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CDC48 [nucleoplasm]
Stable Identifier
R-SCE-5643745
Type
Protein [EntityWithAccessionedSequence]
Species
Saccharomyces cerevisiae
Compartment
nucleoplasm
Synonyms
VCP, P25694
Locations in the PathwayBrowser
Expand all
DNA Repair (Saccharomyces cerevisiae)
DNA Damage Bypass (Saccharomyces cerevisiae)
Translesion synthesis by Y family DNA polymerases bypasses lesions on DNA template (Saccharomyces cerevisiae)
Translesion Synthesis by POLH (Saccharomyces cerevisiae)
SPRTN recruits VCP to monoUb:K164-PCNA associated with POLH (Saccharomyces cerevisiae)
NPLOC4:UFD1L:VCP [nucleoplasm] (Saccharomyces cerevisiae)
VCP hexamer [nucleoplasm] (Saccharomyces cerevisiae)
CDC48 [nucleoplasm] (Saccharomyces cerevisiae)
NPLOC4:UFD1L:VCP:SPRTN:POLH:MonoUb:K164-PCNA:RPA:RFC:(TT-CPD:AA-polydNMP)-DNA Template [nucleoplasm] (Saccharomyces cerevisiae)
NPLOC4:UFD1L:VCP [nucleoplasm] (Saccharomyces cerevisiae)
VCP hexamer [nucleoplasm] (Saccharomyces cerevisiae)
CDC48 [nucleoplasm] (Saccharomyces cerevisiae)
SPRTN:VCP-mediated release of POLH from monoUb:K164-PCNA (Saccharomyces cerevisiae)
NPLOC4:UFD1L:VCP:SPRTN:POLH:MonoUb:K164-PCNA:RPA:RFC:(TT-CPD:AA-polydNMP)-DNA Template [nucleoplasm] (Saccharomyces cerevisiae)
NPLOC4:UFD1L:VCP [nucleoplasm] (Saccharomyces cerevisiae)
VCP hexamer [nucleoplasm] (Saccharomyces cerevisiae)
CDC48 [nucleoplasm] (Saccharomyces cerevisiae)
NPLOC4:UFD1L:VPC:SPRTN:MonoUb:K164-PCNA:RPA:RFC:(TT-CPD:AA-polydNMP)-Template DNA [nucleoplasm] (Saccharomyces cerevisiae)
NPLOC4:UFD1L:VCP [nucleoplasm] (Saccharomyces cerevisiae)
VCP hexamer [nucleoplasm] (Saccharomyces cerevisiae)
CDC48 [nucleoplasm] (Saccharomyces cerevisiae)
VCP hexamer [nucleoplasm] (Saccharomyces cerevisiae)
CDC48 [nucleoplasm] (Saccharomyces cerevisiae)
External Reference Information
External Reference
UniProt:P25694
Gene Names
CDC48
Reference Genes
BioGPS Gene:851431 CDC48
ENSEMBL:YDL126C
KEGG Gene (Saccharomyces cerevisiae (strain RM11-1a)):YDL126C CDC48
Monarch:851431 CDC48
NCBI Gene:851431 CDC48
SGD:YDL126C
Reference Transcript
RefSeq:NM_001180185.1 CDC48
Other Identifiers
1777140_at
6604_at
851431
GO:0000278
GO:0000837
GO:0000839
GO:0003674
GO:0005524
GO:0005575
GO:0005634
GO:0005737
GO:0005739
GO:0005740
GO:0005783
GO:0005789
GO:0005829
GO:0006325
GO:0006401
GO:0006470
GO:0007010
GO:0007059
GO:0008150
GO:0012505
GO:0015031
GO:0016020
GO:0016236
GO:0016320
GO:0016570
GO:0016787
GO:0016887
GO:0019888
GO:0030234
GO:0030433
GO:0030970
GO:0031134
GO:0031399
GO:0032182
GO:0033043
GO:0034098
GO:0034517
GO:0034727
GO:0036266
GO:0042221
GO:0042802
GO:0043130
GO:0043161
GO:0043167
GO:0043624
GO:0046034
GO:0048284
GO:0051052
GO:0051228
GO:0051603
GO:0051974
GO:0061025
GO:0070647
GO:0070651
GO:0071629
GO:0071630
GO:0071712
GO:0072671
GO:1900182
GO:1990112
GO:1990116
GO:1990171
GO:2001168
Participates
as a component of
VCP hexamer [nucleoplasm] (Saccharomyces cerevisiae)
Other forms of this molecule
CDC48 [cytosol]
CDC48 [azurophil granule lumen]
CDC48 [extracellular region]
CDC48 [ficolin-1-rich granule lumen]
CDC48 [secretory granule lumen]
CDC48 [cytosol]
Inferred From
VCP [nucleoplasm]
(Homo sapiens)
Cross References
RefSeq
NP_010157.1
PRO
P25694
PDB
6OA9
,
6OPC
,
6OAA
,
6OMB
,
6OAB
Interactors (37)
Accession
#Entities
Entities
Confidence Score
Evidence (IntAct)
UniProt:Q04228
3
UBX2 [cytosol]
(R-SCE-6781921)
UBX2 [extracellular region]
(R-SCE-6806183)
UBX2 [azurophil granule lumen]
(R-SCE-6799138)
0.945
15
UniProt:P53044
2
UFD1 [nucleoplasm]
(R-SCE-5654993)
UFD1 [cytosol]
(R-SCE-9668519)
0.922
19
UniProt:P33755
2
NPL4 [nucleoplasm]
(R-SCE-5654987)
NPL4 [cytosol]
(R-SCE-9755492)
0.908
14
UniProt:P34223 UBX1
0.905
45
UniProt:Q08109
1
HRD1 [endoplasmic reticulum membrane]
(R-SCE-535496)
0.896
9
UniProt:P36037
1
DOA1 [cytosol]
(R-SCE-391304)
0.84
26
UniProt:P54860
1
UFD2 [cytosol]
(R-SCE-976022)
0.832
13
UniProt:Q04311 VMS1
0.793
8
UniProt:P38307
1
DER1 [endoplasmic reticulum membrane]
(R-SCE-5362350)
0.784
5
UniProt:Q06682
2
UBX5 [cytosol]
(R-SCE-9755305)
UBX5 [cytosol]
(R-SCE-8956071)
0.766
6
UniProt:P54730 UBX4
0.761
8
UniProt:Q05787
1
HRD3 [endoplasmic reticulum membrane]
(R-SCE-1911545)
0.723
6
UniProt:P40318 DOA10
0.708
4
UniProt:P38349 UBX7
0.69
6
UniProt:P43558
1
OTU1 [cytosol]
(R-SCE-6781909)
0.678
5
UniProt:Q01477 UBP3
0.632
4
UniProt:Q99220
2
YOS9 [endoplasmic reticulum quality control compartment]
(R-SCE-5362354)
YOS9 [endoplasmic reticulum membrane]
(R-SCE-1022132)
0.623
4
UniProt:P06778
3
RAD52 [nucleoplasm]
(R-SCE-4568909)
RAD52 [nucleoplasm]
(R-SCE-62639)
phospho-RAD52 [nucleoplasm]
(R-SCE-5686588)
0.612
4
UniProt:P41832 BNI1
0.592
3
UniProt:P53741 BRE5
0.591
4
UniProt:P53899 CUZ1
0.573
2
UniProt:P53139 YGK8
0.573
3
UniProt:P04838 UBIQ
0.571
3
UniProt:Q12306
4
SMT3 [nucleoplasm]
(R-SCE-2990831)
SMT3 [nucleoplasm]
(R-SCE-877304)
SMT3 [nucleoplasm]
(R-SCE-3730616)
SMT3 [nucleoplasm]
(R-SCE-3730622)
0.567
3
UniProt:P38987 TEM1
0.564
4
UniProt:P02994
6
TEF1 [cytosol]
(R-SCE-8932212)
TEF1 [cytosol]
(R-SCE-8932419)
TEF1 [secretory granule lumen]
(R-SCE-6801479)
TEF1 [extracellular region]
(R-SCE-6806456)
TEF1 [ficolin-1-rich granule lumen]
(R-SCE-6801528)
TEF1 [cytosol]
(R-SCE-156905)
0.527
2
UniProt:P21771 RT28
0.527
2
UniProt:P53063 DXO
0.527
2
UniProt:Q12743 DFM1
0.527
2
UniProt:Q00816 REG1
0.527
2
UniProt:P10591
2
SSA1 [cytosol]
(R-SCE-3371408-2)
SSA1 [nucleoplasm]
(R-SCE-912480-2)
0.527
2
UniProt:P00729 CBPY
0.527
2
UniProt:P10592
8
SSA2 [cytosol]
(R-SCE-264476)
SSA2 [nucleoplasm]
(R-SCE-5082380)
SSA2 [ficolin-1-rich granule lumen]
(R-SCE-6801494)
SSA2 [extracellular region]
(R-SCE-6805936)
SSA2 [secretory granule lumen]
(R-SCE-6801530)
SSA2 [nucleoplasm]
(R-SCE-912480-3)
SSA2 [cytosol]
(R-SCE-3371408-3)
SSA2 [nucleoplasm]
(R-SCE-8932217)
0.527
2
UniProt:Q12229
3
UBX3 [cytosol]
(R-SCE-6781921-2)
UBX3 [extracellular region]
(R-SCE-6806183-2)
UBX3 [azurophil granule lumen]
(R-SCE-6799138-2)
0.508
3
UniProt:P47049 UBX6
0.508
3
UniProt:Q03714 USA1
0.499
3
UniProt:P32628
2
RAD23 [nucleoplasm]
(R-SCE-62590)
RAD23 [nucleoplasm]
(R-SCE-5688076)
0.499
2
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