Reactome | Sdc1 [plasma membrane]

Sdc1 [plasma membrane]

Stable Identifier

R-RNO-2076672

Type

Protein [EntityWithAccessionedSequence]

Species

Rattus norvegicus

Compartment

plasma membrane

Synonyms

HS(1)-SDC1, P26260

Locations in the PathwayBrowser

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External Reference Information

External Reference

UniProt:P26260

Gene Names

Sdc1

Reference Genes

BioGPS Gene:25216 Sdc1

ENSEMBL:ENSRNOG00000059947

KEGG:rno:25216 Sdc1

Monarch:25216 Sdc1

NCBI Gene:25216 Sdc1

UCSC:P26260 Sdc1

Reference Transcript

RefSeq:NM_013026.2 Sdc1

Other Identifiers

10883530

1367849_at

1376062_at

17814680

25216

5762300

5787345

5850135

6185733

6205695

6342733

6373323

6388036

6465449

6653276

A_43_P14872

GE1300951

GO:0001657

GO:0005515

GO:0005576

GO:0005886

GO:0006898

GO:0007155

GO:0007267

GO:0009636

GO:0009897

GO:0009986

GO:0016020

GO:0016192

GO:0016477

GO:0032991

GO:0038024

GO:0042542

GO:0042802

GO:0048627

GO:0048856

GO:0048870

GO:0050840

GO:0051384

GO:0051591

GO:0051592

GO:0055002

GO:0060009

GO:0060070

GO:1903543

GO:1903553

ILMN_1362746

PH_rn_0002830

S61865_s_at

X60651mRNA_s_at

Participates

as a member of

as an input of

as a component of

Other forms of this molecule

Sdc1 [plasma membrane]

Sdc1 [Golgi lumen]

Sdc1 [lysosomal lumen]

Sdc1 [Golgi lumen]

Inferred From

Syndecan-1 [plasma membrane] (Homo sapiens)

HS(1)-SDC1 [plasma membrane] (Homo sapiens)

Modified Residues

Name

O-xylosyl-L-serine (ChEBI:63652) at unknown position

Modification

beta-D-GlcA-(1->4)-alpha-D-GlcNS-(1->4)-beta-D-GlcA-(1->4)-alpha-D-GlcNS-(1->4)-beta-D-GlcA-(1->3)-beta-D-Gal-(1->3)-beta-D-Gal-(1->4)-beta-D-Xyl-yl group

PsiMod Name

O-xylosyl-L-serine

PsiMod Definition

A protein modification that effectively converts an L-serine residue to O3-xylosylserine.

Cross References

RefSeq

NP_037158.1

ENSEMBL

ENSRNOG00000059947, ENSRNOP00000072283, ENSRNOT00000086633

PRO

P26260

GlyGen

P26260

RGD

3648