Reactome | Smarcd3 [nucleoplasm]

Smarcd3 [nucleoplasm]

Stable Identifier

R-MMU-9727442

Type

Protein [EntityWithAccessionedSequence]

Species

Mus musculus

Compartment

nucleoplasm

Synonyms

SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, SMRD3_MOUSE

Locations in the PathwayBrowser

Expand all

Cellular responses to stimuli (Mus musculus)

- Cellular responses to stress (Mus musculus)
  - Cellular response to chemical stress (Mus musculus)
    - Cytoprotection by HMOX1 (Mus musculus)
      - Fatty acid ligands activate PPARA (Mus musculus)
        
        Coactivators of PPARalpha [nucleoplasm] (Mus musculus)
        
        Smarcd3 [nucleoplasm] (Mus musculus)
        
        PPARA:RXRA Coactivator complex [nucleoplasm] (Mus musculus)
        
        Coactivators of PPARalpha [nucleoplasm] (Mus musculus)
        
        Smarcd3 [nucleoplasm] (Mus musculus)

Gene expression (Transcription) (Mus musculus)

- RNA Polymerase II Transcription (Mus musculus)
  - Generic Transcription Pathway (Mus musculus)
    - Transcriptional regulation by RUNX1 (Mus musculus)
      - RUNX1 interacts with co-factors whose precise effect on RUNX1 targets is not known (Mus musculus)
        
        RUNX1 binds the SWI/SNF complex (Mus musculus)
        
        RUNX1:CBFB:SWI/SNF [nucleoplasm] (Mus musculus)
        
        SWI/SNF chromatin remodelling complex [nucleoplasm] (Mus musculus)
        
        SWI/SNF additional components [nucleoplasm] (Mus musculus)
        
        Smarcd3 [nucleoplasm] (Mus musculus)
        
        SWI/SNF chromatin remodelling complex [nucleoplasm] (Mus musculus)
        
        SWI/SNF additional components [nucleoplasm] (Mus musculus)
        
        Smarcd3 [nucleoplasm] (Mus musculus)

External Reference Information

External Reference

UniProt:Q6P9Z1 Smarcd3

Gene Names

Smarcd3, Baf60c

Chain

initiator methionine:, chain:2-483

Reference Genes

BioGPS Gene:66993 Smarcd3

KEGG:mmu:66993 Smarcd3

Monarch:66993 Smarcd3

NCBI Gene:66993 Smarcd3

UCSC:Q6P9Z1 Smarcd3

Reference Transcript

RefSeq:NM_025891.3 Smarcd3

Other Identifiers

10528664

108488_at

108911_at

1418467_at

17446269

4391281

4468214

4469189

4471279

4527519

4574255

4611236

4622976

4625927

4728232

4743785

4780721

4781132

4787757

5061344

5137615

5149862

5160637

5207550

5243704

5262696

5283842

5320325

5322114

5374099

5453897

5497728

5518808

5571697

5616057

66993

A_52_P444192

A_55_P2483256

A_66_P119022

GE42858

GO:0000785

GO:0001221

GO:0002052

GO:0003007

GO:0003139

GO:0003219

GO:0003407

GO:0003682

GO:0005102

GO:0005515

GO:0005634

GO:0005654

GO:0006325

GO:0006337

GO:0006338

GO:0006355

GO:0006357

GO:0007399

GO:0010971

GO:0016514

GO:0016922

GO:0030071

GO:0030154

GO:0035060

GO:0042692

GO:0043226

GO:0045582

GO:0045597

GO:0045663

GO:0045893

GO:0048856

GO:0051152

GO:0070316

GO:0071564

GO:0071565

GO:0140297

GO:2000045

GO:2000781

GO:2000819

ILMN_1248397

mMC022989

Participates

as a member of

as a candidate of

Inferred From

SMARCD3 [nucleoplasm] (Homo sapiens)

Cross References

RefSeq

NP_080167.3

ENSEMBL

ENSMUSP00000030791, ENSMUSG00000028949, ENSMUST00000030791

PRO

Q6P9Z1

GlyGen

Q6P9Z1

MGI

1914243

Interactors (4)

Accession	#Entities	Entities	Confidence Score	Evidence (IntAct)
UniProt:P10085 Myod1	2	Myod1 [nucleoplasm] (R-MMU-448840) Myod1 [nucleoplasm] (R-MMU-445441)	0.655	6
UniProt:P31266 Rbpj	2	Rbpj [nucleoplasm] (R-MMU-189590) Rbpj [nucleoplasm] (R-MMU-3008668)	0.591	3
UniProt:Q3TKT4 Smarca4	2	Smarca4 [nucleoplasm] (R-MMU-201686) Smarca4 [nucleoplasm] (R-MMU-9727480)	0.576	3
UniProt:Q01705 Notch1	20	Notch1 [endosome membrane] (R-MMU-9793910) p-NICD1 [nucleoplasm] (R-MMU-2064842) NICD1 [cytosol] (R-MMU-205738) N1' [plasma membrane] (R-MMU-206107) NTM' [extracellular region] (R-MMU-206219) NEXT1 [plasma membrane] (R-MMU-205889) NdeltaE [plasma membrane] (R-MMU-2063913) Fringe-modified NECD1 [plasma membrane] (R-MMU-2053928) Glc,GlcNAc-Fuc-Pre-Notch1 [Golgi membrane] (R-MMU-2023154) Notch1 [Golgi membrane] (R-MMU-1911503) Notch1 [Golgi membrane] (R-MMU-1911511) NTM [plasma membrane] (R-MMU-206117) Notch1 Extracellular Domain (NECD1) [extracellular region] (R-MMU-2032285) Glc,Fuc-Pre-Notch1 [Golgi membrane] (R-MMU-2023160) Glc,Fuc-Pre-Notch1 [endoplasmic reticulum membrane] (R-MMU-2023167) Fuc-Pre-Notch1 [endoplasmic reticulum membrane] (R-MMU-1985704) Notch1 [nucleoplasm] (R-MMU-157939) Notch1 [extracellular region] (R-MMU-1983670) Notch1 [plasma membrane] (R-MMU-157239) Notch1 [plasma membrane] (R-MMU-1911512)	0.499	2

Cite Us!