Reactome | LOC100497990 [endoplasmic reticulum lumen]

LOC100497990 [endoplasmic reticulum lumen]

Stable Identifier

R-XTR-2022475

Type

Protein [EntityWithAccessionedSequence]

Species

Xenopus tropicalis

Compartment

endoplasmic reticulum lumen

Synonyms

3x4Hyp-3Hyp-COL5A3, A0A803J8Y6

Locations in the PathwayBrowser

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External Reference Information

External Reference

UniProt:A0A803J8Y6

Gene Names

LOC100497990

Reference Genes

BioGPS Gene:100497990 LOC100497990

ENSEMBL:ENSXETG00000011757

Monarch:100497990 LOC100497990

NCBI Gene:100497990 LOC100497990

Reference Transcript

RefSeq:XM_012953005.3 LOC100497990

Other Identifiers

100497990

GO:0005198

GO:0005201

GO:0005581

Participates

as a candidate of

3,4-Hyp collagen propeptides [endoplasmic reticulum lumen] (Xenopus tropicalis)

Other forms of this molecule

LOC100497990 [endoplasmic reticulum lumen]

LOC100497990 [extracellular region]

Inferred From

3x4Hyp-3Hyp-COL5A3 [endoplasmic reticulum lumen] (Homo sapiens)

Modified Residues

Name

(2S,4R)-4-hydroxyproline at unknown position

PsiMod Name

(2S,4R)-4-hydroxyproline

PsiMod Definition

A protein modification that effectively converts an L-proline residue to 4-hydroxy-L-proline

Name

(2S,4R)-4-hydroxyproline at unknown position

PsiMod Name

(2S,4R)-4-hydroxyproline

PsiMod Definition

A protein modification that effectively converts an L-proline residue to 4-hydroxy-L-proline

Name

(2S,4R)-4-hydroxyproline at unknown position

PsiMod Name

(2S,4R)-4-hydroxyproline

PsiMod Definition

A protein modification that effectively converts an L-proline residue to 4-hydroxy-L-proline

Name

(2S,3S)-3-hydroxyproline at unknown position

PsiMod Name

(2S,3S)-3-hydroxyproline

PsiMod Definition

A protein modification that effectively converts an L-proline residue to 3-hydroxy-L-proline.

Cross References

RefSeq

XP_012808459.1

Ensembl

ENSXETP00000104288, ENSXETT00000110591, ENSXETG00000011757

Xenbase

XB-GENE-29083971

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