Toggle navigation
About
What is Reactome ?
News
Team
Scientific Advisory Board
Editorial Calendar
Release Calendar
Statistics
Our Logo
License Agreement
Privacy Notice
Disclaimer
Digital Preservation
Contact us
Content
Table of Contents
DOIs
Data Schema
Reactome Research Spotlight
ORCID Integration Project
COVID-19 Disease Pathways
Docs
Userguide
Pathway Browser
How do I search ?
Details Panel
Analysis Tools
Analysis Data
Analysis Gene Expression
Species Comparison
Tissue Distribution
Diseases
Cytomics
Review Status of Reactome Events
ReactomeFIViz
Developer's Zone
Graph Database
Analysis Service
Content Service
Pathways Overview
Pathway Diagrams
Icon Info
EHLD Specs & Guidelines
Icon Library Guidelines
Data Model
Computationally inferred events
FAQ
Linking to Us
Citing us
Tools
Pathway Browser
Analyse gene list
Analyse gene expression
Species Comparison
Tissue Distribution
Analysis Service
Content Service
ReactomeFIViz
Overlays
DisGeNET
Web
API
Advanced Data Search
Site Search
Community
Icon Library
Outreach
Events
Training
Publications
Partners
Contributors
Papers Citing Us
Resources Guide
Collaboration
Download
About
What is Reactome ?
News
Team
Scientific Advisory Board
Editorial Calendar
Release Calendar
Statistics
Our Logo
License Agreement
Privacy Notice
Disclaimer
Digital Preservation
Contact us
Content
Table of Contents
DOIs
Data Schema
Reactome Research Spotlight
ORCID Integration Project
COVID-19 Disease Pathways
Docs
Userguide
Pathway Browser
How do I search ?
Details Panel
Analysis Tools
Analysis Data
Analysis Gene Expression
Species Comparison
Tissue Distribution
Diseases
Cytomics
Review Status of Reactome Events
ReactomeFIViz
Developer's Zone
Graph Database
Analysis Service
Content Service
Pathways Overview
Pathway Diagrams
Icon Info
EHLD Specs & Guidelines
Icon Library Guidelines
Data Model
Computationally inferred events
FAQ
Linking to Us
Citing us
Tools
Pathway Browser
Analyse gene list
Analyse gene expression
Species Comparison
Tissue Distribution
Analysis Service
Content Service
ReactomeFIViz
Overlays
DisGeNET
Web
API
Advanced Data Search
Site Search
Community
Icon Library
Outreach
Events
Training
Publications
Partners
Contributors
Papers Citing Us
Resources Guide
Collaboration
Download
Search ...
Go!
hmgb1 [extracellular region]
Stable Identifier
R-XTR-6797422
Type
Protein [EntityWithAccessionedSequence]
Species
Xenopus tropicalis
Compartment
extracellular region
Synonyms
HC23,45-HMGB1, Q6P4N5
Locations in the PathwayBrowser
Expand all
Immune System (Xenopus tropicalis)
Innate Immune System (Xenopus tropicalis)
Toll-like Receptor Cascades (Xenopus tropicalis)
Regulation of TLR by endogenous ligand (Xenopus tropicalis)
HMGB1 binds LPS (Xenopus tropicalis)
HC23,45-HMGB1:LPS [extracellular region] (Xenopus tropicalis)
hmgb1 [extracellular region] (Xenopus tropicalis)
hmgb1 [extracellular region] (Xenopus tropicalis)
HMGB1 binds LTP (Xenopus tropicalis)
HC23,45-HMGB1:LTA [extracellular region] (Xenopus tropicalis)
hmgb1 [extracellular region] (Xenopus tropicalis)
hmgb1 [extracellular region] (Xenopus tropicalis)
HMGB1 release from cells (Xenopus tropicalis)
hmgb1 [extracellular region] (Xenopus tropicalis)
Programmed Cell Death (Xenopus tropicalis)
Regulated Necrosis (Xenopus tropicalis)
Pyroptosis (Xenopus tropicalis)
HMGB1 release from cells (Xenopus tropicalis)
hmgb1 [extracellular region] (Xenopus tropicalis)
External Reference Information
External Reference
UniProt:Q6P4N5
Gene Names
hmgb1
Reference Genes
BioGPS Gene:394834 hmgb1
ENSEMBL:ENSXETG00000019166
KEGG Gene (Xenopus tropicalis):394834 hmgb1
Monarch:394834 hmgb1
NCBI Gene:394834 hmgb1
Reference Transcript
RefSeq:NM_203895.1 hmgb1
RefSeq:XM_012956664.2 hmgb1
Other Identifiers
394834
GO:0003677
GO:0005634
GO:0005694
GO:0043226
Participates
as an input of
HMGB1 binds LTP (Xenopus tropicalis)
HMGB1 binds LPS (Xenopus tropicalis)
as a component of
HC23,45-HMGB1:LTA [extracellular region] (Xenopus tropicalis)
HC23,45-HMGB1:LPS [extracellular region] (Xenopus tropicalis)
as an output of
HMGB1 release from cells (Xenopus tropicalis)
Other forms of this molecule
hmgb1 [secretory granule lumen]
hmgb1 [ficolin-1-rich granule lumen]
hmgb1 [extracellular region]
hmgb1 [nucleoplasm]
Inferred From
HC23,45-HMGB1 [extracellular region]
(Homo sapiens)
Modified Residues
Name
Intra-chain Crosslink via L-cystine (cross-link) at 23 and 45 (in Homo sapiens)
Coordinate
23
PsiMod Name
L-cystine (cross-link)
PsiMod Definition
A protein modification that effectively cross-links two L-cysteine residues to form L-cystine.
Cross References
RefSeq
XP_012812118.1
,
NP_989226.1
Xenbase
XB-GENE-1001206
Ensembl
ENSXETG00000019166
,
ENSXETP00000041556
,
ENSXETT00000041556
© 2024
Reactome
Cite Us!
Cite Us!
Cite Us!
Warning!
Unable to extract citation. Please try again later.
Download As:
BibTeX
RIS
Text