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gpc3 [Golgi lumen]
Stable Identifier
R-XTR-2076409
Type
Protein [EntityWithAccessionedSequence]
Species
Xenopus tropicalis
Compartment
Golgi lumen
Synonyms
Heparan(2)-GPC3, A0A6I8SBK0
Locations in the PathwayBrowser
Expand all
Metabolism (Xenopus tropicalis)
Metabolism of carbohydrates (Xenopus tropicalis)
Glycosaminoglycan metabolism (Xenopus tropicalis)
Heparan sulfate/heparin (HS-GAG) metabolism (Xenopus tropicalis)
HS-GAG biosynthesis (Xenopus tropicalis)
EXT1:EXT2 transfer GlcNAc to the heparan chain (Xenopus tropicalis)
Heparan(2)-PGs [Golgi lumen] (Xenopus tropicalis)
gpc3 [Golgi lumen] (Xenopus tropicalis)
EXT1:EXT2 transfers GlcA to heparan (Xenopus tropicalis)
Heparan(2)-PGs [Golgi lumen] (Xenopus tropicalis)
gpc3 [Golgi lumen] (Xenopus tropicalis)
External Reference Information
External Reference
UniProt:A0A6I8SBK0
Gene Names
gpc3
Reference Genes
BioGPS Gene:100135027 gpc3
ENSEMBL:ENSXETG00000032333
KEGG Gene (Xenopus tropicalis):100135027 gpc3
Monarch:100135027 gpc3
NCBI Gene:100135027 gpc3
Reference Transcript
RefSeq:XM_002932619.4 gpc3
Participates
as a member of
Heparan(2)-PGs [Golgi lumen] (Xenopus tropicalis)
Other forms of this molecule
gpc3 [plasma membrane]
gpc3 [lysosomal lumen]
gpc3 [lysosomal lumen]
gpc3 [Golgi lumen]
gpc3 [plasma membrane]
gpc3 [plasma membrane]
gpc3 [plasma membrane]
gpc3 [plasma membrane]
gpc3 [plasma membrane]
gpc3 [plasma membrane]
gpc3 [endoplasmic reticulum lumen]
phospho-gpc3 [endoplasmic reticulum lumen]
gpc3 [Golgi lumen]
gpc3 [Golgi lumen]
gpc3 [Golgi lumen]
gpc3 [Golgi lumen]
gpc3 [Golgi lumen]
gpc3 [Golgi lumen]
gpc3 [Golgi lumen]
gpc3 [Golgi lumen]
gpc3 [Golgi lumen]
gpc3 [Golgi lumen]
gpc3 [Golgi lumen]
gpc3 [Golgi lumen]
gpc3 [Golgi lumen]
gpc3 [Golgi lumen]
Inferred From
Heparan(2)-GPC3 [Golgi lumen]
(Homo sapiens)
Modified Residues
Name
O-xylosyl-L-serine (ChEBI:63648) at unknown position
Modification
alpha-D-GlcNAc-(1->4)-beta-D-GlcA-(1->4)-alpha-D-GlcNAc-(1->4)-beta-D-GlcA-(1->3)-beta-D-Gal-(1->3)-beta-D-Gal-(1->4)-beta-D-Xyl-yl group
PsiMod Name
O-xylosyl-L-serine
PsiMod Definition
A protein modification that effectively converts an L-serine residue to O3-xylosylserine.
Cross References
RefSeq
XP_002932665.2
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