Toggle navigation
About
What is Reactome ?
News
Team
Scientific Advisory Board
Funding
Editorial Calendar
Release Calendar
Statistics
Our Logo
License Agreement
Privacy Notice
Disclaimer
Digital Preservation
Contact us
Content
Table of Contents
DOIs
Data Schema
Reactome Research Spotlight
ORCID Integration Project
COVID-19 Disease Pathways
Docs
Userguide
Pathway Browser
How do I search ?
Details Panel
Analysis Tools
Analysis Data
Analysis Gene Expression
Species Comparison
Tissue Distribution
Diseases
Cytomics
Review Status of Reactome Events
ReactomeFIViz
Developer's Zone
Graph Database
Analysis Service
Content Service
Pathways Overview
Pathway Diagrams
Icon Info
EHLD Specs & Guidelines
Icon Library Guidelines
Data Model
Curator Guide
Release Documentation
Computationally inferred events
FAQ
Linking to Us
Citing us
Tools
Pathway Browser
Analyse gene list
Analyse gene expression
Species Comparison
Tissue Distribution
Analysis Service
Content Service
ReactomeFIViz
Advanced Data Search
Site Search
Community
Contribute Pathway Knowledge
Icon Library
Outreach
Events
Publications
Partners
Contributors
Resources Guide
Download
About
What is Reactome ?
News
Team
Scientific Advisory Board
Funding
Editorial Calendar
Release Calendar
Statistics
Our Logo
License Agreement
Privacy Notice
Disclaimer
Digital Preservation
Contact us
Content
Table of Contents
DOIs
Data Schema
Reactome Research Spotlight
ORCID Integration Project
COVID-19 Disease Pathways
Docs
Userguide
Pathway Browser
How do I search ?
Details Panel
Analysis Tools
Analysis Data
Analysis Gene Expression
Species Comparison
Tissue Distribution
Diseases
Cytomics
Review Status of Reactome Events
ReactomeFIViz
Developer's Zone
Graph Database
Analysis Service
Content Service
Pathways Overview
Pathway Diagrams
Icon Info
EHLD Specs & Guidelines
Icon Library Guidelines
Data Model
Curator Guide
Release Documentation
Computationally inferred events
FAQ
Linking to Us
Citing us
Tools
Pathway Browser
Analyse gene list
Analyse gene expression
Species Comparison
Tissue Distribution
Analysis Service
Content Service
ReactomeFIViz
Advanced Data Search
Site Search
Community
Contribute Pathway Knowledge
Icon Library
Outreach
Events
Publications
Partners
Contributors
Resources Guide
Download
Search ...
Go!
Sdc1 [plasma membrane]
Stable Identifier
R-RNO-2076626
Type
Protein [EntityWithAccessionedSequence]
Species
Rattus norvegicus
Compartment
plasma membrane
Synonyms
HS(5)-SDC1, P26260
Locations in the PathwayBrowser
Expand all
Metabolism (Rattus norvegicus)
Metabolism of carbohydrates (Rattus norvegicus)
Glycosaminoglycan metabolism (Rattus norvegicus)
Heparan sulfate/heparin (HS-GAG) metabolism (Rattus norvegicus)
HS-GAG biosynthesis (Rattus norvegicus)
Some HSPGs are secreted to the plasma membrane (Rattus norvegicus)
HSPGs [plasma membrane] (Rattus norvegicus)
HS(5)-PGs [plasma membrane] (Rattus norvegicus)
Sdc1 [plasma membrane] (Rattus norvegicus)
Metabolism of vitamins and cofactors (Rattus norvegicus)
Metabolism of fat-soluble vitamins (Rattus norvegicus)
Retinoid metabolism and transport (Rattus norvegicus)
CR:atREs binds apoE and HSPG (Rattus norvegicus)
CR:atREs:HSPG:apoE [plasma membrane] (Rattus norvegicus)
HSPGs [plasma membrane] (Rattus norvegicus)
HS(5)-PGs [plasma membrane] (Rattus norvegicus)
Sdc1 [plasma membrane] (Rattus norvegicus)
HSPGs [plasma membrane] (Rattus norvegicus)
HS(5)-PGs [plasma membrane] (Rattus norvegicus)
Sdc1 [plasma membrane] (Rattus norvegicus)
LRPs transport extracellular CR:atREs:HSPG:apoE to cytosol (Rattus norvegicus)
CR:atREs:HSPG:apoE [early endosome] (Rattus norvegicus)
HSPGs [plasma membrane] (Rattus norvegicus)
HS(5)-PGs [plasma membrane] (Rattus norvegicus)
Sdc1 [plasma membrane] (Rattus norvegicus)
CR:atREs:HSPG:apoE [plasma membrane] (Rattus norvegicus)
HSPGs [plasma membrane] (Rattus norvegicus)
HS(5)-PGs [plasma membrane] (Rattus norvegicus)
Sdc1 [plasma membrane] (Rattus norvegicus)
Sensory Perception (Rattus norvegicus)
Visual phototransduction (Rattus norvegicus)
Retinoid metabolism and transport (Rattus norvegicus)
CR:atREs binds apoE and HSPG (Rattus norvegicus)
CR:atREs:HSPG:apoE [plasma membrane] (Rattus norvegicus)
HSPGs [plasma membrane] (Rattus norvegicus)
HS(5)-PGs [plasma membrane] (Rattus norvegicus)
Sdc1 [plasma membrane] (Rattus norvegicus)
HSPGs [plasma membrane] (Rattus norvegicus)
HS(5)-PGs [plasma membrane] (Rattus norvegicus)
Sdc1 [plasma membrane] (Rattus norvegicus)
LRPs transport extracellular CR:atREs:HSPG:apoE to cytosol (Rattus norvegicus)
CR:atREs:HSPG:apoE [early endosome] (Rattus norvegicus)
HSPGs [plasma membrane] (Rattus norvegicus)
HS(5)-PGs [plasma membrane] (Rattus norvegicus)
Sdc1 [plasma membrane] (Rattus norvegicus)
CR:atREs:HSPG:apoE [plasma membrane] (Rattus norvegicus)
HSPGs [plasma membrane] (Rattus norvegicus)
HS(5)-PGs [plasma membrane] (Rattus norvegicus)
Sdc1 [plasma membrane] (Rattus norvegicus)
External Reference Information
External Reference
UniProt:P26260
Gene Names
Sdc1
Reference Genes
BioGPS Gene:25216 Sdc1
ENSEMBL:ENSRNOG00000059947
ENSEMBL:ENSRNOG00000059947.2 Sdc1
ENSEMBL:ENSRNOG00055005732
ENSEMBL:ENSRNOG00060003626
ENSEMBL:ENSRNOG00065005294
KEGG Gene (Rattus norvegicus):25216 Sdc1
Monarch:25216 Sdc1
NCBI Gene:25216 Sdc1
Reference Transcript
RefSeq:NM_013026.2 Sdc1
Other Identifiers
10883530
1367849_at
1376062_at
17814680
25216
5787345
5850135
6185733
6205695
6320326
6342733
6373323
6388036
6403516
6465449
6653276
6746652
A_43_P14872
GE1300951
GO:0005886
GO:0006898
GO:0009897
GO:0009986
GO:0016020
GO:0016192
GO:0023052
GO:0030154
GO:0038024
GO:0042802
GO:0048627
GO:0048856
GO:0055002
GO:0060070
GO:1903543
GO:1903553
ILMN_1362746
PH_rn_0002830
S61865_s_at
X60651mRNA_s_at
Participates
as a member of
HS(5)-PGs [plasma membrane] (Rattus norvegicus)
Other forms of this molecule
Sdc1 [plasma membrane]
Sdc1 [lysosomal lumen]
Sdc1 [lysosomal lumen]
Sdc1 [Golgi lumen]
Sdc1 [Golgi lumen]
Sdc1 [Golgi lumen]
Sdc1 [Golgi lumen]
Sdc1 [Golgi lumen]
Sdc1 [Golgi lumen]
Sdc1 [Golgi lumen]
Sdc1 [plasma membrane]
Sdc1 [plasma membrane]
Sdc1 [plasma membrane]
Sdc1 [plasma membrane]
Sdc1 [plasma membrane]
Sdc1 [Golgi lumen]
Sdc1 [Golgi lumen]
Sdc1 [Golgi lumen]
Sdc1 [Golgi lumen]
Sdc1 [Golgi lumen]
Sdc1 [Golgi lumen]
Sdc1 [Golgi lumen]
Sdc1 [Golgi lumen]
Sdc1 [Golgi lumen]
Inferred From
HS(5)-SDC1 [plasma membrane]
(Homo sapiens)
Modified Residues
Name
O-xylosyl-L-serine (ChEBI:63661) at unknown position
Modification
beta-D-IdoA-(1->4)-alpha-D-GlcNS-(1->4)-beta-D-IdoA2S-(1->4)-alpha-D-GlcNS3S-(1->4)-beta-D-GlcA-(1->3)-beta-D-Gal-(1->3)-beta-D-Gal-(1->4)-beta-D-Xyl-yl group
PsiMod Name
O-xylosyl-L-serine
PsiMod Definition
A protein modification that effectively converts an L-serine residue to O3-xylosylserine.
Cross References
RefSeq
NP_037158.1
Ensembl
ENSRNOT00000086633
,
ENSRNOP00000072283
,
ENSRNOG00000059947
PRO
P26260
RGD
3648
© 2024
Reactome
Cite Us!
Cite Us!
Cite Us!
Warning!
Unable to extract citation. Please try again later.
Download As:
BibTeX
RIS
Text