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lum [Golgi lumen]
Stable Identifier
R-XTR-2046248
Type
Protein [EntityWithAccessionedSequence]
Species
Xenopus tropicalis
Compartment
Golgi lumen
Synonyms
Gal-glycan LUM, Q640B1
Locations in the PathwayBrowser
Expand all
Metabolism (Xenopus tropicalis)
Metabolism of carbohydrates (Xenopus tropicalis)
Glycosaminoglycan metabolism (Xenopus tropicalis)
Keratan sulfate/keratin metabolism (Xenopus tropicalis)
Keratan sulfate biosynthesis (Xenopus tropicalis)
B3GNT1,2,3,4,7 add GlcNAc to form Keratan-PG (Xenopus tropicalis)
Gal-glycan-protein [Golgi lumen] (Xenopus tropicalis)
lum [Golgi lumen] (Xenopus tropicalis)
B4GALTs transfer Gal to the N-glycan precursor (Xenopus tropicalis)
Gal-glycan-protein [Golgi lumen] (Xenopus tropicalis)
lum [Golgi lumen] (Xenopus tropicalis)
External Reference Information
External Reference
UniProt:Q640B1
Gene Names
lum
Reference Genes
BioGPS Gene:496415 lum
ENSEMBL:ENSXETG00000025478
KEGG Gene (Xenopus tropicalis):496415 lum
Monarch:496415 lum
NCBI Gene:496415 lum
Reference Transcript
RefSeq:NM_001011006.1 lum
Other Identifiers
496415
GO:0005515
Participates
as a member of
Gal-glycan-protein [Golgi lumen] (Xenopus tropicalis)
Other forms of this molecule
lum [Golgi lumen]
lum [Golgi lumen]
lum [Golgi lumen]
lum [Golgi lumen]
lum [Golgi lumen]
lum [Golgi lumen]
lum [Golgi lumen]
lum [lysosomal lumen]
lum [lysosomal lumen]
lum [extracellular region]
lum [extracellular region]
Inferred From
Gal-glycan LUM [Golgi lumen]
(Homo sapiens)
Modified Residues
Name
N4-(N-acetylamino)glucosyl-L-asparagine (ChEBI:63492) at unknown position
Modification
beta-D-GlcNAc-(1->2)-alpha-D-Man-(1->3)-[beta-D-Gal-(1->4)-beta-D-GlcNAc-(1->2)-alpha-D-Man-(1->6)]-beta-D-Man-(1->4)-beta-D-GlcNAcl-(1->4)-beta-D-GlcNAc-yl group
PsiMod Name
N4-(N-acetylamino)glucosyl-L-asparagine
PsiMod Definition
A protein modification that effectively converts an L-asparagine residue to N4-(N-acetylaminoglucosyl)-L-asparagine.
Cross References
RefSeq
NP_001011006.1
Ensembl
ENSXETP00000047264
,
ENSXETG00000025478
,
ENSXETT00000047264
Xenbase
XB-GENE-1004934
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