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gpc4 [Golgi lumen]
Stable Identifier
R-XTR-2076440
Type
Protein [EntityWithAccessionedSequence]
Species
Xenopus tropicalis
Compartment
Golgi lumen
Synonyms
Heparan(4)-GPC4, F7CR54
Locations in the PathwayBrowser
Expand all
Metabolism (Xenopus tropicalis)
Metabolism of carbohydrates (Xenopus tropicalis)
Glycosaminoglycan metabolism (Xenopus tropicalis)
Heparan sulfate/heparin (HS-GAG) metabolism (Xenopus tropicalis)
HS-GAG biosynthesis (Xenopus tropicalis)
NDST1-4 N-deacetylates GlcNAc residues in heparan (Xenopus tropicalis)
Heparan(4)-PGs [Golgi lumen] (Xenopus tropicalis)
gpc4 [Golgi lumen] (Xenopus tropicalis)
NDST1-4 can sulfate a glucosamine residue in heparan to form heparan sulfate (HS) (Xenopus tropicalis)
Heparan(4)-PGs [Golgi lumen] (Xenopus tropicalis)
gpc4 [Golgi lumen] (Xenopus tropicalis)
External Reference Information
External Reference
UniProt:F7CR54
Gene Names
gpc4
Reference Genes
BioGPS Gene:100126682 gpc4
ENSEMBL:ENSXETG00000005400
KEGG Gene (Xenopus tropicalis):100126682 gpc4
Monarch:100126682 gpc4
NCBI Gene:100126682 gpc4
Reference Transcript
RefSeq:XM_002932588.4 gpc4
Other Identifiers
100126682
GO:0000902
GO:0001503
GO:0001702
GO:0001958
GO:0003379
GO:0005575
GO:0005576
GO:0005886
GO:0007155
GO:0007165
GO:0008104
GO:0008150
GO:0009058
GO:0009790
GO:0009826
GO:0009966
GO:0009986
GO:0014812
GO:0016020
GO:0016477
GO:0022607
GO:0030154
GO:0030166
GO:0030198
GO:0030334
GO:0030903
GO:0031012
GO:0031225
GO:0034330
GO:0036342
GO:0040007
GO:0040011
GO:0042074
GO:0045202
GO:0046658
GO:0048856
GO:0048870
GO:0048884
GO:0051216
GO:0055001
GO:0055002
GO:0060026
GO:0060027
GO:0060028
GO:0060030
GO:0060037
GO:0060536
GO:0062023
GO:0098696
GO:0099560
GO:1905475
GO:1905606
Str.281.1.S1_s_at
Participates
as a member of
Heparan(4)-PGs [Golgi lumen] (Xenopus tropicalis)
Other forms of this molecule
gpc4 [plasma membrane]
gpc4 [lysosomal lumen]
gpc4 [lysosomal lumen]
gpc4 [Golgi lumen]
gpc4 [Golgi lumen]
gpc4 [plasma membrane]
gpc4 [plasma membrane]
gpc4 [plasma membrane]
gpc4 [plasma membrane]
gpc4 [plasma membrane]
gpc4 [plasma membrane]
gpc4 [Golgi lumen]
gpc4 [Golgi lumen]
gpc4 [Golgi lumen]
gpc4 [Golgi lumen]
gpc4 [Golgi lumen]
gpc4 [Golgi lumen]
gpc4 [Golgi lumen]
gpc4 [Golgi lumen]
gpc4 [Golgi lumen]
gpc4 [Golgi lumen]
gpc4 [Golgi lumen]
gpc4 [Golgi lumen]
gpc4 [Golgi lumen]
Inferred From
Heparan(4)-GPC4 [Golgi lumen]
(Homo sapiens)
Modified Residues
Name
O-xylosyl-L-serine (ChEBI:63651) at unknown position
Modification
beta-D-GlcA-(1->4)-alpha-D-GlcNAc-(1->4)-beta-D-GlcA-(1->4)-alpha-D-GlcN-(1->4)-beta-D-GlcA-(1->3)-beta-D-Gal-(1->3)-beta-D-Gal-(1->4)-beta-D-Xyl-yl group
PsiMod Name
O-xylosyl-L-serine
PsiMod Definition
A protein modification that effectively converts an L-serine residue to O3-xylosylserine.
Cross References
RefSeq
XP_002932634.1
Ensembl
ENSXETT00000011898
,
ENSXETP00000011898
,
ENSXETG00000005400
Xenbase
XB-GENE-976427
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