Reactome | ints5 [nucleoplasm]

ints5 [nucleoplasm]

Stable Identifier

R-XTR-6807418

Type

Protein [EntityWithAccessionedSequence]

Species

Xenopus tropicalis

Compartment

nucleoplasm

Synonyms

INTS5, F6V4C4

Locations in the PathwayBrowser

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Gene expression (Transcription) (Xenopus tropicalis)

- RNA Polymerase II Transcription (Xenopus tropicalis)
  - RNA polymerase II transcribes snRNA genes (Xenopus tropicalis)
    - Integrator complex processes the 3' end of snRNA (Xenopus tropicalis)
      - Integrator [nucleoplasm] (Xenopus tropicalis)
        
        ints5 [nucleoplasm] (Xenopus tropicalis)
      - RNA polymerase II (phosphoserine-2,7):RPAP2:Integrator:LEC:CBCAP:capped pre-snRNA:Initiation factors:snRNA gene [nucleoplasm] (Xenopus tropicalis)
        
        RNA polymerase II (phospho-Ser2,7 CTD):RPRD1A,B:RPRD2:RPAP2:Integrator:LEC [nucleoplasm] (Xenopus tropicalis)
        
        Integrator [nucleoplasm] (Xenopus tropicalis)
        
        ints5 [nucleoplasm] (Xenopus tropicalis)
      - RNA polymerase II (phosphoserine-2,7):RPAP2:Integrator:LEC:Initiation factors:snRNA gene [nucleoplasm] (Xenopus tropicalis)
        
        RNA polymerase II (phospho-Ser2,7 CTD):RPRD1A,B:RPRD2:RPAP2:Integrator:LEC [nucleoplasm] (Xenopus tropicalis)
        
        Integrator [nucleoplasm] (Xenopus tropicalis)
        
        ints5 [nucleoplasm] (Xenopus tropicalis)
    - Pre-snRNA is elongated and capped with 7-methylguanosine (Xenopus tropicalis)
      - RNA polymerase II (phosphoserine-2,7):RPAP2:Integrator:LEC:capped pre-snRNA:Initiation factors:snRNA gene [nucleoplasm] (Xenopus tropicalis)
        
        RNA polymerase II (phospho-Ser2,7 CTD):RPRD1A,B:RPRD2:RPAP2:Integrator:LEC [nucleoplasm] (Xenopus tropicalis)
        
        Integrator [nucleoplasm] (Xenopus tropicalis)
        
        ints5 [nucleoplasm] (Xenopus tropicalis)
      - RNA polymerase II (phosphoserine-5,7):RPRD1A,B:RPRD2:RPAP2:Integrator:LEC:pre-snRNA:Initiation factors:snRNA gene [nucleoplasm] (Xenopus tropicalis)
        
        RNA polymerase II (phospho-Ser5,7 CTD):RDRP1A,B:RDRP2:RPAP2:Integrator:LEC [nucleoplasm] (Xenopus tropicalis)
        
        Integrator [nucleoplasm] (Xenopus tropicalis)
        
        ints5 [nucleoplasm] (Xenopus tropicalis)

External Reference Information

External Reference

UniProt:F6V4C4

Gene Names

ints5

Reference Genes

BioGPS Gene:100492752 ints5

ENSEMBL:ENSXETG00000005580

KEGG:xtr:100492752 ints5

Monarch:100492752 ints5

NCBI Gene:100492752 ints5

UCSC:F6V4C4 ints5

Reference Transcript

RefSeq:XM_002942978.5 ints5

Other Identifiers

100492576

100492752

GO:0003824

GO:0004553

GO:0005783

GO:0005794

GO:0005975

GO:0006491

GO:0016020

GO:0016073

GO:0016787

GO:0016798

GO:0030246

GO:0032039

GO:0033919

GO:0034472

GO:1901135

Participates

as a component of

Integrator [nucleoplasm] (Xenopus tropicalis)

Inferred From

INTS5 [nucleoplasm] (Homo sapiens)

Cross References

RefSeq

XP_002943024.2

ENSEMBL

ENSXETT00000122941, ENSXETP00000012043, ENSXETP00000107159, ENSXETG00000005580, ENSXETT00000012043

Xenbase

XB-GENE-6040594

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