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MTR4 [nucleoplasm]
Stable Identifier
R-SCE-6791189
Type
Protein [EntityWithAccessionedSequence]
Species
Saccharomyces cerevisiae
Compartment
nucleoplasm
Synonyms
SKIV2L2, P47047
Locations in the PathwayBrowser
Expand all
Metabolism of RNA (Saccharomyces cerevisiae)
rRNA processing (Saccharomyces cerevisiae)
rRNA processing in the nucleus and cytosol (Saccharomyces cerevisiae)
Major pathway of rRNA processing in the nucleolus and cytosol (Saccharomyces cerevisiae)
21S pre-rRNA is nucleolytically processed at site E (site2a) to yield 18SE pre-rRNA (Saccharomyces cerevisiae)
EXOSC10:C1D:MPHOSPH6:SKIV2L2:Exosome [nucleoplasm] (Saccharomyces cerevisiae)
MTR4 [nucleoplasm] (Saccharomyces cerevisiae)
MTR4 [nucleoplasm] (Saccharomyces cerevisiae)
External Reference Information
External Reference
UniProt:P47047
Gene Names
MTR4
Reference Genes
BioGPS Gene:853397 MTR4
ENSEMBL:YJL050W
KEGG:sce:YJL050W MTR4
Monarch:853397 MTR4
NCBI Gene:853397 MTR4
SGD:YJL050W
UCSC:P47047 MTR4
Reference Transcript
RefSeq:NM_001181483.1 MTR4
Other Identifiers
853397
GO:0000292
GO:0000460
GO:0000467
GO:0003674
GO:0003676
GO:0003723
GO:0003724
GO:0003729
GO:0003824
GO:0004386
GO:0005515
GO:0005524
GO:0005575
GO:0005634
GO:0005730
GO:0006364
GO:0006397
GO:0006401
GO:0008143
GO:0008150
GO:0016075
GO:0016491
GO:0016787
GO:0016887
GO:0031499
GO:0034458
GO:0034475
GO:0034476
GO:0043144
GO:0043167
GO:0043629
GO:0071028
GO:0071031
GO:0071035
GO:0071038
GO:0071042
GO:0071049
GO:0071051
GO:0140657
Participates
as a component of
EXOSC10:C1D:MPHOSPH6:SKIV2L2:Exosome [nucleoplasm] (Saccharomyces cerevisiae)
RBM7:ZCCHC8:SKIV2L2 [nucleoplasm] (Saccharomyces cerevisiae)
This entity regulates
Positively
21S pre-rRNA is nucleolytically processed at site E (site2a) to yield 18SE pre-rRNA
(Saccharomyces cerevisiae)
Inferred From
SKIV2L2 [nucleoplasm]
(Homo sapiens)
Cross References
RefSeq
NP_012485.1
ENSEMBL
YJL050W_mRNA
,
YJL050W
,
YJL050W
PRO
P47047
PDB
7D4I
,
4WFD
,
7AJU
,
6FSZ
,
5OOQ
,
7AJT
,
4QU4
,
6FT6
,
6LQS
,
4U4C
,
2XGJ
Interactors (10)
Accession
#Entities
Entities
Confidence Score
Evidence (IntAct)
UniProt:P53632 PAP2
0.935
28
UniProt:Q12476 AIR2
0.913
26
UniProt:P48561 TRF5
0.847
12
UniProt:P40507 AIR1
0.704
9
UniProt:Q12149
1
RRP6 [nucleoplasm]
(R-SCE-6791547)
0.688
4
UniProt:P25359 RRP43
2
RRP43 [nucleoplasm]
(R-SCE-6791571)
RRP43 [cytosol]
(R-SCE-429912)
0.564
6
UniProt:Q12080 NOP53
0.564
7
UniProt:Q08965 BMS1
2
BMS1 [nucleoplasm]
(R-SCE-6790636)
BMS1 [nucleoplasm]
(R-SCE-6790720)
0.528
3
UniProt:P10592
20
SSA2 [cytosol]
(R-SCE-264476)
SSA2 [ficolin-1-rich granule lumen]
(R-SCE-6801512-3)
SSA2 [ficolin-1-rich granule lumen]
(R-SCE-6801496-3)
SSA2 [ficolin-1-rich granule lumen]
(R-SCE-6801494)
SSA2 [extracellular region]
(R-SCE-6805872-3)
SSA2 [extracellular region]
(R-SCE-6806500-3)
SSA2 [extracellular region]
(R-SCE-6805936)
SSA2 [secretory granule lumen]
(R-SCE-6801530)
SSA2 [secretory granule lumen]
(R-SCE-6801472-3)
SSA2 [cytosol]
(R-SCE-3371410-3)
SSA2 [cytosol]
(R-SCE-3371408-3)
SSA2 [cytosol]
(R-SCE-6792602-3)
SSA2 [nucleoplasm]
(R-SCE-5082380)
SSA2 [nucleoplasm]
(R-SCE-6792605-3)
SSA2 [nucleoplasm]
(R-SCE-912480-3)
SSA2 [nucleoplasm]
(R-SCE-5082367-3)
SSA2 [nucleoplasm]
(R-SCE-5252082-3)
SSA2 [nucleoplasm]
(R-SCE-5252088-3)
SSA2 [nucleoplasm]
(R-SCE-5252009-3)
SSA2 [cytosol]
(R-SCE-5251948-3)
0.527
2
UniProt:P38074
2
HMT1 [cytosol]
(R-SCE-8876692)
HMT1 [nucleoplasm]
(R-SCE-3215140)
0.499
2
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