Toggle navigation
About
What is Reactome ?
News
Team
Scientific Advisory Board
Funding
Editorial Calendar
Release Calendar
Statistics
Our Logo
License Agreement
Privacy Notice
Disclaimer
Digital Preservation
Contact us
Content
Table of Contents
DOIs
Data Schema
Reactome Research Spotlight
ORCID Integration Project
COVID-19 Disease Pathways
Docs
Userguide
Pathway Browser
How do I search ?
Details Panel
Analysis Tools
Analysis Data
Analysis Gene Expression
Species Comparison
Tissue Distribution
Diseases
Cytomics
Review Status of Reactome Events
ReactomeFIViz
Developer's Zone
Graph Database
Analysis Service
Content Service
Pathways Overview
Pathway Diagrams
Icon Info
EHLD Specs & Guidelines
Icon Library Guidelines
Data Model
Curator Guide
Release Documentation
Computationally inferred events
FAQ
Linking to Us
Citing us
Tools
Pathway Browser
Analyse gene list
Analyse gene expression
Species Comparison
Tissue Distribution
Analysis Service
Content Service
ReactomeFIViz
Advanced Data Search
Site Search
Community
Contribute Pathway Knowledge
Icon Library
Outreach
Events
Publications
Partners
Contributors
Resources Guide
Download
About
What is Reactome ?
News
Team
Scientific Advisory Board
Funding
Editorial Calendar
Release Calendar
Statistics
Our Logo
License Agreement
Privacy Notice
Disclaimer
Digital Preservation
Contact us
Content
Table of Contents
DOIs
Data Schema
Reactome Research Spotlight
ORCID Integration Project
COVID-19 Disease Pathways
Docs
Userguide
Pathway Browser
How do I search ?
Details Panel
Analysis Tools
Analysis Data
Analysis Gene Expression
Species Comparison
Tissue Distribution
Diseases
Cytomics
Review Status of Reactome Events
ReactomeFIViz
Developer's Zone
Graph Database
Analysis Service
Content Service
Pathways Overview
Pathway Diagrams
Icon Info
EHLD Specs & Guidelines
Icon Library Guidelines
Data Model
Curator Guide
Release Documentation
Computationally inferred events
FAQ
Linking to Us
Citing us
Tools
Pathway Browser
Analyse gene list
Analyse gene expression
Species Comparison
Tissue Distribution
Analysis Service
Content Service
ReactomeFIViz
Advanced Data Search
Site Search
Community
Contribute Pathway Knowledge
Icon Library
Outreach
Events
Publications
Partners
Contributors
Resources Guide
Download
Search ...
Go!
Sdc3 [Golgi lumen]
Stable Identifier
R-RNO-2076427
Type
Protein [EntityWithAccessionedSequence]
Species
Rattus norvegicus
Compartment
Golgi lumen
Synonyms
Heparan(4)-SDC3, P33671
Locations in the PathwayBrowser
Expand all
Metabolism (Rattus norvegicus)
Metabolism of carbohydrates (Rattus norvegicus)
Glycosaminoglycan metabolism (Rattus norvegicus)
Heparan sulfate/heparin (HS-GAG) metabolism (Rattus norvegicus)
HS-GAG biosynthesis (Rattus norvegicus)
NDST1-4 N-deacetylates GlcNAc residues in heparan (Rattus norvegicus)
Heparan(4)-PGs [Golgi lumen] (Rattus norvegicus)
Sdc3 [Golgi lumen] (Rattus norvegicus)
NDST1-4 can sulfate a glucosamine residue in heparan to form heparan sulfate (HS) (Rattus norvegicus)
Heparan(4)-PGs [Golgi lumen] (Rattus norvegicus)
Sdc3 [Golgi lumen] (Rattus norvegicus)
External Reference Information
External Reference
UniProt:P33671
Gene Names
Sdc3
Reference Genes
BioGPS Gene:116673 Sdc3
ENSEMBL:ENSRNOG00000011927
KEGG:rno:116673 Sdc3
Monarch:116673 Sdc3
NCBI Gene:116673 Sdc3
UCSC:P33671 Sdc3
Reference Transcript
RefSeq:NM_053893.3 Sdc3
Participates
as a member of
Heparan(4)-PGs [Golgi lumen] (Rattus norvegicus)
Other forms of this molecule
Sdc3 [plasma membrane]
Sdc3 [plasma membrane]
Sdc3 [plasma membrane]
Sdc3 [plasma membrane]
Sdc3 [plasma membrane]
Sdc3 [plasma membrane]
Sdc3 [Golgi lumen]
Sdc3 [Golgi lumen]
Sdc3 [Golgi lumen]
Sdc3 [Golgi lumen]
Sdc3 [Golgi lumen]
Sdc3 [Golgi lumen]
Sdc3 [Golgi lumen]
Sdc3 [Golgi lumen]
Sdc3 [Golgi lumen]
Sdc3 [Golgi lumen]
Sdc3 [Golgi lumen]
Sdc3 [Golgi lumen]
Sdc3 [Golgi lumen]
Sdc3 [Golgi lumen]
Sdc3 [Golgi lumen]
Sdc3 [lysosomal lumen]
Sdc3 [lysosomal lumen]
Inferred From
Heparan(4)-SDC3 [Golgi lumen]
(Homo sapiens)
Modified Residues
Name
O-xylosyl-L-serine (ChEBI:63651) at unknown position
Modification
beta-D-GlcA-(1->4)-alpha-D-GlcNAc-(1->4)-beta-D-GlcA-(1->4)-alpha-D-GlcN-(1->4)-beta-D-GlcA-(1->3)-beta-D-Gal-(1->3)-beta-D-Gal-(1->4)-beta-D-Xyl-yl group
PsiMod Name
O-xylosyl-L-serine
PsiMod Definition
A protein modification that effectively converts an L-serine residue to O3-xylosylserine.
Cross References
RefSeq
NP_446345.3
PRO
P33671
GlyGen
P33671
RGD
621486
Interactors (1)
Accession
#Entities
Entities
Confidence Score
Evidence (IntAct)
UniProt:P34900 Sdc2
20
Sdc2 [plasma membrane]
(R-RNO-2076683)
Sdc2 [plasma membrane]
(R-RNO-2076661)
Sdc2 [plasma membrane]
(R-RNO-2076644)
Sdc2 [plasma membrane]
(R-RNO-2076643)
Sdc2 [plasma membrane]
(R-RNO-2076631)
Sdc2 [plasma membrane]
(R-RNO-2076665)
Sdc2 [endoplasmic reticulum lumen]
(R-RNO-8956741)
phospho-Sdc2 [endoplasmic reticulum lumen]
(R-RNO-8956945)
Sdc2 [Golgi lumen]
(R-RNO-2064109)
Sdc2 [Golgi lumen]
(R-RNO-2064132)
Sdc2 [Golgi lumen]
(R-RNO-2054101)
Sdc2 [Golgi lumen]
(R-RNO-2063988)
Sdc2 [Golgi lumen]
(R-RNO-2063997)
Sdc2 [Golgi lumen]
(R-RNO-2076443)
Sdc2 [Golgi lumen]
(R-RNO-2076356)
Sdc2 [Golgi lumen]
(R-RNO-2076603)
Sdc2 [Golgi lumen]
(R-RNO-2076607)
Sdc2 [Golgi lumen]
(R-RNO-2076576)
Sdc2 [Golgi lumen]
(R-RNO-2076361)
Sdc2 [Golgi lumen]
(R-RNO-2076397)
0.59
2
© 2024
Reactome
Cite Us!
Cite Us!
Cite Us!
Warning!
Unable to extract citation. Please try again later.
Download As:
BibTeX
RIS
Text