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STO1 [cytosol]
Stable Identifier
R-SCE-162459
Type
Protein [EntityWithAccessionedSequence]
Species
Saccharomyces cerevisiae
Compartment
cytosol
Synonyms
NCBP1, P34160
Locations in the PathwayBrowser
Expand all
Metabolism of RNA (Saccharomyces cerevisiae)
Nonsense-Mediated Decay (NMD) (Saccharomyces cerevisiae)
Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC) (Saccharomyces cerevisiae)
Decay of mRNA in SMG6:SMG5:SMG7:mRNA complex (Saccharomyces cerevisiae)
Cap Binding Complex (CBC) [cytosol] (Saccharomyces cerevisiae)
STO1 [cytosol] (Saccharomyces cerevisiae)
mRNA Cleaved by SMG6 [cytosol] (Saccharomyces cerevisiae)
Cap Binding Complex (CBC) [cytosol] (Saccharomyces cerevisiae)
STO1 [cytosol] (Saccharomyces cerevisiae)
SMG1 phosphorylates UPF1 (enhanced by Exon Junction Complex) (Saccharomyces cerevisiae)
SMG1:Phosphorylated UPF1:EJC:Translated mRNP [cytosol] (Saccharomyces cerevisiae)
Translated mRNA Complex with Premature Termination Codon Preceding Exon Junction [cytosol] (Saccharomyces cerevisiae)
mRNA Complex with a Premature Termination Codon Preceding an Exon Junction [cytosol] (Saccharomyces cerevisiae)
Cap Binding Complex (CBC) [cytosol] (Saccharomyces cerevisiae)
STO1 [cytosol] (Saccharomyces cerevisiae)
SMG1:UPF1:EJC:Translated mRNP [cytosol] (Saccharomyces cerevisiae)
Translated mRNA Complex with Premature Termination Codon Preceding Exon Junction [cytosol] (Saccharomyces cerevisiae)
mRNA Complex with a Premature Termination Codon Preceding an Exon Junction [cytosol] (Saccharomyces cerevisiae)
Cap Binding Complex (CBC) [cytosol] (Saccharomyces cerevisiae)
STO1 [cytosol] (Saccharomyces cerevisiae)
SMG6 hydrolyzes mRNA with premature termination codon (Saccharomyces cerevisiae)
Phosphorylated UPF1:SMG5:SMG7:SMG6:PP2A:Translated mRNP [cytosol] (Saccharomyces cerevisiae)
Translated mRNA Complex with Premature Termination Codon Preceding Exon Junction [cytosol] (Saccharomyces cerevisiae)
mRNA Complex with a Premature Termination Codon Preceding an Exon Junction [cytosol] (Saccharomyces cerevisiae)
Cap Binding Complex (CBC) [cytosol] (Saccharomyces cerevisiae)
STO1 [cytosol] (Saccharomyces cerevisiae)
mRNA Cleaved by SMG6 [cytosol] (Saccharomyces cerevisiae)
Cap Binding Complex (CBC) [cytosol] (Saccharomyces cerevisiae)
STO1 [cytosol] (Saccharomyces cerevisiae)
Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC) (Saccharomyces cerevisiae)
Formation of UPF1:eRF3 complex on mRNA with a premature termination codon and no Exon Junction Complex (Saccharomyces cerevisiae)
Translated mRNA Complex with Premature Termination Codon Not Preceding Exon Junction [cytosol] (Saccharomyces cerevisiae)
mRNA Complex with a Premature Termination Codon Not Preceding an Exon Junction [cytosol] (Saccharomyces cerevisiae)
Cap Binding Complex (CBC) [cytosol] (Saccharomyces cerevisiae)
STO1 [cytosol] (Saccharomyces cerevisiae)
UPF1:eRF3 Complex on Translated mRNA [cytosol] (Saccharomyces cerevisiae)
Translated mRNA Complex with Premature Termination Codon Not Preceding Exon Junction [cytosol] (Saccharomyces cerevisiae)
mRNA Complex with a Premature Termination Codon Not Preceding an Exon Junction [cytosol] (Saccharomyces cerevisiae)
Cap Binding Complex (CBC) [cytosol] (Saccharomyces cerevisiae)
STO1 [cytosol] (Saccharomyces cerevisiae)
Processing of Capped Intron-Containing Pre-mRNA (Saccharomyces cerevisiae)
Transport of Mature Transcript to Cytoplasm (Saccharomyces cerevisiae)
Transport of Mature mRNA derived from an Intron-Containing Transcript (Saccharomyces cerevisiae)
Transport of the export-competent mRNP complex through the NPC (Saccharomyces cerevisiae)
NPC:NXF1:NXT1:EJC:CBC:mRNA [cytosol] (Saccharomyces cerevisiae)
Cap Binding Complex (CBC) [cytosol] (Saccharomyces cerevisiae)
STO1 [cytosol] (Saccharomyces cerevisiae)
External Reference Information
External Reference
UniProt:P34160
Gene Names
STO1
Reference Genes
BioGPS Gene:855155 STO1
ENSEMBL:YMR125W
KEGG Gene (Saccharomyces cerevisiae (strain RM11-1a)):YMR125W STO1
Monarch:855155 STO1
NCBI Gene:855155 STO1
SGD:YMR125W
Reference Transcript
RefSeq:NM_001182626.1 STO1
Other Identifiers
1771887_at
855155
9524_at
GO:0000184
GO:0000243
GO:0000339
GO:0000398
GO:0000956
GO:0003674
GO:0003723
GO:0003729
GO:0005515
GO:0005575
GO:0005634
GO:0005737
GO:0005844
GO:0005845
GO:0005846
GO:0006366
GO:0006370
GO:0006397
GO:0006401
GO:0006406
GO:0006970
GO:0008150
GO:0008380
GO:0015931
GO:0016070
GO:0031053
GO:0031124
GO:0042789
GO:0045292
GO:0048471
GO:0051028
GO:0051169
Participates
as a component of
Cap Binding Complex (CBC) [cytosol] (Saccharomyces cerevisiae)
Other forms of this molecule
STO1 [nucleoplasm]
Inferred From
NCBP1 [cytosol]
(Homo sapiens)
Cross References
RefSeq
NP_013844.2
PRO
P34160
PDB
6N7P
,
3UKY
Interactors (7)
Accession
#Entities
Entities
Confidence Score
Evidence (IntAct)
UniProt:Q08920
2
NCBP2 [cytosol]
(R-SCE-162458)
NCBP2 [nucleoplasm]
(R-SCE-51463)
0.818
25
UniProt:Q02821
2
SRP1 [cytosol]
(R-SCE-180612)
SRP1 [cytosol]
(R-SCE-9734672)
0.69
12
UniProt:P36036 YRA2
0.564
6
UniProt:Q05900
1
YHC1 [nucleoplasm]
(R-SCE-8865876)
0.564
5
UniProt:P53617 NRD1
0.527
3
UniProt:P10592
20
SSA2 [cytosol]
(R-SCE-264476)
SSA2 [nucleoplasm]
(R-SCE-5082380)
SSA2 [ficolin-1-rich granule lumen]
(R-SCE-6801512-3)
SSA2 [ficolin-1-rich granule lumen]
(R-SCE-6801496-3)
SSA2 [ficolin-1-rich granule lumen]
(R-SCE-6801494)
SSA2 [extracellular region]
(R-SCE-6805872-3)
SSA2 [extracellular region]
(R-SCE-6806500-3)
SSA2 [extracellular region]
(R-SCE-6805936)
SSA2 [secretory granule lumen]
(R-SCE-6801530)
SSA2 [secretory granule lumen]
(R-SCE-6801472-3)
SSA2 [cytosol]
(R-SCE-3371410-3)
SSA2 [cytosol]
(R-SCE-3371408-3)
SSA2 [cytosol]
(R-SCE-6792602-3)
SSA2 [nucleoplasm]
(R-SCE-6792605-3)
SSA2 [nucleoplasm]
(R-SCE-912480-3)
SSA2 [nucleoplasm]
(R-SCE-5082367-3)
SSA2 [nucleoplasm]
(R-SCE-5252082-3)
SSA2 [nucleoplasm]
(R-SCE-5252088-3)
SSA2 [nucleoplasm]
(R-SCE-5252009-3)
SSA2 [cytosol]
(R-SCE-5251948-3)
0.527
2
UniProt:P07260
1
CDC33 [cytosol]
(R-SCE-72578)
0.527
2
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