Reactome | agrn [plasma membrane]

agrn [plasma membrane]

Stable Identifier

R-XTR-2076634

Type

Protein [EntityWithAccessionedSequence]

Species

Xenopus tropicalis

Compartment

plasma membrane

Synonyms

HS(1)-AGRN, A0A6I8RCQ3

Locations in the PathwayBrowser

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Metabolism (Xenopus tropicalis)

- Metabolism of carbohydrates (Xenopus tropicalis)
  - Glycosaminoglycan metabolism (Xenopus tropicalis)
    - Heparan sulfate/heparin (HS-GAG) metabolism (Xenopus tropicalis)
      - HS-GAG biosynthesis (Xenopus tropicalis)
        
        Some HSPGs are secreted to the plasma membrane (Xenopus tropicalis)
        
        HSPGs [plasma membrane] (Xenopus tropicalis)
        
        HS(1)-PGs [plasma membrane] (Xenopus tropicalis)
        
        agrn [plasma membrane] (Xenopus tropicalis)

External Reference Information

External Reference

UniProt:A0A6I8RCQ3

Gene Names

agrn

Reference Genes

BioGPS Gene:100492176 agrn

ENSEMBL:ENSXETG00000001763

Monarch:100492176 agrn

NCBI Gene:100492176 agrn

Reference Transcript

RefSeq:XM_018096014.1 agrn

Other Identifiers

100492176

GO:0005044

GO:0005509

GO:0005515

GO:0005886

GO:0006897

GO:0007213

GO:0007409

GO:0007417

GO:0007422

GO:0009952

GO:0016020

GO:0016192

GO:0023052

GO:0030154

GO:0038024

GO:0043113

GO:0043236

GO:0045202

GO:0048856

GO:0071944

Participates

as a member of

HS(1)-PGs [plasma membrane] (Xenopus tropicalis)

Other forms of this molecule

agrn [lysosomal lumen]

agrn [Golgi lumen]

agrn [plasma membrane]

agrn [extracellular region]

agrn [Golgi lumen]

Inferred From

HS(1)-AGRN [plasma membrane] (Homo sapiens)

Modified Residues

Name

O-xylosyl-L-serine (ChEBI:63652) at unknown position

Modification

beta-D-GlcA-(1->4)-alpha-D-GlcNS-(1->4)-beta-D-GlcA-(1->4)-alpha-D-GlcNS-(1->4)-beta-D-GlcA-(1->3)-beta-D-Gal-(1->3)-beta-D-Gal-(1->4)-beta-D-Xyl-yl group

PsiMod Name

O-xylosyl-L-serine

PsiMod Definition

A protein modification that effectively converts an L-serine residue to O3-xylosylserine.

Cross References

RefSeq

XP_017951503.1

Ensembl

ENSXETG00000001763, ENSXETP00000082771, ENSXETT00000075575

Xenbase

XB-GENE-953967

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