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FEN1 [nucleoplasm]
Stable Identifier
R-RNO-54745
Type
Protein [EntityWithAccessionedSequence]
Species
Rattus norvegicus
Compartment
nucleoplasm
Synonyms
Q5XIP6
Locations in the PathwayBrowser
Expand all
Cell Cycle (Rattus norvegicus)
Cell Cycle, Mitotic (Rattus norvegicus)
S Phase (Rattus norvegicus)
Synthesis of DNA (Rattus norvegicus)
DNA strand elongation (Rattus norvegicus)
Lagging Strand Synthesis (Rattus norvegicus)
Processive synthesis on the lagging strand (Rattus norvegicus)
Removal of the Flap Intermediate (Rattus norvegicus)
Removal of remaining Flap (Rattus norvegicus)
FEN1 [nucleoplasm] (Rattus norvegicus)
Chromosome Maintenance (Rattus norvegicus)
Telomere Maintenance (Rattus norvegicus)
Extension of Telomeres (Rattus norvegicus)
Telomere C-strand (Lagging Strand) Synthesis (Rattus norvegicus)
Processive synthesis on the C-strand of the telomere (Rattus norvegicus)
Removal of the Flap Intermediate from the C-strand (Rattus norvegicus)
Removal of remaining Flap from the C-strand (Rattus norvegicus)
FEN1 [nucleoplasm] (Rattus norvegicus)
DNA Repair (Rattus norvegicus)
Base Excision Repair (Rattus norvegicus)
Resolution of Abasic Sites (AP sites) (Rattus norvegicus)
Resolution of AP sites via the multiple-nucleotide patch replacement pathway (Rattus norvegicus)
PCNA-Dependent Long Patch Base Excision Repair (Rattus norvegicus)
PCNA:POLD,POLE:RPA:RFC and FEN1 bind APEX1 (Rattus norvegicus)
APEX1:FEN1:PCNA:POLD,POLE:RPA:RFC:SSB(3'dNMP-displaced 5'ddRP)-dsDNA [nucleoplasm] (Rattus norvegicus)
FEN1 [nucleoplasm] (Rattus norvegicus)
FEN1 [nucleoplasm] (Rattus norvegicus)
POLD,POLE-mediated DNA strand displacement synthesis (Rattus norvegicus)
APEX1:FEN1:PCNA:POLD,POLE:RPA:RFC:SSB(3'dNMP-displaced 5'ddRP)-dsDNA [nucleoplasm] (Rattus norvegicus)
FEN1 [nucleoplasm] (Rattus norvegicus)
APEX1:FEN1:PCNA:POLD,POLE:RPA:RFC:SSB(3'poly-dNMP-displaced 5'ddRP flap)-dsDNA [nucleoplasm] (Rattus norvegicus)
FEN1 [nucleoplasm] (Rattus norvegicus)
POLB-Dependent Long Patch Base Excision Repair (Rattus norvegicus)
PAR-PARP1,PAR-PARP2 dissociate from FEN1 and POLB (Rattus norvegicus)
FEN1:POLB:SSB(3'poly-dNMP-displaced 5'ddRP-FLAP)-dsDNA [nucleoplasm] (Rattus norvegicus)
FEN1 [nucleoplasm] (Rattus norvegicus)
PAR-PARP1,PAR-PARP2:FEN1:POLB:SSB(3'poly-dNMP-displaced 5'ddRP-FLAP)-dsDNA [nucleoplasm] (Rattus norvegicus)
FEN1 [nucleoplasm] (Rattus norvegicus)
PARP1,PARP2 dimers and FEN1 bind POLB and displace APEX1 from damaged AP site (Rattus norvegicus)
FEN1 [nucleoplasm] (Rattus norvegicus)
PARP1,PARP2:FEN1:POLB:SSB(3'dNMP-displaced 5'ddRP)-dsDNA [nucleoplasm] (Rattus norvegicus)
FEN1 [nucleoplasm] (Rattus norvegicus)
PARP1,PARP2 dimers bound to FEN1 and POLB autoPARylate (Rattus norvegicus)
PAR-PARP1,PAR-PARP2:FEN1:POLB:SSB(3'poly-dNMP-displaced 5'ddRP-FLAP)-dsDNA [nucleoplasm] (Rattus norvegicus)
FEN1 [nucleoplasm] (Rattus norvegicus)
PARP1,PARP2:FEN1:POLB:SSB(3'poly-dNMP-displaced 5'ddRP-FLAP)-dsDNA [nucleoplasm] (Rattus norvegicus)
FEN1 [nucleoplasm] (Rattus norvegicus)
POLB-mediated DNA strand displacement synthesis (Rattus norvegicus)
PARP1,PARP2:FEN1:POLB:SSB(3'dNMP-displaced 5'ddRP)-dsDNA [nucleoplasm] (Rattus norvegicus)
FEN1 [nucleoplasm] (Rattus norvegicus)
PARP1,PARP2:FEN1:POLB:SSB(3'poly-dNMP-displaced 5'ddRP-FLAP)-dsDNA [nucleoplasm] (Rattus norvegicus)
FEN1 [nucleoplasm] (Rattus norvegicus)
DNA Double-Strand Break Repair (Rattus norvegicus)
Homology Directed Repair (Rattus norvegicus)
HDR through MMEJ (alt-NHEJ) (Rattus norvegicus)
FEN1 cleaves displaced ssDNA flaps during MMEJ (Rattus norvegicus)
Extended microhomologous 3'-ssDNA overhangs-flap-DSB:MRN:RBBP8:FEN1 [nucleoplasm] (Rattus norvegicus)
FEN1 [nucleoplasm] (Rattus norvegicus)
FEN1 [nucleoplasm] (Rattus norvegicus)
PARP1 or PARP2, FEN1 and POLQ are recruited to MMEJ site (Rattus norvegicus)
Annealed microhomologous 3'-ssDNA overhangs-DSB:MRN:RBBP8:PARP1,PARP2:FEN1:POLQ [nucleoplasm] (Rattus norvegicus)
FEN1 [nucleoplasm] (Rattus norvegicus)
FEN1 [nucleoplasm] (Rattus norvegicus)
PARP1,PARP2 dimers bound to MMEJ sites autoPARylate (Rattus norvegicus)
Extended microhomologous 3'-ssDNA overhangs-flap-DSB:MRN:RBBP8:FEN1 [nucleoplasm] (Rattus norvegicus)
FEN1 [nucleoplasm] (Rattus norvegicus)
Extended microhomologous 3'-ssDNA overhangs-flap-DSB:MRN:RBBP8:PARP1,PARP2:FEN1:POLQ [nucleoplasm] (Rattus norvegicus)
FEN1 [nucleoplasm] (Rattus norvegicus)
POLQ extends annealed 3'-ssDNA overhangs in MMEJ (Rattus norvegicus)
Annealed microhomologous 3'-ssDNA overhangs-DSB:MRN:RBBP8:PARP1,PARP2:FEN1:POLQ [nucleoplasm] (Rattus norvegicus)
FEN1 [nucleoplasm] (Rattus norvegicus)
Extended microhomologous 3'-ssDNA overhangs-flap-DSB:MRN:RBBP8:PARP1,PARP2:FEN1:POLQ [nucleoplasm] (Rattus norvegicus)
FEN1 [nucleoplasm] (Rattus norvegicus)
DNA Replication (Rattus norvegicus)
Synthesis of DNA (Rattus norvegicus)
DNA strand elongation (Rattus norvegicus)
Lagging Strand Synthesis (Rattus norvegicus)
Processive synthesis on the lagging strand (Rattus norvegicus)
Removal of the Flap Intermediate (Rattus norvegicus)
Removal of remaining Flap (Rattus norvegicus)
FEN1 [nucleoplasm] (Rattus norvegicus)
External Reference Information
External Reference
UniProt:Q5XIP6
Reference Genes
BioGPS Gene:84490
ENSEMBL:ENSRNOG00000020531
ENSEMBL:ENSRNOG00055017939
ENSEMBL:ENSRNOG00060030600
ENSEMBL:ENSRNOG00065033963
KEGG:rno:84490
Monarch:84490
NCBI Gene:84490
UCSC:Q5XIP6
Reference Transcript
RefSeq:XM_008760246.2
RefSeq:NM_053430.1
RefSeq:XM_006231073.3
RefSeq:XM_006231074.3
RefSeq:XM_008760245.2
Other Identifiers
10728644
1367983_at
17640419
5838662
6172533
6325938
84490
A_42_P664520
A_44_P418824
GE1293652
GE13547
GO:0000781
GO:0003677
GO:0003824
GO:0004518
GO:0004523
GO:0005634
GO:0005654
GO:0005694
GO:0005730
GO:0005739
GO:0006260
GO:0008409
GO:0016787
GO:0016788
GO:0017108
GO:0032991
GO:0043137
GO:0043226
GO:0045876
GO:0048256
GO:0090304
GO:0140097
GO:0140098
ILMN_1353164
PH_rn_0006895
rc_AA819793_at
Participates
as an input of
PCNA:POLD,POLE:RPA:RFC and FEN1 bind APEX1 (Rattus norvegicus)
PARP1,PARP2 dimers and FEN1 bind POLB and displace APEX1 from damaged AP site (Rattus norvegicus)
PARP1 or PARP2, FEN1 and POLQ are recruited to MMEJ site (Rattus norvegicus)
as a component of
APEX1:FEN1:PCNA:POLD,POLE:RPA:RFC:SSB(3'poly-dNMP-displaced 5'ddRP flap)-dsDNA [nucleoplasm] (Rattus norvegicus)
APEX1:FEN1:PCNA:POLD,POLE:RPA:RFC:SSB(3'dNMP-displaced 5'ddRP)-dsDNA [nucleoplasm] (Rattus norvegicus)
PARP1,PARP2:FEN1:POLB:SSB(3'dNMP-displaced 5'ddRP)-dsDNA [nucleoplasm] (Rattus norvegicus)
PARP1,PARP2:FEN1:POLB:SSB(3'poly-dNMP-displaced 5'ddRP-FLAP)-dsDNA [nucleoplasm] (Rattus norvegicus)
PAR-PARP1,PAR-PARP2:FEN1:POLB:SSB(3'poly-dNMP-displaced 5'ddRP-FLAP)-dsDNA [nucleoplasm] (Rattus norvegicus)
FEN1:POLB:SSB(3'poly-dNMP-displaced 5'ddRP-FLAP)-dsDNA [nucleoplasm] (Rattus norvegicus)
Annealed microhomologous 3'-ssDNA overhangs-DSB:MRN:RBBP8:PARP1,PARP2:FEN1:POLQ [nucleoplasm] (Rattus norvegicus)
Extended microhomologous 3'-ssDNA overhangs-flap-DSB:MRN:RBBP8:FEN1 [nucleoplasm] (Rattus norvegicus)
Extended microhomologous 3'-ssDNA overhangs-flap-DSB:MRN:RBBP8:PARP1,PARP2:FEN1:POLQ [nucleoplasm] (Rattus norvegicus)
as an output of
FEN1 cleaves displaced ssDNA flaps during MMEJ (Rattus norvegicus)
Inferred From
FEN1 [nucleoplasm]
(Homo sapiens)
Cross References
RefSeq
XP_008758467.1
,
XP_006231135.1
,
NP_445882.1
,
XP_008758468.1
,
XP_006231136.1
ENSEMBL
ENSRNOT00000027842
,
ENSRNOP00000027842
,
ENSRNOT00000104683
,
ENSRNOP00000078106
,
ENSRNOT00000106648
,
ENSRNOP00000081266
PRO
Q5XIP6
RGD
621821
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