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LSM1 [cytosol]
Stable Identifier
R-SCE-429976
Type
Protein [EntityWithAccessionedSequence]
Species
Saccharomyces cerevisiae
Compartment
cytosol
Synonyms
LSM1, P47017
Locations in the PathwayBrowser
Expand all
Metabolism of RNA (Saccharomyces cerevisiae)
Deadenylation-dependent mRNA decay (Saccharomyces cerevisiae)
mRNA decay by 5' to 3' exoribonuclease (Saccharomyces cerevisiae)
DCP1-DCP2 complex decaps mRNA (Saccharomyces cerevisiae)
Deadenylated mRNA:Lsm1-7 Complex [cytosol] (Saccharomyces cerevisiae)
Lsm1-7 Complex [cytosol] (Saccharomyces cerevisiae)
LSM1 [cytosol] (Saccharomyces cerevisiae)
Decapped mRNA:LSM1-7 Complex [cytosol] (Saccharomyces cerevisiae)
Lsm1-7 Complex [cytosol] (Saccharomyces cerevisiae)
LSM1 [cytosol] (Saccharomyces cerevisiae)
Lsm1-7 Complex binds deadenylated mRNA (Saccharomyces cerevisiae)
Deadenylated mRNA:Lsm1-7 Complex [cytosol] (Saccharomyces cerevisiae)
Lsm1-7 Complex [cytosol] (Saccharomyces cerevisiae)
LSM1 [cytosol] (Saccharomyces cerevisiae)
Lsm1-7 Complex [cytosol] (Saccharomyces cerevisiae)
LSM1 [cytosol] (Saccharomyces cerevisiae)
External Reference Information
External Reference
UniProt:P47017
Gene Names
LSM1
Reference Genes
BioGPS Gene:853318 LSM1
ENSEMBL:YJL124C
KEGG Gene (Saccharomyces cerevisiae (strain RM11-1a)):YJL124C LSM1
Monarch:853318 LSM1
NCBI Gene:853318 LSM1
SGD:YJL124C
Reference Transcript
RefSeq:NM_001181557.1 LSM1
Other Identifiers
11125_at
1773172_at
853318
GO:0000288
GO:0000290
GO:0000339
GO:0000932
GO:0000956
GO:0003674
GO:0003682
GO:0003723
GO:0003729
GO:0005515
GO:0005575
GO:0005634
GO:0005737
GO:0005845
GO:0006397
GO:0006401
GO:0006417
GO:0006807
GO:0008150
GO:0032991
GO:0043170
GO:0044238
GO:1990726
GO:1990904
Participates
as a component of
Lsm1-7 Complex [cytosol] (Saccharomyces cerevisiae)
Inferred From
LSM1 [cytosol]
(Homo sapiens)
Cross References
RefSeq
NP_012411.1
OpenTargets
ENSG00000175324
PRO
P47017
PDB
4M75
,
4C92
,
4C8Q
Interactors (3)
Accession
#Entities
Entities
Confidence Score
Evidence (IntAct)
UniProt:P22147 XRN1
2
XRN1 [nucleoplasm]
(R-SCE-6791205)
XRN1_YEAST [cytosol]
(R-SCE-429980)
0.688
3
UniProt:P53550
1
DCP2 [cytosol]
(R-SCE-429937)
0.564
2
UniProt:P10592
20
SSA2 [cytosol]
(R-SCE-264476)
SSA2 [nucleoplasm]
(R-SCE-5082380)
SSA2 [ficolin-1-rich granule lumen]
(R-SCE-6801512-3)
SSA2 [ficolin-1-rich granule lumen]
(R-SCE-6801496-3)
SSA2 [ficolin-1-rich granule lumen]
(R-SCE-6801494)
SSA2 [extracellular region]
(R-SCE-6805872-3)
SSA2 [extracellular region]
(R-SCE-6806500-3)
SSA2 [extracellular region]
(R-SCE-6805936)
SSA2 [secretory granule lumen]
(R-SCE-6801530)
SSA2 [secretory granule lumen]
(R-SCE-6801472-3)
SSA2 [cytosol]
(R-SCE-3371410-3)
SSA2 [cytosol]
(R-SCE-3371408-3)
SSA2 [cytosol]
(R-SCE-6792602-3)
SSA2 [nucleoplasm]
(R-SCE-6792605-3)
SSA2 [nucleoplasm]
(R-SCE-912480-3)
SSA2 [nucleoplasm]
(R-SCE-5082367-3)
SSA2 [nucleoplasm]
(R-SCE-5252082-3)
SSA2 [nucleoplasm]
(R-SCE-5252088-3)
SSA2 [nucleoplasm]
(R-SCE-5252009-3)
SSA2 [cytosol]
(R-SCE-5251948-3)
0.527
2
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