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Taf5 [nucleoplasm]
Stable Identifier
R-RNO-65543
Type
Protein [EntityWithAccessionedSequence]
Species
Rattus norvegicus
Compartment
nucleoplasm
Synonyms
TAF5, D3ZH66
Locations in the PathwayBrowser
Expand all
Gene expression (Transcription) (Rattus norvegicus)
RNA Polymerase II Transcription (Rattus norvegicus)
Generic Transcription Pathway (Rattus norvegicus)
Transcriptional Regulation by TP53 (Rattus norvegicus)
Regulation of TP53 Activity (Rattus norvegicus)
Regulation of TP53 Activity through Phosphorylation (Rattus norvegicus)
TAF1 phosphorylates TP53 (Rattus norvegicus)
TFIID [nucleoplasm] (Rattus norvegicus)
Taf5 [nucleoplasm] (Rattus norvegicus)
RNA Polymerase II Pre-transcription Events (Rattus norvegicus)
Abortive Initiation Before Second Transition (Rattus norvegicus)
Pol II Promoter Escape Complex [nucleoplasm] (Rattus norvegicus)
TFIID [nucleoplasm] (Rattus norvegicus)
Taf5 [nucleoplasm] (Rattus norvegicus)
TFIID [nucleoplasm] (Rattus norvegicus)
Taf5 [nucleoplasm] (Rattus norvegicus)
Abortive initiation after formation of the first phosphodiester bond (Rattus norvegicus)
TFIID [nucleoplasm] (Rattus norvegicus)
Taf5 [nucleoplasm] (Rattus norvegicus)
pol II transcription complex [nucleoplasm] (Rattus norvegicus)
TFIID [nucleoplasm] (Rattus norvegicus)
Taf5 [nucleoplasm] (Rattus norvegicus)
Fall Back to Closed Pre-initiation Complex (Rattus norvegicus)
pol II closed pre-initiation complex [nucleoplasm] (Rattus norvegicus)
pol II promoter:TFIID:TFIIA:TFIIB:Pol II:TFIIF complex [nucleoplasm] (Rattus norvegicus)
pol II promoter:TFIID:TFIIA:TFIIB complex [nucleoplasm] (Rattus norvegicus)
pol II promoter:TFIID complex [nucleoplasm] (Rattus norvegicus)
TFIID [nucleoplasm] (Rattus norvegicus)
Taf5 [nucleoplasm] (Rattus norvegicus)
pol II open pre-initiation complex [nucleoplasm] (Rattus norvegicus)
TFIID [nucleoplasm] (Rattus norvegicus)
Taf5 [nucleoplasm] (Rattus norvegicus)
RNA Polymerase II Transcription Initiation And Promoter Clearance (Rattus norvegicus)
RNA Polymerase II Promoter Escape (Rattus norvegicus)
Addition of Nucleotides 5 through 9 on the growing Transcript (Rattus norvegicus)
TFIID [nucleoplasm] (Rattus norvegicus)
Taf5 [nucleoplasm] (Rattus norvegicus)
pol II transcription complex containing 4 nucleotide long transcript [nucleoplasm] (Rattus norvegicus)
TFIID [nucleoplasm] (Rattus norvegicus)
Taf5 [nucleoplasm] (Rattus norvegicus)
Addition of the fourth nucleotide on the Nascent Transcript: Second Transition (Rattus norvegicus)
pol II transcription complex containing 3 Nucleotide long transcript [nucleoplasm] (Rattus norvegicus)
TFIID [nucleoplasm] (Rattus norvegicus)
Taf5 [nucleoplasm] (Rattus norvegicus)
pol II transcription complex containing 4 nucleotide long transcript [nucleoplasm] (Rattus norvegicus)
TFIID [nucleoplasm] (Rattus norvegicus)
Taf5 [nucleoplasm] (Rattus norvegicus)
Addition of the third nucleotide on the nascent transcript (Rattus norvegicus)
pol II transcription complex [nucleoplasm] (Rattus norvegicus)
TFIID [nucleoplasm] (Rattus norvegicus)
Taf5 [nucleoplasm] (Rattus norvegicus)
pol II transcription complex containing 3 Nucleotide long transcript [nucleoplasm] (Rattus norvegicus)
TFIID [nucleoplasm] (Rattus norvegicus)
Taf5 [nucleoplasm] (Rattus norvegicus)
Unwinding DNA for the nascent transcript (Rattus norvegicus)
pol II transcription complex [nucleoplasm] (Rattus norvegicus)
TFIID [nucleoplasm] (Rattus norvegicus)
Taf5 [nucleoplasm] (Rattus norvegicus)
Unwinding of DNA for the Nascent Transcript: Second Transition (Rattus norvegicus)
pol II transcription complex containing 3 Nucleotide long transcript [nucleoplasm] (Rattus norvegicus)
TFIID [nucleoplasm] (Rattus norvegicus)
Taf5 [nucleoplasm] (Rattus norvegicus)
RNA Polymerase II Promoter Opening: First Transition (Rattus norvegicus)
pol II closed pre-initiation complex [nucleoplasm] (Rattus norvegicus)
pol II promoter:TFIID:TFIIA:TFIIB:Pol II:TFIIF complex [nucleoplasm] (Rattus norvegicus)
pol II promoter:TFIID:TFIIA:TFIIB complex [nucleoplasm] (Rattus norvegicus)
pol II promoter:TFIID complex [nucleoplasm] (Rattus norvegicus)
TFIID [nucleoplasm] (Rattus norvegicus)
Taf5 [nucleoplasm] (Rattus norvegicus)
pol II open pre-initiation complex [nucleoplasm] (Rattus norvegicus)
TFIID [nucleoplasm] (Rattus norvegicus)
Taf5 [nucleoplasm] (Rattus norvegicus)
RNA Polymerase II Transcription Initiation (Rattus norvegicus)
NTP Binds Active Site of RNA Polymerase II (Rattus norvegicus)
Pol II initiation complex [nucleoplasm] (Rattus norvegicus)
TFIID [nucleoplasm] (Rattus norvegicus)
Taf5 [nucleoplasm] (Rattus norvegicus)
pol II open pre-initiation complex [nucleoplasm] (Rattus norvegicus)
TFIID [nucleoplasm] (Rattus norvegicus)
Taf5 [nucleoplasm] (Rattus norvegicus)
Newly Formed Phosphodiester Bond Stabilized and PPi Released (Rattus norvegicus)
Pol II Initiation complex with phosphodiester-PPi intermediate [nucleoplasm] (Rattus norvegicus)
TFIID [nucleoplasm] (Rattus norvegicus)
Taf5 [nucleoplasm] (Rattus norvegicus)
pol II transcription complex [nucleoplasm] (Rattus norvegicus)
TFIID [nucleoplasm] (Rattus norvegicus)
Taf5 [nucleoplasm] (Rattus norvegicus)
Nucleophillic Attack by 3'-hydroxyl Oxygen of nascent transcript on the Alpha Phosphate of NTP (Rattus norvegicus)
Pol II Initiation complex with phosphodiester-PPi intermediate [nucleoplasm] (Rattus norvegicus)
TFIID [nucleoplasm] (Rattus norvegicus)
Taf5 [nucleoplasm] (Rattus norvegicus)
Pol II initiation complex [nucleoplasm] (Rattus norvegicus)
TFIID [nucleoplasm] (Rattus norvegicus)
Taf5 [nucleoplasm] (Rattus norvegicus)
RNA Polymerase II Transcription Pre-Initiation And Promoter Opening (Rattus norvegicus)
Binding of TFIIA and TFIIB to the pol II promoter:TFIID complex (Rattus norvegicus)
pol II promoter:TFIID complex [nucleoplasm] (Rattus norvegicus)
TFIID [nucleoplasm] (Rattus norvegicus)
Taf5 [nucleoplasm] (Rattus norvegicus)
pol II promoter:TFIID:TFIIA:TFIIB complex [nucleoplasm] (Rattus norvegicus)
pol II promoter:TFIID complex [nucleoplasm] (Rattus norvegicus)
TFIID [nucleoplasm] (Rattus norvegicus)
Taf5 [nucleoplasm] (Rattus norvegicus)
Binding of TFIIE to the growing preinitiation complex (Rattus norvegicus)
pol II promoter:TFIID:TFIIA:TFIIB:Pol II:TFIIF complex [nucleoplasm] (Rattus norvegicus)
pol II promoter:TFIID:TFIIA:TFIIB complex [nucleoplasm] (Rattus norvegicus)
pol II promoter:TFIID complex [nucleoplasm] (Rattus norvegicus)
TFIID [nucleoplasm] (Rattus norvegicus)
Taf5 [nucleoplasm] (Rattus norvegicus)
pol II promoter:TFIID:TFIIA:TFIIB:Pol II:TFIIF:TFIIE complex [nucleoplasm] (Rattus norvegicus)
pol II promoter:TFIID:TFIIA:TFIIB:Pol II:TFIIF complex [nucleoplasm] (Rattus norvegicus)
pol II promoter:TFIID:TFIIA:TFIIB complex [nucleoplasm] (Rattus norvegicus)
pol II promoter:TFIID complex [nucleoplasm] (Rattus norvegicus)
TFIID [nucleoplasm] (Rattus norvegicus)
Taf5 [nucleoplasm] (Rattus norvegicus)
Formation of the closed pre-initiation complex (Rattus norvegicus)
pol II closed pre-initiation complex [nucleoplasm] (Rattus norvegicus)
pol II promoter:TFIID:TFIIA:TFIIB:Pol II:TFIIF complex [nucleoplasm] (Rattus norvegicus)
pol II promoter:TFIID:TFIIA:TFIIB complex [nucleoplasm] (Rattus norvegicus)
pol II promoter:TFIID complex [nucleoplasm] (Rattus norvegicus)
TFIID [nucleoplasm] (Rattus norvegicus)
Taf5 [nucleoplasm] (Rattus norvegicus)
pol II promoter:TFIID:TFIIA:TFIIB:Pol II:TFIIF:TFIIE complex [nucleoplasm] (Rattus norvegicus)
pol II promoter:TFIID:TFIIA:TFIIB:Pol II:TFIIF complex [nucleoplasm] (Rattus norvegicus)
pol II promoter:TFIID:TFIIA:TFIIB complex [nucleoplasm] (Rattus norvegicus)
pol II promoter:TFIID complex [nucleoplasm] (Rattus norvegicus)
TFIID [nucleoplasm] (Rattus norvegicus)
Taf5 [nucleoplasm] (Rattus norvegicus)
Recognition and Binding of Core Promoter Elements by TFIID (Rattus norvegicus)
TFIID [nucleoplasm] (Rattus norvegicus)
Taf5 [nucleoplasm] (Rattus norvegicus)
pol II promoter:TFIID complex [nucleoplasm] (Rattus norvegicus)
TFIID [nucleoplasm] (Rattus norvegicus)
Taf5 [nucleoplasm] (Rattus norvegicus)
Recruitment of RNA Polymerase II Holoenzyme by TFIIF to the pol II promoter:TFIID:TFIIA:TFIIB complex (Rattus norvegicus)
pol II promoter:TFIID:TFIIA:TFIIB complex [nucleoplasm] (Rattus norvegicus)
pol II promoter:TFIID complex [nucleoplasm] (Rattus norvegicus)
TFIID [nucleoplasm] (Rattus norvegicus)
Taf5 [nucleoplasm] (Rattus norvegicus)
pol II promoter:TFIID:TFIIA:TFIIB:Pol II:TFIIF complex [nucleoplasm] (Rattus norvegicus)
pol II promoter:TFIID:TFIIA:TFIIB complex [nucleoplasm] (Rattus norvegicus)
pol II promoter:TFIID complex [nucleoplasm] (Rattus norvegicus)
TFIID [nucleoplasm] (Rattus norvegicus)
Taf5 [nucleoplasm] (Rattus norvegicus)
RNA polymerase II transcribes snRNA genes (Rattus norvegicus)
CBCAP complex binds 7-methylguanosine cap of snRNA (Rattus norvegicus)
RNA polymerase II (phosphoserine-2,7):RPAP2:Integrator:LEC:CBCAP:capped pre-snRNA:Initiation factors:snRNA gene [nucleoplasm] (Rattus norvegicus)
Initiation factors:CDK7:snRNA gene [nucleoplasm] (Rattus norvegicus)
snTAFc [nucleoplasm] (Rattus norvegicus)
Taf5 [nucleoplasm] (Rattus norvegicus)
RNA polymerase II (phosphoserine-2,7):RPAP2:Integrator:LEC:capped pre-snRNA:Initiation factors:snRNA gene [nucleoplasm] (Rattus norvegicus)
Initiation factors:CDK7:snRNA gene [nucleoplasm] (Rattus norvegicus)
snTAFc [nucleoplasm] (Rattus norvegicus)
Taf5 [nucleoplasm] (Rattus norvegicus)
CDK7 phosphorylates serine-5 and serine-7 of heptad repeats in C-terminal domain of RNA polymerase II at snRNA promoter (Rattus norvegicus)
RNA polymerase II (phosphoserine-5,7):Initiation factors:CDK7:snRNA gene [nucleoplasm] (Rattus norvegicus)
Initiation factors:CDK7:snRNA gene [nucleoplasm] (Rattus norvegicus)
snTAFc [nucleoplasm] (Rattus norvegicus)
Taf5 [nucleoplasm] (Rattus norvegicus)
RNA polymerase II (unphosphorylated):Initiation factors at promoter of snRNA gene [nucleoplasm] (Rattus norvegicus)
RNA polymerase II (unphosphorylated):Initiation factors [nucleoplasm] (Rattus norvegicus)
snTAFc [nucleoplasm] (Rattus norvegicus)
Taf5 [nucleoplasm] (Rattus norvegicus)
General transcription factors bind SNAPc:POU2F1:ZNF143:snRNA gene (Rattus norvegicus)
Initiation factors:CDK7:snRNA gene [nucleoplasm] (Rattus norvegicus)
snTAFc [nucleoplasm] (Rattus norvegicus)
Taf5 [nucleoplasm] (Rattus norvegicus)
snTAFc [nucleoplasm] (Rattus norvegicus)
Taf5 [nucleoplasm] (Rattus norvegicus)
Integrator complex processes the 3' end of snRNA (Rattus norvegicus)
RNA polymerase II (phosphoserine-2,7):RPAP2:Integrator:LEC:CBCAP:capped pre-snRNA:Initiation factors:snRNA gene [nucleoplasm] (Rattus norvegicus)
Initiation factors:CDK7:snRNA gene [nucleoplasm] (Rattus norvegicus)
snTAFc [nucleoplasm] (Rattus norvegicus)
Taf5 [nucleoplasm] (Rattus norvegicus)
RNA polymerase II (phosphoserine-2,7):RPAP2:Integrator:LEC:Initiation factors:snRNA gene [nucleoplasm] (Rattus norvegicus)
Initiation factors:CDK7:snRNA gene [nucleoplasm] (Rattus norvegicus)
snTAFc [nucleoplasm] (Rattus norvegicus)
Taf5 [nucleoplasm] (Rattus norvegicus)
Pre-snRNA is elongated and capped with 7-methylguanosine (Rattus norvegicus)
RNA polymerase II (phosphoserine-2,7):RPAP2:Integrator:LEC:capped pre-snRNA:Initiation factors:snRNA gene [nucleoplasm] (Rattus norvegicus)
Initiation factors:CDK7:snRNA gene [nucleoplasm] (Rattus norvegicus)
snTAFc [nucleoplasm] (Rattus norvegicus)
Taf5 [nucleoplasm] (Rattus norvegicus)
RNA polymerase II (phosphoserine-5,7):RPRD1A,B:RPRD2:RPAP2:Integrator:LEC:pre-snRNA:Initiation factors:snRNA gene [nucleoplasm] (Rattus norvegicus)
Initiation factors:CDK7:snRNA gene [nucleoplasm] (Rattus norvegicus)
snTAFc [nucleoplasm] (Rattus norvegicus)
Taf5 [nucleoplasm] (Rattus norvegicus)
Pre-snRNA transcript initiation, Integrator binding, LEC binding (Rattus norvegicus)
RNA polymerase II (phosphoserine-5,7):RPRD1A,B:RPRD2:RPAP2:Integrator:LEC:pre-snRNA:Initiation factors:snRNA gene [nucleoplasm] (Rattus norvegicus)
Initiation factors:CDK7:snRNA gene [nucleoplasm] (Rattus norvegicus)
snTAFc [nucleoplasm] (Rattus norvegicus)
Taf5 [nucleoplasm] (Rattus norvegicus)
RPAP2:RPRD1A,B:RPRD2:RNA polymerase II (phosphoserine-5,7):Initiation factors:snRNA gene [nucleoplasm] (Rattus norvegicus)
Initiation factors:CDK7:snRNA gene [nucleoplasm] (Rattus norvegicus)
snTAFc [nucleoplasm] (Rattus norvegicus)
Taf5 [nucleoplasm] (Rattus norvegicus)
RNA polymerase II binds initiation factors at promoter of snRNA gene (U1, U2, U4, U4atac, U5, U11, U12) (Rattus norvegicus)
Initiation factors:CDK7:snRNA gene [nucleoplasm] (Rattus norvegicus)
snTAFc [nucleoplasm] (Rattus norvegicus)
Taf5 [nucleoplasm] (Rattus norvegicus)
RNA polymerase II (unphosphorylated):Initiation factors at promoter of snRNA gene [nucleoplasm] (Rattus norvegicus)
RNA polymerase II (unphosphorylated):Initiation factors [nucleoplasm] (Rattus norvegicus)
snTAFc [nucleoplasm] (Rattus norvegicus)
Taf5 [nucleoplasm] (Rattus norvegicus)
RPAP2 binds RNA polymerase II phosphorylated at serine-7 residues of heptad repeats in the C-terminal domain (Rattus norvegicus)
RNA polymerase II (phosphoserine-5,7):Initiation factors:CDK7:snRNA gene [nucleoplasm] (Rattus norvegicus)
Initiation factors:CDK7:snRNA gene [nucleoplasm] (Rattus norvegicus)
snTAFc [nucleoplasm] (Rattus norvegicus)
Taf5 [nucleoplasm] (Rattus norvegicus)
RPAP2:RPRD1A,B:RPRD2:RNA polymerase II (phosphoserine-5,7):Initiation factors:snRNA gene [nucleoplasm] (Rattus norvegicus)
Initiation factors:CDK7:snRNA gene [nucleoplasm] (Rattus norvegicus)
snTAFc [nucleoplasm] (Rattus norvegicus)
Taf5 [nucleoplasm] (Rattus norvegicus)
External Reference Information
External Reference
UniProt:D3ZH66
Gene Names
Taf5
Reference Genes
BioGPS Gene:294018 Taf5
ENSEMBL:ENSRNOG00000020274
ENSEMBL:ENSRNOG00000020274.5 Taf5
KEGG Gene (Rattus norvegicus):294018 Taf5
Monarch:294018 Taf5
NCBI Gene:294018 Taf5
UCSC:D3ZH66 Taf5
Reference Transcript
RefSeq:NM_001106365.1 Taf5
Other Identifiers
10715904
1376050_at
17626246
294018
5683985
5891025
5904268
5966933
5978545
5990367
6026210
6111172
6147334
6222484
6262227
6328308
6420471
6629044
6637093
6640693
6709553
6716609
6742986
A_44_P173156
GE14523
GO:0000785
GO:0005515
GO:0005634
GO:0005654
GO:0005669
GO:0005694
GO:0005856
GO:0006351
GO:0006352
GO:0006355
GO:0006357
GO:0006367
GO:0015629
GO:0016071
GO:0016251
GO:0033276
GO:0042789
GO:0042802
GO:0043226
GO:0051123
GO:0060261
GO:0065003
GO:0140223
ILMN_1357593
PH_rn_0010433
rc_AI177663_at
Participates
as a component of
snTAFc [nucleoplasm] (Rattus norvegicus)
TFIID [nucleoplasm] (Rattus norvegicus)
Inferred From
TAF5 [nucleoplasm]
(Homo sapiens)
Cross References
RefSeq
NP_001099835.1
Ensembl
ENSRNOT00000027482
,
ENSRNOP00000027482
,
ENSRNOG00000020274
RGD
1311332
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