Reactome | Col4a6 [extracellular region]

Col4a6 [extracellular region]

Stable Identifier

R-MMU-2468244

Type

Protein [EntityWithAccessionedSequence]

Species

Mus musculus

Compartment

extracellular region

Synonyms

3x4Hyp-3Hyp-GalHyl-COL4A6(23-?), B1AVK5

Locations in the PathwayBrowser

Expand all

Extracellular matrix organization (Mus musculus)

- Degradation of the extracellular matrix (Mus musculus)
  - Collagen degradation (Mus musculus)
    - Collagen type IV degradation by MMP2,3,4,9,10,12 (Mus musculus)
      - Cleaved collagen type IV networks [extracellular region] (Mus musculus)
        
        Cleaved collagen type IV alpha1.alpha2.alpha5.alpha6 network [extracellular region] (Mus musculus)
        
        Cleaved collagen type IV alpha1.alpha2.alpha5.alpha6 tropocollagens [extracellular region] (Mus musculus)
        
        Cleaved tropocollagen alpha-5(IV).alpha-5(IV).alpha-6(IV) [extracellular region] (Mus musculus)
        
        Col4a6 [extracellular region] (Mus musculus)
    - Gelatin degradation by MMP1, 2, 3, 7, 8, 9, 12, 13 (Mus musculus)
      - Cleaved collagen fibrils [extracellular region] (Mus musculus)
        
        Cleaved collagen type IV networks [extracellular region] (Mus musculus)
        
        Cleaved collagen type IV alpha1.alpha2.alpha5.alpha6 network [extracellular region] (Mus musculus)
        
        Cleaved collagen type IV alpha1.alpha2.alpha5.alpha6 tropocollagens [extracellular region] (Mus musculus)
        
        Cleaved tropocollagen alpha-5(IV).alpha-5(IV).alpha-6(IV) [extracellular region] (Mus musculus)
        
        Col4a6 [extracellular region] (Mus musculus)

External Reference Information

External Reference

UniProt:B1AVK5

Gene Names

Col4a6

Reference Genes

BioGPS Gene:94216 Col4a6

ENSEMBL:ENSMUSG00000031273

KEGG:mmu:94216 Col4a6

Monarch:94216 Col4a6

NCBI Gene:94216 Col4a6

UCSC:B1AVK5 Col4a6

Reference Transcript

RefSeq:NM_053185.2 Col4a6

Other Identifiers

10607012

1421006_at

1421007_at

163892_at

17544969

4363868

4380855

4408309

4410690

4414994

4425338

4426088

4428848

4430612

4440096

4443115

4461671

4467277

4491203

4497326

4525146

4526958

4527013

4542474

4544272

4566134

4582595

4588023

4595192

4612871

4615995

4633222

4651704

4670899

4672656

4677099

4698008

4705172

4714088

4750927

4773626

4776130

4787792

4789589

4871333

4876642

4881839

4882844

4889136

4929174

4998131

5001542

5010565

5025409

5035038

5063148

5079614

5088231

5097323

5119851

5128073

5144976

5157105

5194580

5198294

5287676

5322624

5339934

5362819

5392927

5405720

5495081

5509202

5547251

5565394

5569344

94216

A_51_P109326

A_52_P516409

GE42059

GO:0005198

GO:0005201

GO:0005581

GO:0005587

GO:0005604

GO:0005615

GO:0016020

GO:0030020

GO:0030198

GO:0030312

GO:0031012

GO:0038063

GO:0062023

GO:0071230

ILMN_1231256

ILMN_1235027

ILMN_1252184

ILMN_1254059

mMC011329

mMR026539

Participates

as a component of

Cleaved tropocollagen alpha-5(IV).alpha-5(IV).alpha-6(IV) [extracellular region] (Mus musculus)

Other forms of this molecule

Col4a6 [endoplasmic reticulum lumen]

Col4a6 [extracellular region]

Col4a6 [endoplasmic reticulum lumen]

Inferred From

Cleaved collagen alpha-6(IV) chains [extracellular region] (Homo sapiens)

3x4Hyp-3Hyp-GalHyl-COL4A6(23-?) [extracellular region] (Homo sapiens)

Modified Residues

Name

(2S,4R)-4-hydroxyproline at unknown position

PsiMod Name

(2S,4R)-4-hydroxyproline

PsiMod Definition

A protein modification that effectively converts an L-proline residue to 4-hydroxy-L-proline

Name

(2S,4R)-4-hydroxyproline at unknown position

PsiMod Name

(2S,4R)-4-hydroxyproline

PsiMod Definition

A protein modification that effectively converts an L-proline residue to 4-hydroxy-L-proline

Name

(2S,4R)-4-hydroxyproline at unknown position

PsiMod Name

(2S,4R)-4-hydroxyproline

PsiMod Definition

A protein modification that effectively converts an L-proline residue to 4-hydroxy-L-proline

Name

(2S,3S)-3-hydroxyproline at unknown position

PsiMod Name

(2S,3S)-3-hydroxyproline

PsiMod Definition

A protein modification that effectively converts an L-proline residue to 3-hydroxy-L-proline.

Name

O5-galactosyl-L-hydroxylysine at unknown position

PsiMod Name

O5-galactosyl-L-hydroxylysine

PsiMod Definition

A protein modification that effectively converts an L-lysine residue to O5-galactosyl-L-hydroxylysine.

Cross References

RefSeq

NP_444415.2

ENSEMBL

ENSMUSP00000098765, ENSMUST00000101205

MGI

2152695