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ncbp1 [cytosol]
Stable Identifier
R-XTR-162459
Type
Protein [EntityWithAccessionedSequence]
Species
Xenopus tropicalis
Compartment
cytosol
Synonyms
NCBP1, Q6DIE2
Locations in the PathwayBrowser
Expand all
Metabolism of RNA (Xenopus tropicalis)
Nonsense-Mediated Decay (NMD) (Xenopus tropicalis)
Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC) (Xenopus tropicalis)
Decay of mRNA in SMG6:SMG5:SMG7:mRNA complex (Xenopus tropicalis)
Cap Binding Complex (CBC) [cytosol] (Xenopus tropicalis)
ncbp1 [cytosol] (Xenopus tropicalis)
mRNA Cleaved by SMG6 [cytosol] (Xenopus tropicalis)
Cap Binding Complex (CBC) [cytosol] (Xenopus tropicalis)
ncbp1 [cytosol] (Xenopus tropicalis)
SMG1 phosphorylates UPF1 (enhanced by Exon Junction Complex) (Xenopus tropicalis)
SMG1:Phosphorylated UPF1:EJC:Translated mRNP [cytosol] (Xenopus tropicalis)
Translated mRNA Complex with Premature Termination Codon Preceding Exon Junction [cytosol] (Xenopus tropicalis)
mRNA Complex with a Premature Termination Codon Preceding an Exon Junction [cytosol] (Xenopus tropicalis)
Cap Binding Complex (CBC) [cytosol] (Xenopus tropicalis)
ncbp1 [cytosol] (Xenopus tropicalis)
SMG1:UPF1:EJC:Translated mRNP [cytosol] (Xenopus tropicalis)
Translated mRNA Complex with Premature Termination Codon Preceding Exon Junction [cytosol] (Xenopus tropicalis)
mRNA Complex with a Premature Termination Codon Preceding an Exon Junction [cytosol] (Xenopus tropicalis)
Cap Binding Complex (CBC) [cytosol] (Xenopus tropicalis)
ncbp1 [cytosol] (Xenopus tropicalis)
SMG6 hydrolyzes mRNA with premature termination codon (Xenopus tropicalis)
Phosphorylated UPF1:SMG5:SMG7:SMG6:PP2A:Translated mRNP [cytosol] (Xenopus tropicalis)
Translated mRNA Complex with Premature Termination Codon Preceding Exon Junction [cytosol] (Xenopus tropicalis)
mRNA Complex with a Premature Termination Codon Preceding an Exon Junction [cytosol] (Xenopus tropicalis)
Cap Binding Complex (CBC) [cytosol] (Xenopus tropicalis)
ncbp1 [cytosol] (Xenopus tropicalis)
mRNA Cleaved by SMG6 [cytosol] (Xenopus tropicalis)
Cap Binding Complex (CBC) [cytosol] (Xenopus tropicalis)
ncbp1 [cytosol] (Xenopus tropicalis)
UPF1 binds an mRNP with a termination codon preceding an Exon Junction Complex (Xenopus tropicalis)
SMG1:UPF1:EJC:Translated mRNP [cytosol] (Xenopus tropicalis)
Translated mRNA Complex with Premature Termination Codon Preceding Exon Junction [cytosol] (Xenopus tropicalis)
mRNA Complex with a Premature Termination Codon Preceding an Exon Junction [cytosol] (Xenopus tropicalis)
Cap Binding Complex (CBC) [cytosol] (Xenopus tropicalis)
ncbp1 [cytosol] (Xenopus tropicalis)
Translated mRNA Complex with Premature Termination Codon Preceding Exon Junction [cytosol] (Xenopus tropicalis)
mRNA Complex with a Premature Termination Codon Preceding an Exon Junction [cytosol] (Xenopus tropicalis)
Cap Binding Complex (CBC) [cytosol] (Xenopus tropicalis)
ncbp1 [cytosol] (Xenopus tropicalis)
p-4S-UPF1 recruits SMG5, SMG7, SMG6, PNRC2, DCP1A, and PP2A (Xenopus tropicalis)
Phosphorylated UPF1:SMG5:SMG7:SMG6:PP2A:Translated mRNP [cytosol] (Xenopus tropicalis)
Translated mRNA Complex with Premature Termination Codon Preceding Exon Junction [cytosol] (Xenopus tropicalis)
mRNA Complex with a Premature Termination Codon Preceding an Exon Junction [cytosol] (Xenopus tropicalis)
Cap Binding Complex (CBC) [cytosol] (Xenopus tropicalis)
ncbp1 [cytosol] (Xenopus tropicalis)
SMG1:Phosphorylated UPF1:EJC:Translated mRNP [cytosol] (Xenopus tropicalis)
Translated mRNA Complex with Premature Termination Codon Preceding Exon Junction [cytosol] (Xenopus tropicalis)
mRNA Complex with a Premature Termination Codon Preceding an Exon Junction [cytosol] (Xenopus tropicalis)
Cap Binding Complex (CBC) [cytosol] (Xenopus tropicalis)
ncbp1 [cytosol] (Xenopus tropicalis)
Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC) (Xenopus tropicalis)
Formation of UPF1:eRF3 complex on mRNA with a premature termination codon and no Exon Junction Complex (Xenopus tropicalis)
Translated mRNA Complex with Premature Termination Codon Not Preceding Exon Junction [cytosol] (Xenopus tropicalis)
mRNA Complex with a Premature Termination Codon Not Preceding an Exon Junction [cytosol] (Xenopus tropicalis)
Cap Binding Complex (CBC) [cytosol] (Xenopus tropicalis)
ncbp1 [cytosol] (Xenopus tropicalis)
UPF1:eRF3 Complex on Translated mRNA [cytosol] (Xenopus tropicalis)
Translated mRNA Complex with Premature Termination Codon Not Preceding Exon Junction [cytosol] (Xenopus tropicalis)
mRNA Complex with a Premature Termination Codon Not Preceding an Exon Junction [cytosol] (Xenopus tropicalis)
Cap Binding Complex (CBC) [cytosol] (Xenopus tropicalis)
ncbp1 [cytosol] (Xenopus tropicalis)
External Reference Information
External Reference
UniProt:Q6DIE2
Gene Names
ncbp1
Reference Genes
BioGPS Gene:448484 ncbp1
ENSEMBL:ENSXETG00000010179
KEGG Gene (Xenopus tropicalis):448484 ncbp1
Monarch:448484 ncbp1
NCBI Gene:448484 ncbp1
Reference Transcript
RefSeq:NM_001006787.1 ncbp1
Other Identifiers
448484
GO:0000184
GO:0000339
GO:0003723
GO:0005515
GO:0005634
GO:0005737
GO:0005845
GO:0005846
GO:0006370
GO:0006397
GO:0006406
GO:0006417
GO:0006446
GO:0006913
GO:0008380
GO:0016070
GO:0016071
GO:0031047
GO:0031442
GO:0043226
GO:0051028
Participates
as a component of
Cap Binding Complex (CBC) [cytosol] (Xenopus tropicalis)
Other forms of this molecule
ncbp1 [nucleoplasm]
Inferred From
NCBP1 [cytosol]
(Homo sapiens)
Cross References
RefSeq
NP_001006788.1
Xenbase
XB-GENE-5841194
Ensembl
ENSXETP00000022452
,
ENSXETT00000022452
,
ENSXETG00000010179
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