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Rpl13 [cytosol]
Stable Identifier
R-RNO-72410
Type
Protein [EntityWithAccessionedSequence]
Species
Rattus norvegicus
Compartment
cytosol
Synonyms
RPL13, P41123
Locations in the PathwayBrowser
Expand all
Metabolism of RNA (Rattus norvegicus)
Nonsense-Mediated Decay (NMD) (Rattus norvegicus)
Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC) (Rattus norvegicus)
SMG1 phosphorylates UPF1 (enhanced by Exon Junction Complex) (Rattus norvegicus)
SMG1:Phosphorylated UPF1:EJC:Translated mRNP [cytosol] (Rattus norvegicus)
Translated mRNA Complex with Premature Termination Codon Preceding Exon Junction [cytosol] (Rattus norvegicus)
80S ribosome [cytosol] (Rattus norvegicus)
60S ribosomal complex [cytosol] (Rattus norvegicus)
Rpl13 [cytosol] (Rattus norvegicus)
SMG1:UPF1:EJC:Translated mRNP [cytosol] (Rattus norvegicus)
Translated mRNA Complex with Premature Termination Codon Preceding Exon Junction [cytosol] (Rattus norvegicus)
80S ribosome [cytosol] (Rattus norvegicus)
60S ribosomal complex [cytosol] (Rattus norvegicus)
Rpl13 [cytosol] (Rattus norvegicus)
SMG6 hydrolyzes mRNA with premature termination codon (Rattus norvegicus)
Phosphorylated UPF1:SMG5:SMG7:SMG6:PP2A:Translated mRNP [cytosol] (Rattus norvegicus)
Translated mRNA Complex with Premature Termination Codon Preceding Exon Junction [cytosol] (Rattus norvegicus)
80S ribosome [cytosol] (Rattus norvegicus)
60S ribosomal complex [cytosol] (Rattus norvegicus)
Rpl13 [cytosol] (Rattus norvegicus)
UPF1 binds an mRNP with a termination codon preceding an Exon Junction Complex (Rattus norvegicus)
SMG1:UPF1:EJC:Translated mRNP [cytosol] (Rattus norvegicus)
Translated mRNA Complex with Premature Termination Codon Preceding Exon Junction [cytosol] (Rattus norvegicus)
80S ribosome [cytosol] (Rattus norvegicus)
60S ribosomal complex [cytosol] (Rattus norvegicus)
Rpl13 [cytosol] (Rattus norvegicus)
Translated mRNA Complex with Premature Termination Codon Preceding Exon Junction [cytosol] (Rattus norvegicus)
80S ribosome [cytosol] (Rattus norvegicus)
60S ribosomal complex [cytosol] (Rattus norvegicus)
Rpl13 [cytosol] (Rattus norvegicus)
p-4S-UPF1 recruits SMG5, SMG7, SMG6, PNRC2, DCP1A, and PP2A (Rattus norvegicus)
Phosphorylated UPF1:SMG5:SMG7:SMG6:PP2A:Translated mRNP [cytosol] (Rattus norvegicus)
Translated mRNA Complex with Premature Termination Codon Preceding Exon Junction [cytosol] (Rattus norvegicus)
80S ribosome [cytosol] (Rattus norvegicus)
60S ribosomal complex [cytosol] (Rattus norvegicus)
Rpl13 [cytosol] (Rattus norvegicus)
SMG1:Phosphorylated UPF1:EJC:Translated mRNP [cytosol] (Rattus norvegicus)
Translated mRNA Complex with Premature Termination Codon Preceding Exon Junction [cytosol] (Rattus norvegicus)
80S ribosome [cytosol] (Rattus norvegicus)
60S ribosomal complex [cytosol] (Rattus norvegicus)
Rpl13 [cytosol] (Rattus norvegicus)
Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC) (Rattus norvegicus)
Formation of UPF1:eRF3 complex on mRNA with a premature termination codon and no Exon Junction Complex (Rattus norvegicus)
Translated mRNA Complex with Premature Termination Codon Not Preceding Exon Junction [cytosol] (Rattus norvegicus)
80S ribosome [cytosol] (Rattus norvegicus)
60S ribosomal complex [cytosol] (Rattus norvegicus)
Rpl13 [cytosol] (Rattus norvegicus)
UPF1:eRF3 Complex on Translated mRNA [cytosol] (Rattus norvegicus)
Translated mRNA Complex with Premature Termination Codon Not Preceding Exon Junction [cytosol] (Rattus norvegicus)
80S ribosome [cytosol] (Rattus norvegicus)
60S ribosomal complex [cytosol] (Rattus norvegicus)
Rpl13 [cytosol] (Rattus norvegicus)
rRNA processing (Rattus norvegicus)
rRNA processing in the nucleus and cytosol (Rattus norvegicus)
Major pathway of rRNA processing in the nucleolus and cytosol (Rattus norvegicus)
12S pre-rRNA is nucleolytically processed to yield 5.8S rRNA (Rattus norvegicus)
60S ribosomal complex [cytosol] (Rattus norvegicus)
Rpl13 [cytosol] (Rattus norvegicus)
Metabolism of proteins (Rattus norvegicus)
Translation (Rattus norvegicus)
Eukaryotic Translation Initiation (Rattus norvegicus)
Cap-dependent Translation Initiation (Rattus norvegicus)
Formation of a pool of free 40S subunits (Rattus norvegicus)
Release of 40S and 60S subunits from the 80S ribosome (Rattus norvegicus)
60S ribosomal complex [cytosol] (Rattus norvegicus)
Rpl13 [cytosol] (Rattus norvegicus)
80S ribosome [cytosol] (Rattus norvegicus)
60S ribosomal complex [cytosol] (Rattus norvegicus)
Rpl13 [cytosol] (Rattus norvegicus)
GTP hydrolysis and joining of the 60S ribosomal subunit (Rattus norvegicus)
The 60S subunit joins the translation initiation complex (Rattus norvegicus)
60S ribosomal complex [cytosol] (Rattus norvegicus)
Rpl13 [cytosol] (Rattus norvegicus)
80S:Met-tRNAi:mRNA:eIF5B:GTP [cytosol] (Rattus norvegicus)
80S ribosome [cytosol] (Rattus norvegicus)
60S ribosomal complex [cytosol] (Rattus norvegicus)
Rpl13 [cytosol] (Rattus norvegicus)
eIF5B:GTP is hydrolyzed and released (Rattus norvegicus)
80S:Met-tRNAi:mRNA [cytosol] (Rattus norvegicus)
80S ribosome [cytosol] (Rattus norvegicus)
60S ribosomal complex [cytosol] (Rattus norvegicus)
Rpl13 [cytosol] (Rattus norvegicus)
80S:Met-tRNAi:mRNA:eIF5B:GTP [cytosol] (Rattus norvegicus)
80S ribosome [cytosol] (Rattus norvegicus)
60S ribosomal complex [cytosol] (Rattus norvegicus)
Rpl13 [cytosol] (Rattus norvegicus)
L13a-mediated translational silencing of Ceruloplasmin expression (Rattus norvegicus)
Dissociation of L13a from the 60s ribosomal subunit (Rattus norvegicus)
60S ribosomal complex [cytosol] (Rattus norvegicus)
Rpl13 [cytosol] (Rattus norvegicus)
60s ribosomal complex lacking L13a subunit [cytosol] (Rattus norvegicus)
Rpl13 [cytosol] (Rattus norvegicus)
SRP-dependent cotranslational protein targeting to membrane (Rattus norvegicus)
Nascent polypeptide:mRNA:ribosome complex binds signal recognition particle (SRP) (Rattus norvegicus)
SRP:polypeptide+signal:ribosome [cytosol] (Rattus norvegicus)
ribosome:mRNA:polypeptide+signal [cytosol] (Rattus norvegicus)
80S ribosome [cytosol] (Rattus norvegicus)
60S ribosomal complex [cytosol] (Rattus norvegicus)
Rpl13 [cytosol] (Rattus norvegicus)
ribosome:mRNA:polypeptide+signal [cytosol] (Rattus norvegicus)
80S ribosome [cytosol] (Rattus norvegicus)
60S ribosomal complex [cytosol] (Rattus norvegicus)
Rpl13 [cytosol] (Rattus norvegicus)
External Reference Information
External Reference
UniProt:P41123
Gene Names
Rpl13
Reference Genes
BioGPS Gene:81765 Rpl13
ENSEMBL:ENSRNOG00000015335
ENSEMBL:ENSRNOG00000015335.7 Rpl13
ENSEMBL:ENSRNOG00000029227
ENSEMBL:ENSRNOG00055006114
ENSEMBL:ENSRNOG00055020618
ENSEMBL:ENSRNOG00060016074
ENSEMBL:ENSRNOG00060018588
ENSEMBL:ENSRNOG00065018849
KEGG Gene (Rattus norvegicus):81765 Rpl13
Monarch:81765 Rpl13
NCBI Gene:81765 Rpl13
UCSC:P41123 Rpl13
Reference Transcript
RefSeq:NM_031101.1 Rpl13
Other Identifiers
10733688
10774102
10777032
10808595
10851386
10883459
10914849
1386858_at
17730854
17849472
5707446
5715665
5750363
5799535
5871076
5906736
5992864
5996613
6035845
6082530
6270741
6384756
6484691
6572312
6591915
81765
A_64_P029673
GO:0003735
GO:0005198
GO:0005840
GO:0006412
GO:0043226
ILMN_1354937
X78327_at
Participates
as a component of
60s ribosomal complex lacking L13a subunit [cytosol] (Rattus norvegicus)
60S ribosomal complex [cytosol] (Rattus norvegicus)
Inferred From
RPL13 [cytosol]
(Homo sapiens)
Cross References
RefSeq
NP_112363.1
Ensembl
ENSRNOG00000015335
,
ENSRNOT00000020635
,
ENSRNOP00000020635
PRO
P41123
RGD
621179
PDB
7QGG
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