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Pnkp [nucleoplasm]
Stable Identifier
R-RNO-5649651
Type
Protein [EntityWithAccessionedSequence]
Species
Rattus norvegicus
Compartment
nucleoplasm
Synonyms
PNKP, A0A0G2JUH4
Locations in the PathwayBrowser
Expand all
DNA Repair (Rattus norvegicus)
Base Excision Repair (Rattus norvegicus)
Resolution of Abasic Sites (AP sites) (Rattus norvegicus)
APEX1-Independent Resolution of AP Sites via the Single Nucleotide Replacement Pathway (Rattus norvegicus)
LIG3 ligates NEIL1,NEIL2-generated single strand break (Rattus norvegicus)
NEIL1,NEIL2:PNKP:POLB:LIG3:XRCC1:SSB-dsDNA [nucleoplasm] (Rattus norvegicus)
Pnkp [nucleoplasm] (Rattus norvegicus)
NEIL1,NEIL2:PNKP:POLB:LIG3:XRCC1:dsDNA [nucleoplasm] (Rattus norvegicus)
Pnkp [nucleoplasm] (Rattus norvegicus)
LIG3:XRCC1 and PNKP bind NEIL1,NEIL2:POLB:SSB(3'Pi)-gap-dsDNA (Rattus norvegicus)
NEIL1,NEIL2:PNKP:POLB:LIG3:XRCC1:SSB(3'Pi)-gap-dsDNA [nucleoplasm] (Rattus norvegicus)
Pnkp [nucleoplasm] (Rattus norvegicus)
Pnkp [nucleoplasm] (Rattus norvegicus)
PNKP hydrolyzes the terminal 3'Pi at the NEIL1,NEIL2-generated single strand break (SSB) (Rattus norvegicus)
NEIL1,NEIL2:PNKP:POLB:LIG3:XRCC1:SSB(3'Pi)-gap-dsDNA [nucleoplasm] (Rattus norvegicus)
Pnkp [nucleoplasm] (Rattus norvegicus)
NEIL1,NEIL2:POLB:LIG3:XRCC1:PNKP:SSB-gap-dsDNA [nucleoplasm] (Rattus norvegicus)
Pnkp [nucleoplasm] (Rattus norvegicus)
Pnkp [nucleoplasm] (Rattus norvegicus)
POLB incorporates a single nucleotide in place of excised AP residue in NEIL1,NEIL2-mediated AP site resolution (Rattus norvegicus)
NEIL1,NEIL2:PNKP:POLB:LIG3:XRCC1:SSB-dsDNA [nucleoplasm] (Rattus norvegicus)
Pnkp [nucleoplasm] (Rattus norvegicus)
NEIL1,NEIL2:POLB:LIG3:XRCC1:PNKP:SSB-gap-dsDNA [nucleoplasm] (Rattus norvegicus)
Pnkp [nucleoplasm] (Rattus norvegicus)
External Reference Information
External Reference
UniProt:A0A0G2JUH4
Gene Names
Pnkp
Reference Genes
ENSEMBL:ENSRNOG00000020318
UCSC:A0A0G2JUH4 Pnkp
Other Identifiers
10706650
1393367_at
17616142
308576
5623907
5641029
5648003
5719656
5998335
6061050
6139658
6180832
6220388
6240095
6275578
6359057
6403388
6432161
6473932
6495194
6603915
6621010
6658130
6676983
A_43_P22480
A_64_P087786
GE1210198
GO:0003824
GO:0005515
GO:0005634
GO:0005654
GO:0005694
GO:0005730
GO:0006281
GO:0006303
GO:0006979
GO:0016740
GO:0016787
GO:0032200
GO:0032212
GO:0035861
GO:0043226
GO:0046403
GO:0046404
GO:0051103
GO:1904355
GO:2001034
ILMN_1371479
PH_rn_0008877
Participates
as an input of
LIG3:XRCC1 and PNKP bind NEIL1,NEIL2:POLB:SSB(3'Pi)-gap-dsDNA (Rattus norvegicus)
as a component of
NEIL1,NEIL2:PNKP:POLB:LIG3:XRCC1:SSB(3'Pi)-gap-dsDNA [nucleoplasm] (Rattus norvegicus)
NEIL1,NEIL2:POLB:LIG3:XRCC1:PNKP:SSB-gap-dsDNA [nucleoplasm] (Rattus norvegicus)
NEIL1,NEIL2:PNKP:POLB:LIG3:XRCC1:dsDNA [nucleoplasm] (Rattus norvegicus)
NEIL1,NEIL2:PNKP:POLB:LIG3:XRCC1:SSB-dsDNA [nucleoplasm] (Rattus norvegicus)
Inferred From
PNKP [nucleoplasm]
(Homo sapiens)
Cross References
ENSEMBL
ENSRNOP00000069099
,
ENSRNOT00000083551
RGD
1303331
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