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PRPF40A [nucleoplasm]
Stable Identifier
R-SSC-8867890
Type
Protein [EntityWithAccessionedSequence]
Species
Sus scrofa
Compartment
nucleoplasm
Synonyms
PRPF40A, A0A287BHV8
Locations in the PathwayBrowser
Expand all
Metabolism of RNA (Sus scrofa)
Processing of Capped Intron-Containing Pre-mRNA (Sus scrofa)
mRNA 3'-end processing (Sus scrofa)
mRNA Polyadenylation (Sus scrofa)
Core CPA complex binds capped pre-mRNA (Sus scrofa)
Core CPA complex:Spliceosomal A complex (uncleaved pre-mRNA) [nucleoplasm] (Sus scrofa)
Spliceosomal A complex (capped, methylated pre-mRNA) [nucleoplasm] (Sus scrofa)
PRPF40A [nucleoplasm] (Sus scrofa)
Spliceosomal A complex (capped, methylated pre-mRNA) [nucleoplasm] (Sus scrofa)
PRPF40A [nucleoplasm] (Sus scrofa)
PABPN1-stimulated PAPOL synthesizes polyA tail at distal 3'UTR PAS (Sus scrofa)
Ub-K63-CPA:PABPN1:Spliceosomal A complex (pre-mRNA polyadenylated at distal 3'UTR PAS) [nucleoplasm] (Sus scrofa)
Spliceosomal A complex (pre-mRNA polyadenylated at distal 3'UTR PAS) [nucleoplasm] (Sus scrofa)
PRPF40A [nucleoplasm] (Sus scrofa)
Ub-K63-CPA:Spliceosomal A complex (pre-mRNA cleaved at distal 3'UTR PAS) [nucleoplasm] (Sus scrofa)
Spliceosomal A complex (pre-mRNA cleaved at distal 3'UTR PAS) [nucleoplasm] (Sus scrofa)
PRPF40A [nucleoplasm] (Sus scrofa)
PABPN1-stimulated PAPOL synthesizes polyA tail at intronic PAS (Sus scrofa)
Ub-K63-CPA:PABPN1:Spliceosomal A complex (pre-mRNA polyadenylated at intronic PAS) [nucleoplasm] (Sus scrofa)
Spliceosomal A complex (pre-mRNA polyadenylated at intronic PAS) [nucleoplasm] (Sus scrofa)
PRPF40A [nucleoplasm] (Sus scrofa)
Ub-K63-CPA:Spliceosomal A complex (pre-mRNA cleaved at intronic PAS) [nucleoplasm] (Sus scrofa)
Spliceosomal A complex (pre-mRNA cleaved at intronal PAS) [nucleoplasm] (Sus scrofa)
PRPF40A [nucleoplasm] (Sus scrofa)
PABPN1-stimulated PAPOL synthesizes polyA tail at proximal 3'UTR PAS (Sus scrofa)
Ub-K63-CPA:PABPN1:Spliceosomal A complex (pre-mRNA polyadenylated at proximal 3'UTR PAS) [nucleoplasm] (Sus scrofa)
Spliceosomal A complex (pre-mRNA polyadenylated at proximal 3'UTR PAS) [nucleoplasm] (Sus scrofa)
PRPF40A [nucleoplasm] (Sus scrofa)
Ub-K63-CPA:Spliceosomal A complex (pre-mRNA cleaved at proximal 3'UTR PAS) [nucleoplasm] (Sus scrofa)
Spliceosomal A complex (pre-mRNA cleaved at proximal 3'UTR PAS) [nucleoplasm] (Sus scrofa)
PRPF40A [nucleoplasm] (Sus scrofa)
PP1 dephosphorylates RNA Pol II (Sus scrofa)
CPA:Spliceosomal A complex (uncleaved pre-mRNA) [nucleoplasm] (Sus scrofa)
Spliceosomal A complex (capped, methylated pre-mRNA) [nucleoplasm] (Sus scrofa)
PRPF40A [nucleoplasm] (Sus scrofa)
CPA:Spliceosomal A complex (uncleaved pre-mRNA, RNA Pol II Ser5 dephosphorylated) [nucleoplasm] (Sus scrofa)
Spliceosomal A complex (RNA Pol II Ser5 dephosphorylated) [nucleoplasm] (Sus scrofa)
PRPF40A [nucleoplasm] (Sus scrofa)
RBBP6 activates CPSF complex (Sus scrofa)
CPA:Spliceosomal A complex (uncleaved pre-mRNA, RNA Pol II Ser5 dephosphorylated) [nucleoplasm] (Sus scrofa)
Spliceosomal A complex (RNA Pol II Ser5 dephosphorylated) [nucleoplasm] (Sus scrofa)
PRPF40A [nucleoplasm] (Sus scrofa)
Ub-K63-CPA:Spliceosomal A complex (uncleaved pre-mRNA, RNA Pol II Ser2 dephosphorylated) [nucleoplasm] (Sus scrofa)
Spliceosomal A complex (RNA Pol II Ser5 dephosphorylated) [nucleoplasm] (Sus scrofa)
PRPF40A [nucleoplasm] (Sus scrofa)
mRNA Splicing (Sus scrofa)
mRNA Splicing - Major Pathway (Sus scrofa)
Formation of the Spliceosomal E complex (Sus scrofa)
PRPF40A [nucleoplasm] (Sus scrofa)
Spliceosomal E complex [nucleoplasm] (Sus scrofa)
PRPF40A [nucleoplasm] (Sus scrofa)
External Reference Information
External Reference
UniProt:A0A287BHV8
Gene Names
PRPF40A
Reference Genes
BioGPS Gene:100157937 PRPF40A
ENSEMBL:ENSSSCG00000015867.5
Monarch:100157937 PRPF40A
NCBI Gene:100157937 PRPF40A
UCSC:A0A287BHV8 PRPF40A
Reference Transcript
RefSeq:XM_013984129.1 PRPF40A
Other Identifiers
100157937
GO:0000398
GO:0003723
GO:0005515
GO:0005634
GO:0005685
GO:0006397
GO:0008380
GO:0016020
GO:0016071
GO:0016363
GO:0016607
GO:0045292
GO:0071004
Ssc.30217.1.A1_at
Ssc.6297.1.S1_at
Participates
as a component of
Spliceosomal A complex (pre-mRNA cleaved at intronal PAS) [nucleoplasm] (Sus scrofa)
Spliceosomal A complex (pre-mRNA polyadenylated at intronic PAS) [nucleoplasm] (Sus scrofa)
Spliceosomal A complex (pre-mRNA cleaved at proximal 3'UTR PAS) [nucleoplasm] (Sus scrofa)
Spliceosomal A complex (pre-mRNA polyadenylated at proximal 3'UTR PAS) [nucleoplasm] (Sus scrofa)
Spliceosomal A complex (RNA Pol II Ser5 dephosphorylated) [nucleoplasm] (Sus scrofa)
Spliceosomal A complex (pre-mRNA cleaved at distal 3'UTR PAS) [nucleoplasm] (Sus scrofa)
Spliceosomal A complex (pre-mRNA polyadenylated at distal 3'UTR PAS) [nucleoplasm] (Sus scrofa)
Spliceosomal A complex (capped, methylated pre-mRNA) [nucleoplasm] (Sus scrofa)
Spliceosomal E complex [nucleoplasm] (Sus scrofa)
Spliceosomal A complex (capped, methylated, polyadenylated pre-mRNA) [nucleoplasm] (Sus scrofa)
Spliceosomal Pre-B complex [nucleoplasm] (Sus scrofa)
as an input of
Formation of the Spliceosomal E complex (Sus scrofa)
Inferred From
PRPF40A [nucleoplasm]
(Homo sapiens)
Cross References
RefSeq
XP_013839583.1
ENSEMBL
ENSSSCT00000049118
,
ENSSSCG00000015867
,
ENSSSCP00000055947
VGNC
98222
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