Reactome | Col4a6 [extracellular region]

Col4a6 [extracellular region]

Stable Identifier

R-RNO-2468244

Type

Protein [EntityWithAccessionedSequence]

Species

Rattus norvegicus

Compartment

extracellular region

Synonyms

3x4Hyp-3Hyp-GalHyl-COL4A6(23-?), A0A0G2K601

Locations in the PathwayBrowser

Expand all

Extracellular matrix organization (Rattus norvegicus)

- Degradation of the extracellular matrix (Rattus norvegicus)
  - Collagen degradation (Rattus norvegicus)
    - Collagen type IV degradation by MMP2,3,4,9,10,12 (Rattus norvegicus)
      - Cleaved collagen type IV networks [extracellular region] (Rattus norvegicus)
        
        Cleaved collagen type IV alpha1.alpha2.alpha5.alpha6 network [extracellular region] (Rattus norvegicus)
        
        Cleaved collagen type IV alpha1.alpha2.alpha5.alpha6 tropocollagens [extracellular region] (Rattus norvegicus)
        
        Cleaved tropocollagen alpha-5(IV).alpha-5(IV).alpha-6(IV) [extracellular region] (Rattus norvegicus)
        
        Col4a6 [extracellular region] (Rattus norvegicus)
    - Gelatin degradation by MMP1, 2, 3, 7, 8, 9, 12, 13 (Rattus norvegicus)
      - Cleaved collagen fibrils [extracellular region] (Rattus norvegicus)
        
        Cleaved collagen type IV networks [extracellular region] (Rattus norvegicus)
        
        Cleaved collagen type IV alpha1.alpha2.alpha5.alpha6 network [extracellular region] (Rattus norvegicus)
        
        Cleaved collagen type IV alpha1.alpha2.alpha5.alpha6 tropocollagens [extracellular region] (Rattus norvegicus)
        
        Cleaved tropocollagen alpha-5(IV).alpha-5(IV).alpha-6(IV) [extracellular region] (Rattus norvegicus)
        
        Col4a6 [extracellular region] (Rattus norvegicus)

External Reference Information

External Reference

UniProt:A0A0G2K601

Gene Names

Col4a6

Reference Genes

ENSEMBL:ENSRNOG00000056772

UCSC:A0A0G2K601 Col4a6

Reference Transcript

RefSeq:XM_003754829.4 Col4a6

Other Identifiers

10932843

1384276_at

1386827_at

17871563

363458

5630587

5640521

5815144

5834622

5841111

5874375

5877681

5879305

5883407

5890202

5953616

5955983

5956876

6085542

6108982

6120560

6131668

6168904

6172143

6188491

6238188

6274588

6297972

6301780

6303641

6323571

6339215

6375268

6435725

6513184

6541163

6548138

6609975

6616193

6618810

6627699

6633982

6640456

6643583

6654797

6685526

6732418

A_44_P244063

A_64_P062810

A_64_P390391

GE1187691

GO:0005198

GO:0005201

GO:0005581

GO:0005587

GO:0005604

GO:0023052

GO:0030198

GO:0030312

GO:0031012

GO:0038063

GO:0071230

PH_rn_0022001

Participates

as a component of

Cleaved tropocollagen alpha-5(IV).alpha-5(IV).alpha-6(IV) [extracellular region] (Rattus norvegicus)

Other forms of this molecule

Col4a6 [endoplasmic reticulum lumen]

Col4a6 [extracellular region]

Col4a6 [endoplasmic reticulum lumen]

Inferred From

Cleaved collagen alpha-6(IV) chains [extracellular region] (Homo sapiens)

3x4Hyp-3Hyp-GalHyl-COL4A6(23-?) [extracellular region] (Homo sapiens)

Modified Residues

Name

(2S,4R)-4-hydroxyproline at unknown position

PsiMod Name

(2S,4R)-4-hydroxyproline

PsiMod Definition

A protein modification that effectively converts an L-proline residue to 4-hydroxy-L-proline

Name

(2S,4R)-4-hydroxyproline at unknown position

PsiMod Name

(2S,4R)-4-hydroxyproline

PsiMod Definition

A protein modification that effectively converts an L-proline residue to 4-hydroxy-L-proline

Name

(2S,4R)-4-hydroxyproline at unknown position

PsiMod Name

(2S,4R)-4-hydroxyproline

PsiMod Definition

A protein modification that effectively converts an L-proline residue to 4-hydroxy-L-proline

Name

(2S,3S)-3-hydroxyproline at unknown position

PsiMod Name

(2S,3S)-3-hydroxyproline

PsiMod Definition

A protein modification that effectively converts an L-proline residue to 3-hydroxy-L-proline.

Name

O5-galactosyl-L-hydroxylysine at unknown position

PsiMod Name

O5-galactosyl-L-hydroxylysine

PsiMod Definition

A protein modification that effectively converts an L-lysine residue to O5-galactosyl-L-hydroxylysine.

Cross References

RefSeq

XP_003754877.1

ENSEMBL

ENSRNOP00000073623, ENSRNOT00000079180

RGD

1589724