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Sdc2 [plasma membrane]
Stable Identifier
R-RNO-2076665
Type
Protein [EntityWithAccessionedSequence]
Species
Rattus norvegicus
Compartment
plasma membrane
Synonyms
HS(5)-SDC2, P34900
Locations in the PathwayBrowser
Expand all
Metabolism (Rattus norvegicus)
Metabolism of carbohydrates (Rattus norvegicus)
Glycosaminoglycan metabolism (Rattus norvegicus)
Heparan sulfate/heparin (HS-GAG) metabolism (Rattus norvegicus)
HS-GAG biosynthesis (Rattus norvegicus)
Some HSPGs are secreted to the plasma membrane (Rattus norvegicus)
HSPGs [plasma membrane] (Rattus norvegicus)
HS(5)-PGs [plasma membrane] (Rattus norvegicus)
Sdc2 [plasma membrane] (Rattus norvegicus)
Metabolism of vitamins and cofactors (Rattus norvegicus)
Metabolism of fat-soluble vitamins (Rattus norvegicus)
Retinoid metabolism and transport (Rattus norvegicus)
CR:atREs binds apoE and HSPG (Rattus norvegicus)
CR:atREs:HSPG:apoE [plasma membrane] (Rattus norvegicus)
HSPGs [plasma membrane] (Rattus norvegicus)
HS(5)-PGs [plasma membrane] (Rattus norvegicus)
Sdc2 [plasma membrane] (Rattus norvegicus)
HSPGs [plasma membrane] (Rattus norvegicus)
HS(5)-PGs [plasma membrane] (Rattus norvegicus)
Sdc2 [plasma membrane] (Rattus norvegicus)
LRPs transport extracellular CR:atREs:HSPG:apoE to cytosol (Rattus norvegicus)
CR:atREs:HSPG:apoE [early endosome] (Rattus norvegicus)
HSPGs [plasma membrane] (Rattus norvegicus)
HS(5)-PGs [plasma membrane] (Rattus norvegicus)
Sdc2 [plasma membrane] (Rattus norvegicus)
CR:atREs:HSPG:apoE [plasma membrane] (Rattus norvegicus)
HSPGs [plasma membrane] (Rattus norvegicus)
HS(5)-PGs [plasma membrane] (Rattus norvegicus)
Sdc2 [plasma membrane] (Rattus norvegicus)
Sensory Perception (Rattus norvegicus)
Visual phototransduction (Rattus norvegicus)
Retinoid metabolism and transport (Rattus norvegicus)
CR:atREs binds apoE and HSPG (Rattus norvegicus)
CR:atREs:HSPG:apoE [plasma membrane] (Rattus norvegicus)
HSPGs [plasma membrane] (Rattus norvegicus)
HS(5)-PGs [plasma membrane] (Rattus norvegicus)
Sdc2 [plasma membrane] (Rattus norvegicus)
HSPGs [plasma membrane] (Rattus norvegicus)
HS(5)-PGs [plasma membrane] (Rattus norvegicus)
Sdc2 [plasma membrane] (Rattus norvegicus)
LRPs transport extracellular CR:atREs:HSPG:apoE to cytosol (Rattus norvegicus)
CR:atREs:HSPG:apoE [early endosome] (Rattus norvegicus)
HSPGs [plasma membrane] (Rattus norvegicus)
HS(5)-PGs [plasma membrane] (Rattus norvegicus)
Sdc2 [plasma membrane] (Rattus norvegicus)
CR:atREs:HSPG:apoE [plasma membrane] (Rattus norvegicus)
HSPGs [plasma membrane] (Rattus norvegicus)
HS(5)-PGs [plasma membrane] (Rattus norvegicus)
Sdc2 [plasma membrane] (Rattus norvegicus)
External Reference Information
External Reference
UniProt:P34900 Sdc2
Gene Names
Sdc2, Hspg1, Synd2
Chain
signal peptide:1-18, chain:19-201
Reference Genes
BioGPS Gene:25615 Sdc2
KEGG:rno:25615 Sdc2
Monarch:25615 Sdc2
NCBI Gene:25615 Sdc2
UCSC:P34900 Sdc2
Reference Transcript
RefSeq:NM_013082.3 Sdc2
Participates
as a member of
HS(5)-PGs [plasma membrane] (Rattus norvegicus)
Other forms of this molecule
Sdc2 [plasma membrane]
Sdc2 [plasma membrane]
Sdc2 [plasma membrane]
Sdc2 [plasma membrane]
Sdc2 [plasma membrane]
Sdc2 [endoplasmic reticulum lumen]
phospho-Sdc2 [endoplasmic reticulum lumen]
Sdc2 [Golgi lumen]
Sdc2 [Golgi lumen]
Sdc2 [Golgi lumen]
Sdc2 [Golgi lumen]
Sdc2 [Golgi lumen]
Sdc2 [Golgi lumen]
Sdc2 [Golgi lumen]
Sdc2 [Golgi lumen]
Sdc2 [Golgi lumen]
Sdc2 [Golgi lumen]
Sdc2 [Golgi lumen]
Sdc2 [Golgi lumen]
Sdc2 [Golgi lumen]
Sdc2 [Golgi lumen]
Sdc2 [Golgi lumen]
Sdc2 [Golgi lumen]
Sdc2 [lysosomal lumen]
Sdc2 [lysosomal lumen]
phospho-Sdc2 [plasma membrane]
Syndecan-2 [plasma membrane]
Inferred From
HS(5)-SDC2 [plasma membrane]
(Homo sapiens)
Modified Residues
Name
O-xylosyl-L-serine (ChEBI:63661) at unknown position
Modification
beta-D-IdoA-(1->4)-alpha-D-GlcNS-(1->4)-beta-D-IdoA2S-(1->4)-alpha-D-GlcNS3S-(1->4)-beta-D-GlcA-(1->3)-beta-D-Gal-(1->3)-beta-D-Gal-(1->4)-beta-D-Xyl-yl group
PsiMod Name
O-xylosyl-L-serine
PsiMod Definition
A protein modification that effectively converts an L-serine residue to O3-xylosylserine.
Cross References
RefSeq
NP_037214.1
PRO
P34900
RGD
3649
GlyGen
P34900
Interactors (2)
Accession
#Entities
Entities
Confidence Score
Evidence (IntAct)
UniProt:P34901 Sdc4
20
Sdc4 [plasma membrane]
(R-RNO-2076670)
Sdc4 [plasma membrane]
(R-RNO-2076633)
Sdc4 [plasma membrane]
(R-RNO-2076694)
Sdc4 [plasma membrane]
(R-RNO-2076653)
Sdc4 [plasma membrane]
(R-RNO-2076674)
Sdc4 [plasma membrane]
(R-RNO-2076635)
Sdc4 [Golgi lumen]
(R-RNO-2064195)
Sdc4 [Golgi lumen]
(R-RNO-2064249)
Sdc4 [Golgi lumen]
(R-RNO-2054111)
Sdc4 [Golgi lumen]
(R-RNO-2064100)
Sdc4 [Golgi lumen]
(R-RNO-2064067)
Sdc4 [Golgi lumen]
(R-RNO-2076418)
Sdc4 [Golgi lumen]
(R-RNO-2076407)
Sdc4 [Golgi lumen]
(R-RNO-2076411)
Sdc4 [Golgi lumen]
(R-RNO-2076434)
Sdc4 [Golgi lumen]
(R-RNO-2076613)
Sdc4 [Golgi lumen]
(R-RNO-2076460)
Sdc4 [Golgi lumen]
(R-RNO-2076446)
Sdc4 [Golgi lumen]
(R-RNO-2076394)
Sdc4 [Golgi lumen]
(R-RNO-2076374)
0.602
4
UniProt:P33671
20
Sdc3 [plasma membrane]
(R-RNO-2076685)
Sdc3 [plasma membrane]
(R-RNO-2076640)
Sdc3 [plasma membrane]
(R-RNO-2076692)
Sdc3 [plasma membrane]
(R-RNO-2076671)
Sdc3 [plasma membrane]
(R-RNO-2076657)
Sdc3 [plasma membrane]
(R-RNO-2076625)
Sdc3 [Golgi lumen]
(R-RNO-2064072)
Sdc3 [Golgi lumen]
(R-RNO-2063983)
Sdc3 [Golgi lumen]
(R-RNO-2054110)
Sdc3 [Golgi lumen]
(R-RNO-2064042)
Sdc3 [Golgi lumen]
(R-RNO-2064123)
Sdc3 [Golgi lumen]
(R-RNO-2076338)
Sdc3 [Golgi lumen]
(R-RNO-2076473)
Sdc3 [Golgi lumen]
(R-RNO-2076365)
Sdc3 [Golgi lumen]
(R-RNO-2076388)
Sdc3 [Golgi lumen]
(R-RNO-2076427)
Sdc3 [Golgi lumen]
(R-RNO-2076389)
Sdc3 [Golgi lumen]
(R-RNO-2076487)
Sdc3 [Golgi lumen]
(R-RNO-2076516)
Sdc3 [Golgi lumen]
(R-RNO-2076462)
0.59
2
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