Reactome | Sdc2 [Golgi lumen]

Sdc2 [Golgi lumen]

Stable Identifier

R-RNO-2076607

Type

Protein [EntityWithAccessionedSequence]

Species

Rattus norvegicus

Compartment

Golgi lumen

Synonyms

HS(1)-SDC2, P34900

Locations in the PathwayBrowser

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External Reference Information

External Reference

UniProt:P34900 Sdc2

Gene Names

Sdc2, Hspg1, Synd2

Chain

signal peptide:1-18, chain:19-201

Reference Genes

BioGPS Gene:25615 Sdc2

KEGG:rno:25615 Sdc2

Monarch:25615 Sdc2

NCBI Gene:25615 Sdc2

UCSC:P34900 Sdc2

Reference Transcript

RefSeq:NM_013082.3 Sdc2

Participates

as a member of

HS(1)-PGs [Golgi lumen] (Rattus norvegicus)

Other forms of this molecule

Sdc2 [plasma membrane]

Sdc2 [endoplasmic reticulum lumen]

phospho-Sdc2 [endoplasmic reticulum lumen]

Sdc2 [Golgi lumen]

Sdc2 [lysosomal lumen]

phospho-Sdc2 [plasma membrane]

Syndecan-2 [plasma membrane]

Inferred From

HS(1)-SDC2 [Golgi lumen] (Homo sapiens)

Modified Residues

Name

O-xylosyl-L-serine (ChEBI:63652) at unknown position

Modification

beta-D-GlcA-(1->4)-alpha-D-GlcNS-(1->4)-beta-D-GlcA-(1->4)-alpha-D-GlcNS-(1->4)-beta-D-GlcA-(1->3)-beta-D-Gal-(1->3)-beta-D-Gal-(1->4)-beta-D-Xyl-yl group

PsiMod Name

O-xylosyl-L-serine

PsiMod Definition

A protein modification that effectively converts an L-serine residue to O3-xylosylserine.

Cross References

RefSeq

NP_037214.1

PRO

P34900

RGD

3649

GlyGen

P34900

Interactors (2)

Accession	#Entities	Entities	Confidence Score	Evidence (IntAct)
UniProt:P34901 Sdc4	20	Sdc4 [plasma membrane] (R-RNO-2076670) Sdc4 [plasma membrane] (R-RNO-2076633) Sdc4 [plasma membrane] (R-RNO-2076694) Sdc4 [plasma membrane] (R-RNO-2076653) Sdc4 [plasma membrane] (R-RNO-2076674) Sdc4 [plasma membrane] (R-RNO-2076635) Sdc4 [Golgi lumen] (R-RNO-2064195) Sdc4 [Golgi lumen] (R-RNO-2064249) Sdc4 [Golgi lumen] (R-RNO-2054111) Sdc4 [Golgi lumen] (R-RNO-2064100) Sdc4 [Golgi lumen] (R-RNO-2064067) Sdc4 [Golgi lumen] (R-RNO-2076418) Sdc4 [Golgi lumen] (R-RNO-2076407) Sdc4 [Golgi lumen] (R-RNO-2076411) Sdc4 [Golgi lumen] (R-RNO-2076434) Sdc4 [Golgi lumen] (R-RNO-2076613) Sdc4 [Golgi lumen] (R-RNO-2076460) Sdc4 [Golgi lumen] (R-RNO-2076446) Sdc4 [Golgi lumen] (R-RNO-2076394) Sdc4 [Golgi lumen] (R-RNO-2076374)	0.602	4
UniProt:P33671	20	Sdc3 [plasma membrane] (R-RNO-2076685) Sdc3 [plasma membrane] (R-RNO-2076640) Sdc3 [plasma membrane] (R-RNO-2076692) Sdc3 [plasma membrane] (R-RNO-2076671) Sdc3 [plasma membrane] (R-RNO-2076657) Sdc3 [plasma membrane] (R-RNO-2076625) Sdc3 [Golgi lumen] (R-RNO-2064072) Sdc3 [Golgi lumen] (R-RNO-2063983) Sdc3 [Golgi lumen] (R-RNO-2054110) Sdc3 [Golgi lumen] (R-RNO-2064042) Sdc3 [Golgi lumen] (R-RNO-2064123) Sdc3 [Golgi lumen] (R-RNO-2076338) Sdc3 [Golgi lumen] (R-RNO-2076473) Sdc3 [Golgi lumen] (R-RNO-2076365) Sdc3 [Golgi lumen] (R-RNO-2076388) Sdc3 [Golgi lumen] (R-RNO-2076427) Sdc3 [Golgi lumen] (R-RNO-2076389) Sdc3 [Golgi lumen] (R-RNO-2076487) Sdc3 [Golgi lumen] (R-RNO-2076516) Sdc3 [Golgi lumen] (R-RNO-2076462)	0.59	2

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