Reactome | COL1A2 [extracellular region]

COL1A2 [extracellular region]

Stable Identifier

R-SSC-2396166

Type

Protein [EntityWithAccessionedSequence]

Species

Sus scrofa

Compartment

extracellular region

Synonyms

Hydroxyallysyl 3,4-Hyp 5-Hyl collagen alpha-2(I) chain, F1SFA7

Locations in the PathwayBrowser

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Extracellular matrix organization (Sus scrofa)

- Collagen formation (Sus scrofa)
  - Assembly of collagen fibrils and other multimeric structures (Sus scrofa)
    - Crosslinking of collagen fibrils (Sus scrofa)
      - Formation of hydroxyallysine by LOX (Sus scrofa)
        
        Collagen type I fibril with hydroxyallysines [extracellular region] (Sus scrofa)
        
        Tropocollagen type I with or without hydroxyallysines [extracellular region] (Sus scrofa)
        
        Tropocollagen type I with hydroxyallysines [extracellular region] (Sus scrofa)
        
        COL1A2 [extracellular region] (Sus scrofa)
      - Formation of hydroxylysino-5-ketonorleucine cross-links (Sus scrofa)
        
        Collagen type I fibril with hydroxyallysines [extracellular region] (Sus scrofa)
        
        Tropocollagen type I with or without hydroxyallysines [extracellular region] (Sus scrofa)
        
        Tropocollagen type I with hydroxyallysines [extracellular region] (Sus scrofa)
        
        COL1A2 [extracellular region] (Sus scrofa)
      - Formation of lysino-5-ketonorleucine cross-links (Sus scrofa)
        
        Collagen type I fibril with hydroxyallysines [extracellular region] (Sus scrofa)
        
        Tropocollagen type I with or without hydroxyallysines [extracellular region] (Sus scrofa)
        
        Tropocollagen type I with hydroxyallysines [extracellular region] (Sus scrofa)
        
        COL1A2 [extracellular region] (Sus scrofa)

External Reference Information

External Reference

UniProt:F1SFA7

Gene Names

COL1A2

Reference Genes

ENSEMBL:ENSSSCG00000015326

ENSEMBL:ENSSSCG00000015326.5 COL1A2

Other Identifiers

100626716

GO:0005198

GO:0005201

Ssc.21011.1.S1_at

Ssc.24975.1.S1_at

Participates

as a component of

Tropocollagen type I with hydroxyallysines [extracellular region] (Sus scrofa)

Other forms of this molecule

COL1A2 [endoplasmic reticulum lumen]

COL1A2 [extracellular region]

COL1A2 [endoplasmic reticulum lumen]

COL1A2 [extracellular region]

Inferred From

Hydroxyallysyl collagen alpha-2(I) chains [extracellular region] (Homo sapiens)

Hydroxyallysyl 3,4-Hyp 5-Hyl collagen alpha-2(I) chain [extracellular region] (Homo sapiens)

Modified Residues

Name

(2S,4R)-4-hydroxyproline at unknown position

PsiMod Name

(2S,4R)-4-hydroxyproline

PsiMod Definition

A protein modification that effectively converts an L-proline residue to 4-hydroxy-L-proline

Name

(2S,4R)-4-hydroxyproline at unknown position

PsiMod Name

(2S,4R)-4-hydroxyproline

PsiMod Definition

A protein modification that effectively converts an L-proline residue to 4-hydroxy-L-proline

Name

(2S,4R)-4-hydroxyproline at unknown position

PsiMod Name

(2S,4R)-4-hydroxyproline

PsiMod Definition

A protein modification that effectively converts an L-proline residue to 4-hydroxy-L-proline

Name

(2S,3S)-3-hydroxyproline at unknown position

PsiMod Name

(2S,3S)-3-hydroxyproline

PsiMod Definition

A protein modification that effectively converts an L-proline residue to 3-hydroxy-L-proline.

Name

(2S,5R)-5-hydroxylysine at unknown position

PsiMod Name

(2S,5R)-5-hydroxylysine

PsiMod Definition

A protein modification that effectively converts an L-lysine residue to 5-hydroxy-L-lysine.

Name

(2S,5R)-5-hydroxylysine (erythro-L-hydroxyallysine) at unknown position

Modification

erythro-L-hydroxyallysine

PsiMod Name

(2S,5R)-5-hydroxylysine

PsiMod Definition

A protein modification that effectively converts an L-lysine residue to 5-hydroxy-L-lysine.

Cross References

OpenTargets

ENSG00000164692

Ensembl

ENSSSCP00000016253, ENSSSCG00000015326, ENSSSCP00000019885, ENSSSCT00000016699, ENSSSCT00000024528

VGNC

86871

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