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XRN1_YEAST [cytosol]
Stable Identifier
R-SCE-429980
Type
Protein [EntityWithAccessionedSequence]
Species
Saccharomyces cerevisiae
Compartment
cytosol
Synonyms
5'-3' exoribonuclease 1, KEM1, KEM1
External Reference Information
External Reference
UniProt:P22147 XRN1
Gene Names
XRN1, DST2, KEM1, RAR5, SEP1, SKI1, YGL173C, G1645
Chain
chain:1-1528
Reference Genes
BioGPS Gene:852702 XRN1
KEGG Gene (Saccharomyces cerevisiae (strain RM11-1a)):YGL173C XRN1
Monarch:852702 XRN1
NCBI Gene:852702 XRN1
Reference Transcript
RefSeq:NM_001181038.1 XRN1
Other Identifiers
1774600_at
5162_at
852702
GO:0000184
GO:0000278
GO:0000741
GO:0000932
GO:0000956
GO:0003674
GO:0003676
GO:0003682
GO:0003723
GO:0003729
GO:0004518
GO:0004527
GO:0004534
GO:0005515
GO:0005575
GO:0005634
GO:0005737
GO:0005829
GO:0005856
GO:0005874
GO:0005886
GO:0006352
GO:0006354
GO:0006364
GO:0006366
GO:0006401
GO:0006413
GO:0006417
GO:0006997
GO:0007089
GO:0008150
GO:0008409
GO:0010494
GO:0016020
GO:0016075
GO:0016078
GO:0016242
GO:0016787
GO:0031370
GO:0032968
GO:0043144
GO:0048284
GO:0048471
GO:0051726
GO:0060261
GO:0061157
GO:0070479
GO:0070651
GO:0090512
GO:0110165
Other forms of this molecule
XRN1 [nucleoplasm]
Cross References
RefSeq
NP_011342.1
OpenTargets
ENSG00000114127
PRO
P22147
PDB
6Q8Y
Interactors (23)
Accession
#Entities
Entities
Confidence Score
Evidence (IntAct)
UniProt:P53235 EIF2A
0.704
6
UniProt:P40089
1
LSM5 [cytosol]
(R-SCE-429839)
0.688
13
UniProt:P57743
1
LSM3 [cytosol]
(R-SCE-429894)
0.688
11
UniProt:Q06406
1
LSM6 [cytosol]
(R-SCE-429936)
0.688
9
UniProt:P47017
1
LSM1 [cytosol]
(R-SCE-429976)
0.688
3
UniProt:P38203
1
LSM2 [cytosol]
(R-SCE-429849)
0.678
8
UniProt:P40070
1
LSM4 [cytosol]
(R-SCE-429956)
0.678
6
UniProt:P25644
1
PAT1 [cytosol]
(R-SCE-2028617)
0.669
6
UniProt:P53883
3
NOP13 [cytosol]
(R-SCE-72591-2)
phospho-NOP13 [cytosol]
(R-SCE-165773-2)
NOP13 [cytosol]
(R-SCE-72589-2)
0.669
5
UniProt:P07260
1
CDC33 [cytosol]
(R-SCE-72578)
0.611
3
UniProt:P33322
1
CBF5 [nucleoplasm]
(R-SCE-163102)
0.611
5
UniProt:P34230
2
ABCD2 [cytosol]
(R-SCE-1456456)
ABCD2 [peroxisomal membrane]
(R-SCE-1456453)
0.573
3
UniProt:P47093 LSM8
0.573
2
UniProt:P53905
1
LSM7 [cytosol]
(R-SCE-2028610)
0.564
4
UniProt:P10080 SSBP1
0.564
8
UniProt:Q12230 LSP1
0.564
12
UniProt:P07703 RPC40
2
RPC5_YEAST [nucleoplasm]
(R-SCE-111824)
RPC40 [nucleoplasm]
(R-SCE-63498)
0.564
3
UniProt:P53550
1
DCP2 [cytosol]
(R-SCE-429937)
0.547
2
UniProt:P23293
4
CDK13 [extracellular region]
(R-SCE-6806442)
CDK13 [ficolin-1-rich granule lumen]
(R-SCE-6801374)
CDK13 [nucleoplasm]
(R-SCE-6797014)
CDK12 [nucleoplasm]
(R-SCE-6797012)
0.534
2
UniProt:P10591
17
SSA1 [ficolin-1-rich granule lumen]
(R-SCE-6801512-2)
SSA1 [ficolin-1-rich granule lumen]
(R-SCE-6801496-2)
SSA1 [extracellular region]
(R-SCE-6805872-2)
SSA1 [extracellular region]
(R-SCE-6806500-2)
SSA1 [secretory granule lumen]
(R-SCE-6801472-2)
SSA1 [cytosol]
(R-SCE-3371410-2)
SSA1 [cytosol]
(R-SCE-3371408-2)
SSA1 [cytosol]
(R-SCE-6792602-2)
SSA1 [nucleoplasm]
(R-SCE-6792605-2)
SSA1 [nucleoplasm]
(R-SCE-912480-2)
SSA1 [nucleoplasm]
(R-SCE-5082367-2)
SSA1 [nucleoplasm]
(R-SCE-5252082-2)
SSA1 [nucleoplasm]
(R-SCE-5252088-2)
SSA1 [nucleoplasm]
(R-SCE-5252009-2)
SSA1 [cytosol]
(R-SCE-5251948-2)
SSA1 [cytosol]
(R-SCE-5251981-2)
SSA1 [cytosol]
(R-SCE-3371521-2)
0.527
2
UniProt:P10592
20
SSA2 [cytosol]
(R-SCE-264476)
SSA2 [ficolin-1-rich granule lumen]
(R-SCE-6801512-3)
SSA2 [ficolin-1-rich granule lumen]
(R-SCE-6801496-3)
SSA2 [ficolin-1-rich granule lumen]
(R-SCE-6801494)
SSA2 [extracellular region]
(R-SCE-6805872-3)
SSA2 [extracellular region]
(R-SCE-6806500-3)
SSA2 [extracellular region]
(R-SCE-6805936)
SSA2 [secretory granule lumen]
(R-SCE-6801530)
SSA2 [secretory granule lumen]
(R-SCE-6801472-3)
SSA2 [cytosol]
(R-SCE-3371410-3)
SSA2 [cytosol]
(R-SCE-3371408-3)
SSA2 [cytosol]
(R-SCE-6792602-3)
SSA2 [nucleoplasm]
(R-SCE-5082380)
SSA2 [nucleoplasm]
(R-SCE-6792605-3)
SSA2 [nucleoplasm]
(R-SCE-912480-3)
SSA2 [nucleoplasm]
(R-SCE-5082367-3)
SSA2 [nucleoplasm]
(R-SCE-5252082-3)
SSA2 [nucleoplasm]
(R-SCE-5252088-3)
SSA2 [nucleoplasm]
(R-SCE-5252009-3)
SSA2 [cytosol]
(R-SCE-5251948-3)
0.527
2
UniProt:P11484
17
HSPA6 [ficolin-1-rich granule lumen]
(R-SCE-6801512-4)
HSPA1A [ficolin-1-rich granule lumen]
(R-SCE-6801496-4)
HSPA1A [extracellular region]
(R-SCE-6805872-4)
HSPA6 [extracellular region]
(R-SCE-6806500-4)
HSPA6 [secretory granule lumen]
(R-SCE-6801472-4)
HSPA1L [cytosol]
(R-SCE-3371410-4)
HSPA2 [cytosol]
(R-SCE-3371408-4)
HSPA1A [cytosol]
(R-SCE-6792602-4)
HSPA1A [nucleoplasm]
(R-SCE-6792605-4)
HSPA2 [nucleoplasm]
(R-SCE-912480-4)
HSPA1L [nucleoplasm]
(R-SCE-5082367-4)
HSPA14 [nucleoplasm]
(R-SCE-5252082-4)
HSPA6 [nucleoplasm]
(R-SCE-5252088-4)
HSPA13 [nucleoplasm]
(R-SCE-5252009-4)
HSPA14 [cytosol]
(R-SCE-5251948-4)
HSPA13 [cytosol]
(R-SCE-5251981-4)
HSPA6 [cytosol]
(R-SCE-3371521-4)
0.527
2
UniProt:P53131 PRP43
0.527
2
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