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TCEA1 [nucleoplasm]
Stable Identifier
R-SSC-65748
Type
Protein [EntityWithAccessionedSequence]
Species
Sus scrofa
Compartment
nucleoplasm
Synonyms
TCEA1, A0A5G2RGF7
Locations in the PathwayBrowser
Expand all
DNA Repair (Sus scrofa)
Nucleotide Excision Repair (Sus scrofa)
Transcription-Coupled Nucleotide Excision Repair (TC-NER) (Sus scrofa)
Dual incision in TC-NER (Sus scrofa)
5' incision of damaged DNA strand by ERCC1:ERCC4 in TC-NER (Sus scrofa)
TC-NER incision complex [nucleoplasm] (Sus scrofa)
TC-NER pre-incision complex:Open bubble damaged DNA template:RPA:ERCC5:trimmed nascent mRNA [nucleoplasm] (Sus scrofa)
TC-NER pre-incision complex:Open bubble damaged DNA template:trimmed nascent mRNA [nucleoplasm] (Sus scrofa)
TCEA1 [nucleoplasm] (Sus scrofa)
TC-NER incision complex:5'-incised damaged DNA:trimmed nascent mRNA [nucleoplasm] (Sus scrofa)
TCEA1 [nucleoplasm] (Sus scrofa)
DNA polymerases delta, epsilon or kappa bind the TC-NER site (Sus scrofa)
TC-NER incision complex: 5'-incised damaged DNA:trimmed nascent mRNA:(PCNA:POLD,POLE), (MonoUb:K164-PCNA:POLK):RPA:RFC [nucleoplasm] (Sus scrofa)
TCEA1 [nucleoplasm] (Sus scrofa)
TC-NER incision complex:5'-incised damaged DNA:trimmed nascent mRNA [nucleoplasm] (Sus scrofa)
TCEA1 [nucleoplasm] (Sus scrofa)
ERCC2-facilitated RNA Pol II backtracking in TC-NER (Sus scrofa)
TC-NER pre-incision complex [nucleoplasm] (Sus scrofa)
TCEA1 [nucleoplasm] (Sus scrofa)
TC-NER pre-incision complex:Partially open bubble damaged DNA template:trimmed nascent mRNA [nucleoplasm] (Sus scrofa)
TCEA1 [nucleoplasm] (Sus scrofa)
ERCC3-facilitated RNA Pol II backtracking in TC-NER (Sus scrofa)
TC-NER pre-incision complex:Open bubble damaged DNA template:trimmed nascent mRNA [nucleoplasm] (Sus scrofa)
TCEA1 [nucleoplasm] (Sus scrofa)
TC-NER pre-incision complex:Partially open bubble damaged DNA template:trimmed nascent mRNA [nucleoplasm] (Sus scrofa)
TCEA1 [nucleoplasm] (Sus scrofa)
ERCC5 and RPA bind TC-NER site (Sus scrofa)
TC-NER pre-incision complex:Open bubble damaged DNA template:RPA:ERCC5:trimmed nascent mRNA [nucleoplasm] (Sus scrofa)
TC-NER pre-incision complex:Open bubble damaged DNA template:trimmed nascent mRNA [nucleoplasm] (Sus scrofa)
TCEA1 [nucleoplasm] (Sus scrofa)
TC-NER pre-incision complex:Open bubble damaged DNA template:trimmed nascent mRNA [nucleoplasm] (Sus scrofa)
TCEA1 [nucleoplasm] (Sus scrofa)
Formation of TC-NER Pre-Incision Complex (Sus scrofa)
Assembly of the pre-incision complex in TC-NER (Sus scrofa)
TCEA1 [nucleoplasm] (Sus scrofa)
Ubiquitinated,hyperphosphorylated RNA Pol II:Damaged DNA template:nascent mRNA hybrid:TFIIH:Ub:ERCC6:ERCC8:DDB1:CUL4:RBX1:UVSSA:USP7:XAB2 complex:XPA:TCEA1:HMGN1:EP300 [nucleoplasm] (Sus scrofa)
TCEA1 [nucleoplasm] (Sus scrofa)
UVSSA:USP7 deubiquitinates ERCC6 (Sus scrofa)
TC-NER pre-incision complex [nucleoplasm] (Sus scrofa)
TCEA1 [nucleoplasm] (Sus scrofa)
Ubiquitinated,hyperphosphorylated RNA Pol II:Damaged DNA template:nascent mRNA hybrid:TFIIH:Ub:ERCC6:ERCC8:DDB1:CUL4:RBX1:UVSSA:USP7:XAB2 complex:XPA:TCEA1:HMGN1:EP300 [nucleoplasm] (Sus scrofa)
TCEA1 [nucleoplasm] (Sus scrofa)
Gap-filling DNA repair synthesis and ligation in TC-NER (Sus scrofa)
Ligation of newly synthesized repair patch to incised DNA in TC-NER (Sus scrofa)
TC-NER post-incision complex:SSB-dsDNA:trimmed nascent mRNA: (PCNA:POLD,POLE), (MonoUb:K164-PCNA:POLK):RPA:RFC [nucleoplasm] (Sus scrofa)
TCEA1 [nucleoplasm] (Sus scrofa)
TC-NER post-incision complex:dsDNA with transcription bubble [nucleoplasm] (Sus scrofa)
TCEA1 [nucleoplasm] (Sus scrofa)
Repair DNA synthesis of ~27-30 bases long patch by POLD, POLE or POLK in TC-NER (Sus scrofa)
TC-NER post-incision complex:SSB-dsDNA:trimmed nascent mRNA: (PCNA:POLD,POLE), (MonoUb:K164-PCNA:POLK):RPA:RFC [nucleoplasm] (Sus scrofa)
TCEA1 [nucleoplasm] (Sus scrofa)
TC-NER post-incision complex:incised DNA without lesion:trimmed nascent mRNA:PCNA:(PCNA:POLD,POLE),(MonoUb:K164-PCNA:POLK):RPA:RFC [nucleoplasm] (Sus scrofa)
TCEA1 [nucleoplasm] (Sus scrofa)
Gene expression (Transcription) (Sus scrofa)
RNA Polymerase II Transcription (Sus scrofa)
Generic Transcription Pathway (Sus scrofa)
Transcriptional Regulation by TP53 (Sus scrofa)
TP53 Regulates Transcription of DNA Repair Genes (Sus scrofa)
CCNK:CDK12 binds RNA Pol II at DNA repair genes (Sus scrofa)
CCNK:CDK12:Elongation Complex at DNA Repair Genes [nucleoplasm] (Sus scrofa)
Elongation Complex at DNA Repair Genes [nucleoplasm] (Sus scrofa)
TCEA1 [nucleoplasm] (Sus scrofa)
Elongation Complex at DNA Repair Genes [nucleoplasm] (Sus scrofa)
TCEA1 [nucleoplasm] (Sus scrofa)
CDK12 phosphorylates RNA Pol II CTD at DNA repair genes (Sus scrofa)
CCNK:CDK12:CDK12-Phosphorylated Elongation Complex at DNA repair genes [nucleoplasm] (Sus scrofa)
CDK12-Phosphorylated Elongation Complex [nucleoplasm] (Sus scrofa)
TCEA1 [nucleoplasm] (Sus scrofa)
CCNK:CDK12:Elongation Complex at DNA Repair Genes [nucleoplasm] (Sus scrofa)
Elongation Complex at DNA Repair Genes [nucleoplasm] (Sus scrofa)
TCEA1 [nucleoplasm] (Sus scrofa)
RNA Polymerase II Pre-transcription Events (Sus scrofa)
2-4 nt.backtracking of Pol II complex on the template leading to elongation pausing (Sus scrofa)
Paused processive elongation complex [nucleoplasm] (Sus scrofa)
TCEA1 [nucleoplasm] (Sus scrofa)
Processive elongation complex [nucleoplasm] (Sus scrofa)
TCEA1 [nucleoplasm] (Sus scrofa)
7-14 nt. Backtracking of Pol II complex on the template leading to elongation arrest (Sus scrofa)
Processive elongation complex [nucleoplasm] (Sus scrofa)
TCEA1 [nucleoplasm] (Sus scrofa)
Abortive termination of elongation after arrest (Sus scrofa)
Aborted elongation complex after arrest [nucleoplasm] (Sus scrofa)
TCEA1 [nucleoplasm] (Sus scrofa)
Processive elongation complex [nucleoplasm] (Sus scrofa)
TCEA1 [nucleoplasm] (Sus scrofa)
Elongating transcript encounters a lesion in the template (Sus scrofa)
Processive elongation complex [nucleoplasm] (Sus scrofa)
TCEA1 [nucleoplasm] (Sus scrofa)
TCEA1 [nucleoplasm] (Sus scrofa)
Resumption of elongation after recovery from pausing (Sus scrofa)
Paused processive elongation complex [nucleoplasm] (Sus scrofa)
TCEA1 [nucleoplasm] (Sus scrofa)
Processive elongation complex [nucleoplasm] (Sus scrofa)
TCEA1 [nucleoplasm] (Sus scrofa)
TFIIS-mediated recovery of elongation from arrest (Sus scrofa)
Processive elongation complex [nucleoplasm] (Sus scrofa)
TCEA1 [nucleoplasm] (Sus scrofa)
RNA Polymerase II Transcription Elongation (Sus scrofa)
Addition of nucleotides leads to transcript elongation (Sus scrofa)
Elongation complex [nucleoplasm] (Sus scrofa)
TCEA1 [nucleoplasm] (Sus scrofa)
Processive elongation complex [nucleoplasm] (Sus scrofa)
TCEA1 [nucleoplasm] (Sus scrofa)
Formation of RNA Pol II elongation complex (Sus scrofa)
Recruitment of elongation factors to form elongation complex (Sus scrofa)
Elongation complex [nucleoplasm] (Sus scrofa)
TCEA1 [nucleoplasm] (Sus scrofa)
TCEA1 [nucleoplasm] (Sus scrofa)
Pol II elongation complex moves on the template as transcript elongates (Sus scrofa)
Elongation complex prior to separation [nucleoplasm] (Sus scrofa)
TCEA1 [nucleoplasm] (Sus scrofa)
Processive elongation complex [nucleoplasm] (Sus scrofa)
TCEA1 [nucleoplasm] (Sus scrofa)
Separation of elongating transcript from template (Sus scrofa)
Elongation complex prior to separation [nucleoplasm] (Sus scrofa)
TCEA1 [nucleoplasm] (Sus scrofa)
Elongation complex with separated and uncleaved transcript [nucleoplasm] (Sus scrofa)
TCEA1 [nucleoplasm] (Sus scrofa)
External Reference Information
External Reference
UniProt:A0A5G2RGF7
Gene Names
TCEA1
Reference Genes
ENSEMBL:ENSSSCG00000006261
ENSEMBL:ENSSSCG00000006261.4 TCEA1
Other Identifiers
GO:0003676
GO:0003677
GO:0005622
GO:0005634
GO:0006351
GO:0006368
GO:0008270
GO:0043226
GO:0046872
Ssc.25181.1.S1_at
Participates
as an output of
Elongating transcript encounters a lesion in the template (Sus scrofa)
as a component of
Aborted elongation complex after arrest [nucleoplasm] (Sus scrofa)
Paused processive elongation complex [nucleoplasm] (Sus scrofa)
Elongation complex with separated and uncleaved transcript [nucleoplasm] (Sus scrofa)
Elongation complex prior to separation [nucleoplasm] (Sus scrofa)
Processive elongation complex [nucleoplasm] (Sus scrofa)
Elongation complex [nucleoplasm] (Sus scrofa)
TC-NER post-incision complex:dsDNA with transcription bubble [nucleoplasm] (Sus scrofa)
TC-NER post-incision complex:SSB-dsDNA:trimmed nascent mRNA: (PCNA:POLD,POLE), (MonoUb:K164-PCNA:POLK):RPA:RFC [nucleoplasm] (Sus scrofa)
TC-NER post-incision complex:incised DNA without lesion:trimmed nascent mRNA:PCNA:(PCNA:POLD,POLE),(MonoUb:K164-PCNA:POLK):RPA:RFC [nucleoplasm] (Sus scrofa)
TC-NER incision complex: 5'-incised damaged DNA:trimmed nascent mRNA:(PCNA:POLD,POLE), (MonoUb:K164-PCNA:POLK):RPA:RFC [nucleoplasm] (Sus scrofa)
TC-NER incision complex:5'-incised damaged DNA:trimmed nascent mRNA [nucleoplasm] (Sus scrofa)
TC-NER pre-incision complex:Open bubble damaged DNA template:trimmed nascent mRNA [nucleoplasm] (Sus scrofa)
TC-NER pre-incision complex:Partially open bubble damaged DNA template:trimmed nascent mRNA [nucleoplasm] (Sus scrofa)
TC-NER pre-incision complex [nucleoplasm] (Sus scrofa)
Ubiquitinated,hyperphosphorylated RNA Pol II:Damaged DNA template:nascent mRNA hybrid:TFIIH:Ub:ERCC6:ERCC8:DDB1:CUL4:RBX1:UVSSA:USP7:XAB2 complex:XPA:TCEA1:HMGN1:EP300 [nucleoplasm] (Sus scrofa)
CDK12-Phosphorylated Elongation Complex [nucleoplasm] (Sus scrofa)
Elongation Complex at DNA Repair Genes [nucleoplasm] (Sus scrofa)
as an input of
Recruitment of elongation factors to form elongation complex (Sus scrofa)
Assembly of the pre-incision complex in TC-NER (Sus scrofa)
Inferred From
TCEA1 [nucleoplasm]
(Homo sapiens)
Cross References
OpenTargets
ENSG00000187735
Ensembl
ENSSSCT00000069629
,
ENSSSCP00000074078
,
ENSSSCG00000006261
VGNC
93811
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