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vcan [Golgi lumen]
Stable Identifier
R-XTR-2065150
Type
Protein [EntityWithAccessionedSequence]
Species
Xenopus tropicalis
Compartment
Golgi lumen
Synonyms
D4S-VCAN, A0A6I8RTQ2
Locations in the PathwayBrowser
Expand all
Metabolism (Xenopus tropicalis)
Metabolism of carbohydrates (Xenopus tropicalis)
Glycosaminoglycan metabolism (Xenopus tropicalis)
Chondroitin sulfate/dermatan sulfate metabolism (Xenopus tropicalis)
Dermatan sulfate biosynthesis (Xenopus tropicalis)
CHST14 transfers SO4(2-) to GalNAc in dermatan or DS (Xenopus tropicalis)
CHST14 products [Golgi lumen] (Xenopus tropicalis)
D4S-PGs [Golgi lumen] (Xenopus tropicalis)
vcan [Golgi lumen] (Xenopus tropicalis)
DSPGs are secreted (Xenopus tropicalis)
DSPGs [Golgi lumen] (Xenopus tropicalis)
D4S-PGs [Golgi lumen] (Xenopus tropicalis)
vcan [Golgi lumen] (Xenopus tropicalis)
Dermatan-sulfate epimerase (DSE) converts chondroitin sulfate (CS) to dermatan sulfate (DS) (Xenopus tropicalis)
DSE,DSEL products [Golgi lumen] (Xenopus tropicalis)
D4S-PGs [Golgi lumen] (Xenopus tropicalis)
vcan [Golgi lumen] (Xenopus tropicalis)
External Reference Information
External Reference
UniProt:A0A6I8RTQ2
Gene Names
vcan
Reference Genes
BioGPS Gene:100101672 vcan
ENSEMBL:ENSXETG00000027815
KEGG Gene (Xenopus tropicalis):100101672 vcan
Monarch:100101672 vcan
NCBI Gene:100101672 vcan
Reference Transcript
RefSeq:XM_002935704.5 vcan
Other Identifiers
100101672
GO:0005509
GO:0005540
GO:0005576
GO:0007155
GO:0030246
Participates
as a member of
D4S-PGs [Golgi lumen] (Xenopus tropicalis)
Other forms of this molecule
vcan [Golgi lumen]
vcan [Golgi lumen]
vcan [Golgi lumen]
vcan [lysosomal lumen]
vcan [lysosomal lumen]
vcan [lysosomal lumen]
vcan [lysosomal lumen]
vcan [lysosomal lumen]
vcan [endoplasmic reticulum lumen]
phospho-vcan [endoplasmic reticulum lumen]
vcan [Golgi lumen]
vcan [Golgi lumen]
vcan [Golgi lumen]
vcan [Golgi lumen]
vcan [Golgi lumen]
vcan [Golgi lumen]
vcan [Golgi lumen]
vcan [Golgi lumen]
vcan [Golgi lumen]
vcan [Golgi lumen]
vcan [Golgi lumen]
vcan [extracellular region]
vcan [extracellular region]
vcan [extracellular region]
vcan [lysosomal lumen]
vcan [lysosomal lumen]
vcan [extracellular region]
vcan [extracellular region]
vcan [extracellular region]
Inferred From
D4S-VCAN [Golgi lumen]
(Homo sapiens)
Modified Residues
Name
O-xylosyl-L-serine (ChEBI:63516) at unknown position
Modification
beta-D-GalNAc-(1->4)-beta-D-IdoA-(1->3)-beta-D-GalNAc4S-(1->4)-beta-D-GlcA-(1->3)-beta-D-Gal-(1->3)-beta-D-Gal-(1->4)-beta-D-Xyl-yl group
PsiMod Name
O-xylosyl-L-serine
PsiMod Definition
A protein modification that effectively converts an L-serine residue to O3-xylosylserine.
Cross References
RefSeq
XP_002935750.2
Ensembl
ENSXETG00000027815
,
ENSXETT00000074803
,
ENSXETP00000083946
Xenbase
XB-GENE-922302
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