From

HS(2)-GPC6 [Golgi lumen] (Homo sapiens)

Modified Residues

Name

O-xylosyl-L-serine (beta-D-GlcA-(1->4)-alpha-D-GlcNS-(1->4)-beta-D-IdoA-(1->4)-alpha-D-GlcNS-(1->4)-beta-D-GlcA-(1->3)-beta-D-Gal-(1->3)-beta-D-Gal-(1->4)-beta-D-Xyl-yl group) at unknown position

Modification

beta-D-GlcA-(1->4)-alpha-D-GlcNS-(1->4)-beta-D-IdoA-(1->4)-alpha-D-GlcNS-(1->4)-beta-D-GlcA-(1->3)-beta-D-Gal-(1->3)-beta-D-Gal-(1->4)-beta-D-Xyl-yl group

PsiMod Name

O-xylosyl-L-serine

PsiMod Definition

A protein modification that effectively converts an L-serine residue to O3-xylosylserine.

Cross References

RefSeq

NP_035951.1

Ensembl

ENSMUSP00000085835, ENSMUSP00000077893, ENSMUSG00000058571, ENSMUST00000078849, ENSMUST00000088483

PRO

Q9R087

MGI

1346322