Toggle navigation
About
What is Reactome ?
News
Team
Scientific Advisory Board
Funding
Editorial Calendar
Release Calendar
Statistics
Our Logo
License Agreement
Privacy Notice
Disclaimer
Digital Preservation
Contact us
Content
Table of Contents
DOIs
Data Schema
Reactome Research Spotlight
ORCID Integration Project
COVID-19 Disease Pathways
Docs
Userguide
Pathway Browser
How do I search ?
Details Panel
Analysis Tools
Analysis Data
Analysis Gene Expression
Species Comparison
Tissue Distribution
Diseases
Cytomics
Review Status of Reactome Events
ReactomeFIViz
Developer's Zone
Graph Database
Analysis Service
Content Service
Pathways Overview
Pathway Diagrams
Icon Info
EHLD Specs & Guidelines
Icon Library Guidelines
Data Model
Curator Guide
Release Documentation
Computationally inferred events
FAQ
Linking to Us
Citing us
Tools
Pathway Browser
Analyse gene list
Analyse gene expression
Species Comparison
Tissue Distribution
Analysis Service
Content Service
ReactomeFIViz
Advanced Data Search
Site Search
Community
Contribute Pathway Knowledge
Icon Library
Outreach
Events
Publications
Partners
Contributors
Resources Guide
Download
About
What is Reactome ?
News
Team
Scientific Advisory Board
Funding
Editorial Calendar
Release Calendar
Statistics
Our Logo
License Agreement
Privacy Notice
Disclaimer
Digital Preservation
Contact us
Content
Table of Contents
DOIs
Data Schema
Reactome Research Spotlight
ORCID Integration Project
COVID-19 Disease Pathways
Docs
Userguide
Pathway Browser
How do I search ?
Details Panel
Analysis Tools
Analysis Data
Analysis Gene Expression
Species Comparison
Tissue Distribution
Diseases
Cytomics
Review Status of Reactome Events
ReactomeFIViz
Developer's Zone
Graph Database
Analysis Service
Content Service
Pathways Overview
Pathway Diagrams
Icon Info
EHLD Specs & Guidelines
Icon Library Guidelines
Data Model
Curator Guide
Release Documentation
Computationally inferred events
FAQ
Linking to Us
Citing us
Tools
Pathway Browser
Analyse gene list
Analyse gene expression
Species Comparison
Tissue Distribution
Analysis Service
Content Service
ReactomeFIViz
Advanced Data Search
Site Search
Community
Contribute Pathway Knowledge
Icon Library
Outreach
Events
Publications
Partners
Contributors
Resources Guide
Download
Search ...
Go!
HS(1)-Sdc1 [extracellular region]
Stable Identifier
R-MMU-2731145
Type
Protein [EntityWithAccessionedSequence]
Species
Mus musculus
Compartment
extracellular region
Synonyms
Sdc1, Syndecan-1, SDC1_MOUSE, Sdc1
External Reference Information
External Reference
UniProt:P18828 Sdc1
Gene Names
Sdc1, Synd-1, Synd1
Chain
signal peptide:1-22, chain:23-311
Reference Genes
BioGPS Gene:20969 Sdc1
ENSEMBL:ENSMUSG00000020592.16 Sdc1
KEGG Gene (Mus musculus):20969 Sdc1
Monarch:20969 Sdc1
NCBI Gene:20969 Sdc1
UCSC:P18828 Sdc1
Reference Transcript
RefSeq:NM_011519.2 Sdc1
Other Identifiers
10394471
1415943_at
1415944_at
1437279_x_at
1448158_at
17273948
20969
4319373
4385065
4705063
4791459
5037392
5047223
5143039
5202857
5214767
5299552
5328905
5403204
5597766
96033_at
A_52_P479269
A_65_P20200
GE1566980
GO:0001657
GO:0005515
GO:0005576
GO:0005794
GO:0005796
GO:0005886
GO:0006898
GO:0009636
GO:0009897
GO:0009986
GO:0010033
GO:0016020
GO:0016192
GO:0016477
GO:0022414
GO:0023052
GO:0030154
GO:0032991
GO:0038024
GO:0042542
GO:0042802
GO:0043226
GO:0048627
GO:0048856
GO:0048870
GO:0051384
GO:0051591
GO:0051592
GO:0055002
GO:0060009
GO:0060070
GO:1903543
GO:1903553
ILMN_1228718
ILMN_1232708
ILMN_2756943
ILMN_2927799
Msa.2710.0_s_at
mMC024727
mMR026289
z22532_at
Participates
as a member of
Syndecan-1 [extracellular region] (Mus musculus)
Other forms of this molecule
HS(2)-Sdc1 [extracellular region]
Sdc1 [plasma membrane]
Sdc1 [lysosomal lumen]
Sdc1 [lysosomal lumen]
HS(2)-Sdc1 [Golgi lumen]
HS(1)-Sdc1 [Golgi lumen]
Sdc1 [Golgi lumen]
Sdc1 [Golgi lumen]
Sdc1 [Golgi lumen]
Sdc1 [plasma membrane]
Sdc1 [plasma membrane]
Sdc1 [plasma membrane]
Sdc1 [plasma membrane]
Sdc1 [plasma membrane]
Sdc1 [plasma membrane]
Sdc1 [Golgi lumen]
Sdc1 [Golgi lumen]
Sdc1 [Golgi lumen]
Sdc1 [Golgi lumen]
Sdc1 [Golgi lumen]
Sdc1 [Golgi lumen]
Sdc1 [Golgi lumen]
Sdc1 [Golgi lumen]
Sdc1 [Golgi lumen]
Sdc1 [Golgi lumen]
Sdc1 [Golgi lumen]
Sdc1 [Golgi lumen]
Sdc1 [Golgi lumen]
Modified Residues
Name
O-xylosyl-L-serine (beta-D-GlcA-(1->4)-alpha-D-GlcNS-(1->4)-beta-D-GlcA-(1->4)-alpha-D-GlcNS-(1->4)-beta-D-GlcA-(1->3)-beta-D-Gal-(1->3)-beta-D-Gal-(1->4)-beta-D-Xyl-yl group) at unknown position
Modification
beta-D-GlcA-(1->4)-alpha-D-GlcNS-(1->4)-beta-D-GlcA-(1->4)-alpha-D-GlcNS-(1->4)-beta-D-GlcA-(1->3)-beta-D-Gal-(1->3)-beta-D-Gal-(1->4)-beta-D-Xyl-yl group
PsiMod Name
O-xylosyl-L-serine
PsiMod Definition
A protein modification that effectively converts an L-serine residue to O3-xylosylserine.
Cross References
RefSeq
NP_035649.1
Ensembl
ENSMUSP00000020911
,
ENSMUSG00000020592
,
ENSMUST00000020911
PRO
P18828
MGI
1349162
Interactors (1)
Accession
#Entities
Entities
Confidence Score
Evidence (IntAct)
UniProt:Q15113 PCOLCE
1
PCOLCE [extracellular region]
(R-HSA-2002444)
0.499
4
© 2024
Reactome
Cite Us!
Cite Us!
Cite Us!
Warning!
Unable to extract citation. Please try again later.
Download As:
BibTeX
RIS
Text