Reactome | Smarcd3 [nucleoplasm]

Smarcd3 [nucleoplasm]

Stable Identifier

R-MMU-400141

Type

Protein [EntityWithAccessionedSequence]

Species

Mus musculus

Compartment

nucleoplasm

Synonyms

SMARCD3, Q6P9Z1

Locations in the PathwayBrowser

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Cellular responses to stimuli (Mus musculus)

- Cellular responses to stress (Mus musculus)
  - Cellular response to chemical stress (Mus musculus)
    - Cytoprotection by HMOX1 (Mus musculus)
      - Fatty acid ligands activate PPARA (Mus musculus)
        
        Coactivators of PPARalpha [nucleoplasm] (Mus musculus)
        
        Smarcd3 [nucleoplasm] (Mus musculus)
        
        PPARA:RXRA Coactivator complex [nucleoplasm] (Mus musculus)
        
        Coactivators of PPARalpha [nucleoplasm] (Mus musculus)
        
        Smarcd3 [nucleoplasm] (Mus musculus)

Gene expression (Transcription) (Mus musculus)

- RNA Polymerase II Transcription (Mus musculus)
  - Generic Transcription Pathway (Mus musculus)
    - Transcriptional regulation by RUNX1 (Mus musculus)
      - RUNX1 interacts with co-factors whose precise effect on RUNX1 targets is not known (Mus musculus)
        
        RUNX1 binds the SWI/SNF complex (Mus musculus)
        
        RUNX1:CBFB:SWI/SNF [nucleoplasm] (Mus musculus)
        
        SWI/SNF chromatin remodelling complex [nucleoplasm] (Mus musculus)
        
        SWI/SNF additional components [nucleoplasm] (Mus musculus)
        
        Smarcd3 [nucleoplasm] (Mus musculus)
        
        SWI/SNF chromatin remodelling complex [nucleoplasm] (Mus musculus)
        
        SWI/SNF additional components [nucleoplasm] (Mus musculus)
        
        Smarcd3 [nucleoplasm] (Mus musculus)

External Reference Information

External Reference

UniProt:Q6P9Z1

Gene Names

Smarcd3

Reference Genes

BioGPS Gene:66993 Smarcd3

ENSEMBL:ENSMUSG00000028949

KEGG Gene (Mus musculus):66993 Smarcd3

Monarch:66993 Smarcd3

NCBI Gene:66993 Smarcd3

UCSC:Q6P9Z1 Smarcd3

Reference Transcript

RefSeq:NM_025891.3 Smarcd3

Other Identifiers

10528664

108488_at

108911_at

1418467_at

17446269

4468214

4469189

4471279

4527519

4574255

4625927

4728232

4787757

5061344

5207550

5243704

5262696

5322114

5453897

5571697

5616057

66993

GE42858

GO:0000228

GO:0000278

GO:0000785

GO:0001228

GO:0002052

GO:0003007

GO:0003139

GO:0003219

GO:0003407

GO:0003674

GO:0003682

GO:0003700

GO:0005102

GO:0005515

GO:0005575

GO:0005622

GO:0005634

GO:0005654

GO:0005694

GO:0005737

GO:0006325

GO:0006337

GO:0006338

GO:0006357

GO:0007049

GO:0007399

GO:0008134

GO:0008150

GO:0008283

GO:0009058

GO:0010971

GO:0016514

GO:0016922

GO:0030154

GO:0030374

GO:0032991

GO:0034641

GO:0035257

GO:0042692

GO:0043226

GO:0043393

GO:0045893

GO:0045944

GO:0048646

GO:0048856

GO:0051152

GO:0051276

GO:0071564

GO:0071565

ILMN_1248397

mMC022989

Participates

as a candidate of

SWI/SNF additional components [nucleoplasm] (Mus musculus)

as a member of

Coactivators of PPARalpha [nucleoplasm] (Mus musculus)

Inferred From

SMARCD3 [nucleoplasm] (Homo sapiens)

Cross References

RefSeq

NP_080167.3

Ensembl

ENSMUST00000030791, ENSMUSP00000030791, ENSMUSG00000028949

PRO

Q6P9Z1

MGI

1914243

Interactors (4)

Accession	#Entities	Entities	Confidence Score	Evidence (IntAct)
UniProt:P10085 Myod1	2	Myod1 [nucleoplasm] (R-MMU-445441) MYOD1_MOUSE [nucleoplasm] (R-MMU-448840)	0.655	6
UniProt:P31266 Rbpj	2	Rbpj [nucleoplasm] (R-MMU-3008668) Rbpj [nucleoplasm] (R-MMU-189590)	0.591	3
UniProt:Q3TKT4	1	Smarca4 [nucleoplasm] (R-MMU-201686)	0.576	3
UniProt:Q01705 Notch1	24	Glc,GlcNAc-Fuc-Pre-Notch1 [Golgi membrane] (R-MMU-2023154) p-NICD1 [nucleoplasm] (R-MMU-2064842) Notch1 [Golgi membrane] (R-MMU-1911503) Notch1 [Golgi membrane] (R-MMU-1911511) Fringe-modified NECD1 [plasma membrane] (R-MMU-2053928) nicd1 [nucleoplasm] (R-MMU-189582) Pre-Notch1 [endoplasmic reticulum membrane] (R-MMU-1984030) Fuc-Pre-Notch1 [endoplasmic reticulum membrane] (R-MMU-1985704) Glc,Fuc-Pre-Notch1 [Golgi membrane] (R-MMU-2023160) Glc,Fuc-Pre-Notch1 [endoplasmic reticulum membrane] (R-MMU-2023167) Notch1 [Golgi membrane] (R-MMU-1472872) Notch1 [Golgi membrane] (R-MMU-1983679) Notch1 [Golgi membrane] (R-MMU-157092) NTM [plasma membrane] (R-MMU-206117) NTM' [extracellular region] (R-MMU-206219) Notch1 Extracellular Domain (NECD1) [extracellular region] (R-MMU-2032285) NdeltaE [plasma membrane] (R-MMU-2063913) Notch1 [plasma membrane] (R-MMU-1911512) Notch1 [plasma membrane] (R-MMU-157239) Notch1 [extracellular region] (R-MMU-1983670) Notch1 [nucleoplasm] (R-MMU-157939) NEXT1 [plasma membrane] (R-MMU-205889) N1' [plasma membrane] (R-MMU-206107) NICD1 [cytosol] (R-MMU-205738)	0.499	2