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SDC1 [plasma membrane]
Stable Identifier
R-SSC-2076666
Type
Protein [EntityWithAccessionedSequence]
Species
Sus scrofa
Compartment
plasma membrane
Synonyms
HS(2)-SDC1, K7GNF5
Locations in the PathwayBrowser
Expand all
Metabolism (Sus scrofa)
Metabolism of carbohydrates (Sus scrofa)
Glycosaminoglycan metabolism (Sus scrofa)
Heparan sulfate/heparin (HS-GAG) metabolism (Sus scrofa)
HS-GAG biosynthesis (Sus scrofa)
Some HSPGs are secreted to the plasma membrane (Sus scrofa)
HSPGs [plasma membrane] (Sus scrofa)
HS(2)-PGs [plasma membrane] (Sus scrofa)
SDC1 [plasma membrane] (Sus scrofa)
Metabolism of vitamins and cofactors (Sus scrofa)
Metabolism of fat-soluble vitamins (Sus scrofa)
Retinoid metabolism and transport (Sus scrofa)
CR:atREs binds apoE and HSPG (Sus scrofa)
CR:atREs:HSPG:apoE [plasma membrane] (Sus scrofa)
HSPGs [plasma membrane] (Sus scrofa)
HS(2)-PGs [plasma membrane] (Sus scrofa)
SDC1 [plasma membrane] (Sus scrofa)
HSPGs [plasma membrane] (Sus scrofa)
HS(2)-PGs [plasma membrane] (Sus scrofa)
SDC1 [plasma membrane] (Sus scrofa)
LRPs transport extracellular CR:atREs:HSPG:apoE to cytosol (Sus scrofa)
CR:atREs:HSPG:apoE [early endosome] (Sus scrofa)
HSPGs [plasma membrane] (Sus scrofa)
HS(2)-PGs [plasma membrane] (Sus scrofa)
SDC1 [plasma membrane] (Sus scrofa)
CR:atREs:HSPG:apoE [plasma membrane] (Sus scrofa)
HSPGs [plasma membrane] (Sus scrofa)
HS(2)-PGs [plasma membrane] (Sus scrofa)
SDC1 [plasma membrane] (Sus scrofa)
Sensory Perception (Sus scrofa)
Visual phototransduction (Sus scrofa)
Retinoid metabolism and transport (Sus scrofa)
CR:atREs binds apoE and HSPG (Sus scrofa)
CR:atREs:HSPG:apoE [plasma membrane] (Sus scrofa)
HSPGs [plasma membrane] (Sus scrofa)
HS(2)-PGs [plasma membrane] (Sus scrofa)
SDC1 [plasma membrane] (Sus scrofa)
HSPGs [plasma membrane] (Sus scrofa)
HS(2)-PGs [plasma membrane] (Sus scrofa)
SDC1 [plasma membrane] (Sus scrofa)
LRPs transport extracellular CR:atREs:HSPG:apoE to cytosol (Sus scrofa)
CR:atREs:HSPG:apoE [early endosome] (Sus scrofa)
HSPGs [plasma membrane] (Sus scrofa)
HS(2)-PGs [plasma membrane] (Sus scrofa)
SDC1 [plasma membrane] (Sus scrofa)
CR:atREs:HSPG:apoE [plasma membrane] (Sus scrofa)
HSPGs [plasma membrane] (Sus scrofa)
HS(2)-PGs [plasma membrane] (Sus scrofa)
SDC1 [plasma membrane] (Sus scrofa)
External Reference Information
External Reference
UniProt:K7GNF5
Gene Names
SDC1
Reference Genes
BioGPS Gene:100519770 SDC1
ENSEMBL:ENSSSCG00000008601.6
KEGG:ssc:100519770 SDC1
Monarch:100519770 SDC1
NCBI Gene:100519770 SDC1
UCSC:K7GNF5 SDC1
Reference Transcript
RefSeq:NM_001243190.1 SDC1
Other Identifiers
100519770
GO:0005576
GO:0005886
GO:0006898
GO:0009897
GO:0009986
GO:0016020
GO:0016192
GO:0023052
GO:0030154
GO:0038024
GO:0042802
GO:0048627
GO:0048856
GO:0055002
GO:0060070
GO:1903543
GO:1903553
Ssc.31172.1.S1_at
Ssc.31172.2.S1_at
Ssc.31172.3.S1_at
Participates
as a member of
HS(2)-PGs [plasma membrane] (Sus scrofa)
Other forms of this molecule
SDC1 [plasma membrane]
SDC1 [plasma membrane]
SDC1 [plasma membrane]
SDC1 [plasma membrane]
SDC1 [plasma membrane]
SDC1 [plasma membrane]
SDC1 [Golgi lumen]
SDC1 [Golgi lumen]
SDC1 [Golgi lumen]
SDC1 [Golgi lumen]
SDC1 [Golgi lumen]
SDC1 [Golgi lumen]
SDC1 [Golgi lumen]
SDC1 [Golgi lumen]
SDC1 [Golgi lumen]
SDC1 [Golgi lumen]
SDC1 [Golgi lumen]
SDC1 [Golgi lumen]
SDC1 [Golgi lumen]
SDC1 [Golgi lumen]
SDC1 [Golgi lumen]
SDC1 [Golgi lumen]
SDC1 [lysosomal lumen]
SDC1 [lysosomal lumen]
Inferred From
HS(2)-SDC1 [plasma membrane]
(Homo sapiens)
Modified Residues
Name
O-xylosyl-L-serine (ChEBI:63653) at unknown position
Modification
beta-D-GlcA-(1->4)-alpha-D-GlcNS-(1->4)-beta-D-IdoA-(1->4)-alpha-D-GlcNS-(1->4)-beta-D-GlcA-(1->3)-beta-D-Gal-(1->3)-beta-D-Gal-(1->4)-beta-D-Xyl-yl group
PsiMod Name
O-xylosyl-L-serine
PsiMod Definition
A protein modification that effectively converts an L-serine residue to O3-xylosylserine.
Cross References
RefSeq
NP_001230119.1
ENSEMBL
ENSSSCT00000033465
,
ENSSSCP00000029408
,
ENSSSCG00000008601
VGNC
92654
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